Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for lmx1bb

Gene Name Gene ID Reads Annotation
lmx1bb ENSDARG00000068365 627 LIM homeobox transcription factor 1, beta b [Source:ZFIN;Acc:ZDB-GENE-050114-2]










Genes with expression patterns similar to lmx1bb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lmx1bb ENSDARG00000068365 627 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 LIM homeobox transcription factor 1, beta b [Source:ZFIN;Acc:ZDB-GENE-050114-2]
2. nr1d4b ENSDARG00000059370 243 1.784 0.797 0.987 - - - - - - - nuclear receptor subfamily 1, group D, member 4b [Source:ZFIN;Acc:ZDB-GENE-080403-6]
3. poc5 ENSDARG00000059982 569 1.743 0.743 - 1.000 - - - - - - POC5 centriolar protein homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-060526-135]
4. ppfia4 ENSDARG00000053205 276 1.738 0.758 0.980 - - - - - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 [Source:ZFIN;Acc:ZDB-GENE-070720-14]
5. scn4ba ENSDARG00000099031 1634 1.717 0.754 0.963 - - - - - - - sodium channel, voltage-gated, type IV, beta a [Source:ZFIN;Acc:ZDB-GENE-070615-18]
6. clvs2 ENSDARG00000053122 1390 1.716 0.735 0.981 - - - - - - - clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
7. CABZ01021433.1 ENSDARG00000105696 74 1.693 - 0.920 - - - - 0.773 - - si:cabz01021433.2 [Source:NCBI gene;Acc:100333857]
8. add3b ENSDARG00000056250, ENSDARG00000114699 119 1.664 - 0.883 - - - 0.781 - - - adducin 3 (gamma) b [Source:ZFIN;Acc:ZDB-GENE-080718-6]
9. scrt1a ENSDARG00000100821 2687 1.625 0.707 0.918 - - - - - - - scratch family zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-080219-30]
10. atp6ap1a ENSDARG00000041417 898 1.611 0.785 0.826 - - - - - - - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
11. rhbdd2 ENSDARG00000092463 937 1.596 0.855 0.741 - - - - - - - rhomboid domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-091204-359]
12. SNORD27 SNORD27 181 1.591 - 0.872 - - - 0.719 - - -
13. SV2A ENSDARG00000059945 1278 1.587 0.749 0.838 - - - - - - - synaptic vesicle glycoprotein 2A [Source:ZFIN;Acc:ZDB-GENE-131001-1]
14. kctd7 ENSDARG00000061580 44 1.565 - 0.779 - - - 0.786 - - - potassium channel tetramerization domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060804-2]
15. cenpn ENSDARG00000043640 330 1.492 - - - 0.735 - 0.757 - - - centromere protein N [Source:ZFIN;Acc:ZDB-GENE-030616-408]
16. si:dkey-34m19.3 ENSDARG00000078814 321 1.484 - 0.710 - - - 0.774 - - - si:dkey-34m19.3 [Source:ZFIN;Acc:ZDB-GENE-030131-2206]
17. DAGLB ENSDARG00000089888 304 1.463 - 0.707 - - - - 0.756 - - diacylglycerol lipase, beta [Source:ZFIN;Acc:ZDB-GENE-070619-2]
18. PROCA1 ENSDARG00000069823 343 1.447 0.705 0.742 - - - - - - - protein interacting with cyclin A1 [Source:ZFIN;Acc:ZDB-GENE-110418-1]
19. Sep-03 Sep-03 1124 1.446 0.707 0.739 - - - - - - -
20. PRIMPOL ENSDARG00000033273, ENSDARG00000111555 918 1 - - 1.000 - - - - - - primase and polymerase (DNA-directed) [Source:ZFIN;Acc:ZDB-GENE-051113-100]
21. C5H2orf68 C5H2orf68 849 1 - - 1.000 - - - - - -
22. hyi ENSDARG00000030166 1199 1 - - 1.000 - - - - - - hydroxypyruvate isomerase [Source:ZFIN;Acc:ZDB-GENE-040426-1273]
23. trps1 ENSDARG00000104082 918 1 - - 1.000 - - - - - - trichorhinophalangeal syndrome I [Source:ZFIN;Acc:ZDB-GENE-030131-8404]
24. tbccd1 ENSDARG00000056886, ENSDARG00000114427 1389 1 - - 1.000 - - - - - - TBCC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041210-222]
