Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for lnpa

Gene Name Gene ID Reads Annotation
lnpa ENSDARG00000063646, ENSDARG00000115902 2373 limb and neural patterns a [Source:ZFIN;Acc:ZDB-GENE-030131-4960]










Genes with expression patterns similar to lnpa

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lnpa ENSDARG00000063646, ENSDARG00000115902 2373 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 limb and neural patterns a [Source:ZFIN;Acc:ZDB-GENE-030131-4960]
2. rp42-pen rp42-pen 3395 3.36 - 0.928 0.754 - - 0.841 0.837 - -
3. zgc:158296 ENSDARG00000070923 3935 3.248 - 0.867 - - 0.730 0.793 0.858 - - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
4. tgm1l1 ENSDARG00000102106 1437 3.175 - 0.899 - - 0.713 0.757 0.806 - - transglutaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-139]
5. hhatla ENSDARG00000039051 6598 2.66 - 0.918 - - 0.833 - 0.909 - - hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
6. DNAJA4 ENSDARG00000051762 5657 2.643 - 0.900 - - - 0.847 0.896 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
7. ryr3 ENSDARG00000071331 6795 2.625 - 0.918 - - - 0.775 0.932 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
8. mybphb ENSDARG00000003081 5208 2.616 - 0.950 - - 0.708 - 0.958 - - myosin binding protein Hb [Source:ZFIN;Acc:ZDB-GENE-030131-9794]
9. mef2aa ENSDARG00000031756 2699 2.615 - 0.919 - - - 0.784 0.912 - - myocyte enhancer factor 2aa [Source:ZFIN;Acc:ZDB-GENE-990415-163]
10. MYOT ENSDARG00000076312 1791 2.6 - 0.930 - - - 0.762 0.908 - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
11. klhl40a ENSDARG00000039052 2537 2.583 - 0.924 - - - 0.749 0.910 - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
12. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 2.574 - 0.916 - - - 0.801 0.857 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
13. fitm1 ENSDARG00000056464 1759 2.557 - 0.907 - - - 0.783 0.867 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
14. ntmt1 ENSDARG00000022399 5779 2.557 - 0.924 - - - 0.794 0.839 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
15. si:ch211-242b18.1 ENSDARG00000054723 2929 2.555 - 0.912 - - - 0.759 0.884 - - si:ch211-242b18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1518]
16. CR847973.1 ENSDARG00000115516 8754 2.555 - 0.794 - - - 0.807 0.954 - -
17. gypc ENSDARG00000041546 1487 2.544 - 0.859 - - - 0.819 0.866 - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
18. pbxip1a ENSDARG00000071015 4960 2.543 - 0.918 0.732 - - - 0.893 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
19. cfl2 ENSDARG00000014106 8051 2.542 - 0.962 0.770 - - - 0.810 - - cofilin 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1815]
20. limch1a ENSDARG00000074275 2981 2.542 - 0.859 - - - 0.778 0.905 - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
21. stac3 ENSDARG00000098883 1765 2.538 - 0.891 - - - 0.737 0.910 - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
22. txlnbb ENSDARG00000076241 6396 2.532 - 0.895 - - - 0.801 0.836 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
23. chrna1 ENSDARG00000009021 2931 2.53 - 0.897 - - - 0.719 0.914 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
24. sptb ENSDARG00000030490 7128 2.529 - 0.904 - - - 0.700 0.925 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
25. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 2.526 - 0.841 - - - 0.865 0.820 - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
26. srpk3 ENSDARG00000005916 1546 2.525 - 0.884 - - 0.763 - 0.878 - - SRSF protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-101025-2]
27. TRIM63 TRIM63 1600 2.517 - 0.825 - - - 0.766 0.926 - -
28. cap2 ENSDARG00000104478 3266 2.508 - 0.915 - - - 0.757 0.836 - - CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
29. PTPLA PTPLA 4044 2.507 - 0.854 - - - 0.784 0.869 - -
30. alpk3a ENSDARG00000078989 1992 2.496 - 0.908 - - - 0.732 0.856 - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
31. myhc4 ENSDARG00000035438 1322 2.494 - 0.828 - - - 0.767 0.899 - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
32. TMPO TMPO 3264 2.491 - 0.861 0.717 - - - 0.913 - -
33. cacng1 cacng1 3118 2.49 - 0.944 - - - 0.750 0.796 - -