25. arl15b ENSDARG00000057995, ENSDARG00000109775 1243 1 - - 1.000 - - - - - - ADP-ribosylation factor-like 15b [Source:ZFIN;Acc:ZDB-GENE-080813-2]
26. zdhhc6 ENSDARG00000075721 1494 1 - - 1.000 - - - - - - zinc finger, DHHC-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3189]
27. pde12 ENSDARG00000030964 615 1 - - 1.000 - - - - - - phosphodiesterase 12 [Source:ZFIN;Acc:ZDB-GENE-060519-25]
28. taok2b_1 ENSDARG00000100620 2082 1 - - 1.000 - - - - - - TAO kinase 2b [Source:ZFIN;Acc:ZDB-GENE-110603-3]
29. FUZ ENSDARG00000079730 821 1 - - 1.000 - - - - - - fuzzy planar cell polarity protein [Source:ZFIN;Acc:ZDB-GENE-090609-2]
30. slc4a2b ENSDARG00000052330 1900 1 - - 1.000 - - - - - - solute carrier family 4 (anion exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-030429-14]
31. egr2a ENSDARG00000044098 1101 1 - - 1.000 - - - - - - early growth response 2a [Source:ZFIN;Acc:ZDB-GENE-030723-6]
32. wnt7bb ENSDARG00000071107 1158 1 - - 1.000 - - - - - - wingless-type MMTV integration site family, member 7Bb [Source:ZFIN;Acc:ZDB-GENE-081006-1]
33. METTL18 ENSDARG00000074588 918 1 - - 1.000 - - - - - - methyltransferase like 18 [Source:HGNC Symbol;Acc:HGNC:28793]
34. zbtb33 ENSDARG00000071467, ENSDARG00000112085 1425 0.999 - - 0.999 - - - - - - zinc finger and BTB domain containing 33 [Source:ZFIN;Acc:ZDB-GENE-070412-3]
35. rad54l ENSDARG00000018623 837 0.999 - - 0.999 - - - - - - RAD54 like [Source:ZFIN;Acc:ZDB-GENE-040426-968]
36. AL772300.3 AL772300.3 1752 0.999 - - 0.999 - - - - - -
37. lipg ENSDARG00000031044 1516 0.999 - - 0.999 - - - - - - lipase, endothelial [Source:ZFIN;Acc:ZDB-GENE-040426-699]
38. eif3k ENSDARG00000068289 1102 0.999 - - 0.999 - - - - - - eukaryotic translation initiation factor 3, subunit K [Source:ZFIN;Acc:ZDB-GENE-050417-45]
39. pgam5 ENSDARG00000035608 4044 0.999 - - 0.999 - - - - - - PGAM family member 5, serine/threonine protein phosphatase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-683]
40. si:ch211-266d19.4 ENSDARG00000012642 1251 0.999 - - 0.999 - - - - - - si:ch211-266d19.4 [Source:ZFIN;Acc:ZDB-GENE-091204-74]
41. si:ch211-216l23.2 ENSDARG00000069122, ENSDARG00000115838 1365 0.999 - - 0.999 - - - - - - si:ch211-216l23.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3806]
42. CABZ01034082.1 ENSDARG00000099583 2237 0.999 - - 0.999 - - - - - -
43. dnajc2 ENSDARG00000070477 902 0.999 - - 0.999 - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1912]
44. DACT3_1 DACT3_1 1235 0.999 - - 0.999 - - - - - -
45. plrg1 ENSDARG00000037283, ENSDARG00000110921 1552 0.999 - - 0.999 - - - - - - pleiotropic regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2787]
46. GSG2 GSG2 1162 0.999 - - 0.999 - - - - - -
47. map3k3 ENSDARG00000060348 1482 0.999 - - 0.999 - - - - - - mitogen-activated protein kinase kinase kinase 3 [Source:ZFIN;Acc:ZDB-GENE-070910-1]
48. acss2 ENSDARG00000037781, ENSDARG00000112371 3100 0.999 - - 0.999 - - - - - - acyl-CoA synthetase short chain family member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-388]
49. suz12a ENSDARG00000070256 2229 0.999 - - 0.999 - - - - - - SUZ12, polycomb repressive complex 2 subunit a [Source:ZFIN;Acc:ZDB-GENE-040801-36]
50. rab35 rab35 1287 0.999 - - 0.999 - - - - - -
51. rnmt ENSDARG00000070553 1743 0.998 - - 0.998 - - - - - - RNA (guanine-7-) methyltransferase [Source:ZFIN;Acc:ZDB-GENE-041008-25]