34. prx ENSDARG00000017246 6183 2.49 - 0.806 0.768 - - - 0.916 - - periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
35. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 2.489 - 0.882 - - 0.774 - 0.833 - - paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
36. trdn ENSDARG00000041779 4283 2.486 - 0.827 0.727 - - - 0.932 - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
37. EHBP1L1 EHBP1L1 2500 2.48 - 0.863 0.719 - - - 0.898 - -
38. jph1a ENSDARG00000058603 2852 2.472 - 0.851 - - - 0.734 0.887 - - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
39. alpk2 ENSDARG00000079637 1483 2.47 - 0.874 - - - 0.804 0.792 - - alpha-kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1868]
40. myod1 ENSDARG00000030110 6019 2.464 - 0.863 - - - 0.723 0.878 - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
41. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 2.461 - 0.716 - - - 0.780 0.965 - - LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
42. MYOM3 2720 2.457 - 0.882 - - - 0.700 0.875 - - myomesin 3, transcript variant X2
43. NRAP ENSDARG00000009341 3565 2.455 - 0.827 - - - 0.734 0.894 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
44. enah ENSDARG00000032049 1526 2.441 - 0.867 - - - 0.710 0.864 - - enabled homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010323-11]
45. xirp2a ENSDARG00000071113 7113 2.436 - 0.842 - - - 0.708 0.886 - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
46. FRMD5 ENSDARG00000075942 569 2.427 - 0.749 - - - 0.822 0.856 - - FERM domain containing 5 [Source:HGNC Symbol;Acc:HGNC:28214]
47. ube2d3 ENSDARG00000038473 4096 2.426 - - - - - 0.749 0.808 - 0.869 ubiquitin-conjugating enzyme E2D 3 [Source:ZFIN;Acc:ZDB-GENE-030131-551]
48. myoz2a ENSDARG00000012311 1373 2.414 - 0.840 - - - 0.705 0.869 - - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
49. ablim2 ENSDARG00000055223 1934 2.409 - - - 0.738 - 0.806 0.865 - - actin binding LIM protein family, member 2 [Source:ZFIN;Acc:ZDB-GENE-100316-5]
50. mef2d ENSDARG00000040237 6144 2.408 - 0.895 - - - 0.760 0.753 - - myocyte enhancer factor 2d [Source:ZFIN;Acc:ZDB-GENE-990415-164]
51. mybpc2b ENSDARG00000021265 9618 2.4 - 0.838 0.706 - - - 0.856 - - myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
52. obsl1b ENSDARG00000077388 2511 2.38 - 0.867 - - - 0.703 0.810 - - obscurin-like 1b [Source:ZFIN;Acc:ZDB-GENE-050809-29]
53. PTP4A3 ENSDARG00000039997 3814 2.369 - 0.761 - - - 0.864 0.744 - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
54. lpl ENSDARG00000087697 2578 2.363 - 0.828 - - - 0.745 0.790 - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
55. asb2a asb2a 845 2.355 - 0.812 - - - 0.712 0.831 - -
56. phex ENSDARG00000062363 1413 2.352 - - 0.723 - - 0.731 0.898 - - phosphate regulating endopeptidase homolog, X-linked [Source:ZFIN;Acc:ZDB-GENE-030103-2]
57. si:ch211-255p10.3 ENSDARG00000096616 8336 2.35 - - 0.736 - - 0.780 0.834 - - si:ch211-255p10.3 [Source:ZFIN;Acc:ZDB-GENE-121214-339]
58. tomm34 ENSDARG00000001557 1874 2.342 - 0.813 - - - 0.719 0.810 - - translocase of outer mitochondrial membrane 34 [Source:ZFIN;Acc:ZDB-GENE-030131-2081]
59. mdh1b ENSDARG00000018008 3196 2.34 - 0.715 - - - 0.705 0.920 - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
60. smarcd3a ENSDARG00000038786 2894 2.336 - 0.827 - - - 0.738 0.771 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3a [Source:ZFIN;Acc:ZDB-GENE-070912-491]
61. znf648 ENSDARG00000104823 1918 2.332 - 0.843 - - - 0.772 0.717 - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
62. DUSP27 ENSDARG00000099889 1197 2.329 - 0.825 - - - 0.718 0.786 - - dual specificity phosphatase 27 [Source:ZFIN;Acc:ZDB-GENE-140513-1]
63. gstm gstm 4064 2.275 - 0.787 - - - - 0.721 - 0.767
64. synpo2lb ENSDARG00000078696 2361 2.275 - 0.702 - - - 0.728 0.845 - - synaptopodin 2-like b [Source:ZFIN;Acc:ZDB-GENE-090828-5]
65. LIMD1 LIMD1 1306 2.258 - 0.726 - - - 0.711 0.821 - -
66. pa2g4b ENSDARG00000070657 7999 2.254 - 0.829 - - - 0.717 0.708 - - proliferation-associated 2G4, b [Source:ZFIN;Acc:ZDB-GENE-030131-2182]
67. rps8a ENSDARG00000055996 2785 2.245 - 0.705 - - - - 0.754 - 0.786 ribosomal protein S8a [Source:ZFIN;Acc:ZDB-GENE-030131-8626]
68. trim101 ENSDARG00000018264 827 2.242 - 0.779 - - - 0.711 0.752 - - tripartite motif containing 101 [Source:ZFIN;Acc:ZDB-GENE-040801-100]
69. col4a2 ENSDARG00000104110 947 2.188 - 0.755 - - - 0.729 0.704 - - collagen, type IV, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-070725-3]
70. pdss1 ENSDARG00000017910 1290 2.186 - 0.737 - - - 0.735 0.714 - - prenyl (decaprenyl) diphosphate synthase, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4430]
71. ryr1b ENSDARG00000023797 5693 1.874 - 0.940 - - - - 0.934 - - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
72. C13H10orf71 3489 1.87 - 0.942 - - - - 0.928 - - chromosome 13 C10orf71 homolog
73. srl ENSDARG00000104587 11126 1.856 - 0.911 - - - - 0.945 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
74. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 1.839 - 0.938 - - - - 0.901 - - ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
75. nmrk2 ENSDARG00000067848 10293 1.825 - 0.891 - - - - 0.934 - - nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]
76. nol7 ENSDARG00000075795 1559 1.81 - 0.900 - - - - - - 0.910 nucleolar protein 7 [Source:ZFIN;Acc:ZDB-GENE-030131-9100]
77. BX294434.1 ENSDARG00000061272 6493 1.809 - 0.885 - - - - 0.924 - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
78. rras2 ENSDARG00000036252, ENSDARG00000111642 1714 1.808 - 0.881 - - - - - - 0.927 RAS related 2 [Source:ZFIN;Acc:ZDB-GENE-050417-352]
79. tnnc1b ENSDARG00000037539 13945 1.807 - 0.884 - - - - 0.923 - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
80. znf106a ENSDARG00000016651 6049 1.807 - 0.909 - - - - 0.898 - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
81. hapln1a ENSDARG00000089769 12334 1.8 - 0.904 - - - - 0.896 - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
82. six1b ENSDARG00000026473 1908 1.795 - 0.920 - - - - 0.875 - - SIX homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2308]
83. mafa ENSDARG00000015890 2140 1.786 - - - - - 0.892 0.894 - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog a (paralog a) [Source:ZFIN;Acc:ZDB-GENE-010605-2]
84. tnw 16679 1.785 - 0.847 - - - - 0.938 - - tenascin W, transcript variant X2
85. vwde ENSDARG00000103443 5758 1.783 - 0.867 - - - - 0.916 - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
86. klhl21 ENSDARG00000039255 2550 1.773 - 0.870 - - - - 0.903 - - kelch-like family member 21 [Source:ZFIN;Acc:ZDB-GENE-040426-2627]
87. pygmb ENSDARG00000013317 5454 1.773 - 0.824 - - - - 0.949 - - phosphorylase, glycogen, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-1206]
88. CR392006.1 CR392006.1 1401 1.769 - 0.875 - - - - 0.894 - -
89. pygma ENSDARG00000055518 15972 1.765 - 0.880 - - - - 0.885 - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
90. CU633479.5 ENSDARG00000114818 1815 1.759 - 0.877 - - - - 0.882 - -
91. myoz2b ENSDARG00000037266 2139 1.755 - 0.841 - - - - 0.914 - - myozenin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1853]
92. FHOD3_1 FHOD3_1 983 1.755 - 0.866 - - - - 0.889 - -
93. dyrk2 ENSDARG00000094646 2163 1.754 - 0.859 - - - - 0.895 - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2804]
94. si:ch211-114n24.7 si:ch211-114n24.7 2544 1.754 - 0.904 - - - - 0.850 - -
95. sh3bgr ENSDARG00000021633 3498 1.75 - 0.858 - - - - 0.892 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
96. usp28 ENSDARG00000008880 1850 1.748 - 0.851 - - - - 0.897 - - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
97. cand2 ENSDARG00000005749, ENSDARG00000109268, ENSDARG00000112192 356 1.748 - 0.879 - - - - 0.869 - - cullin-associated and neddylation-dissociated 2 (putative) [Source:ZFIN;Acc:ZDB-GENE-060503-645]
98. myom1a ENSDARG00000061249 10230 1.748 - - - - - 0.815 0.933 - - myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
99. ITGB1BP2 ENSDARG00000030176 2472 1.747 - 0.899 - - - - 0.848 - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
100. tnnt2d ENSDARG00000002988 7590 1.745 - 0.807 - - - - 0.938 - - troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]

There are 1821 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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