52. brd8 ENSDARG00000025071 2605 0.998 - - 0.998 - - - - - - bromodomain containing 8 [Source:ZFIN;Acc:ZDB-GENE-030722-10]
53. fam118b ENSDARG00000078983 1822 0.998 - - 0.998 - - - - - - family with sequence similarity 118, member B [Source:ZFIN;Acc:ZDB-GENE-060810-6]
54. matr3l1.1_1 ENSDARG00000000394, ENSDARG00000001162 1860 0.998 - - 0.998 - - - - - - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
55. sypl2b ENSDARG00000000690 2006 0.998 - - 0.998 - - - - - - synaptophysin-like 2b [Source:ZFIN;Acc:ZDB-GENE-050417-309]
56. si:ch211-10d23.5 ENSDARG00000095510 2632 0.998 - - 0.998 - - - - - - si:ch211-10d23.5 [Source:ZFIN;Acc:ZDB-GENE-090313-10]
57. aup1 ENSDARG00000092609 2431 0.998 - - 0.998 - - - - - - ancient ubiquitous protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3375]
58. tbp ENSDARG00000014994 1591 0.998 - - 0.998 - - - - - - TATA box binding protein [Source:ZFIN;Acc:ZDB-GENE-030616-563]
59. ptbp2a ENSDARG00000101947 1921 0.998 - - 0.998 - - - - - - polypyrimidine tract binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050320-141]
60. abca3b ENSDARG00000100524 2416 0.998 - - 0.998 - - - - - - ATP-binding cassette, sub-family A (ABC1), member 3b [Source:ZFIN;Acc:ZDB-GENE-050517-2]
61. slc39a10 ENSDARG00000005823 2634 0.998 - - 0.998 - - - - - - solute carrier family 39 (zinc transporter), member 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1157]
62. PYURF ENSDARG00000045773 4576 0.998 - - 0.998 - - - - - - PIGY upstream reading frame [Source:HGNC Symbol;Acc:HGNC:44317]
63. cops5 ENSDARG00000057624 1485 0.998 - - 0.998 - - - - - - COP9 signalosome subunit 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1686]
64. sh3bgrl3 ENSDARG00000098075 3071 0.998 - - 0.998 - - - - - - SH3 domain binding glutamate-rich protein like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1059]
65. dnaja3a ENSDARG00000058494, ENSDARG00000111151 2497 0.997 - - 0.997 - - - - - - DnaJ (Hsp40) homolog, subfamily A, member 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7837]
66. serpine2 ENSDARG00000029353 2274 0.997 - - 0.997 - - - - - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-848]
67. hmbox1a ENSDARG00000027082 2569 0.997 - - 0.997 - - - - - - homeobox containing 1a [Source:ZFIN;Acc:ZDB-GENE-050913-89]
68. ddx3 ddx3 4076 0.997 - - 0.997 - - - - - -
69. ENSDARG00000087348 ENSDARG00000087348 2870 0.996 - - 0.996 - - - - - -
70. pip5k2 pip5k2 5743 0.996 - - 0.996 - - - - - -
71. dnmt1 ENSDARG00000030756 2741 0.995 - - 0.995 - - - - - - DNA (cytosine-5-)-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-990714-15]
72. psma6b ENSDARG00000013966 4410 0.995 - - 0.995 - - - - - - proteasome subunit alpha 6b [Source:ZFIN;Acc:ZDB-GENE-040718-329]
73. cops7a ENSDARG00000022788, ENSDARG00000112421 5302 0.995 - - 0.995 - - - - - - COP9 constitutive photomorphogenic homolog subunit 7A [Source:ZFIN;Acc:ZDB-GENE-030131-8680]
74. cdk2 ENSDARG00000026577 2835 0.995 - - 0.995 - - - - - - cyclin-dependent kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2741]
75. rad23b ENSDARG00000021550 2575 0.995 - - 0.995 - - - - - - RAD23 homolog B, nucleotide excision repair protein [Source:ZFIN;Acc:ZDB-GENE-040426-1487]
76. msxc msxc 3142 0.995 - - 0.995 - - - - - -
77. ndufv3 ENSDARG00000090389 4829 0.992 - - 0.992 - - - - - - NADH:ubiquinone oxidoreductase subunit V3 [Source:ZFIN;Acc:ZDB-GENE-030131-6500]
78. zgc:162944 ENSDARG00000069846, ENSDARG00000112524 3898 0.991 - - 0.991 - - - - - - zgc:162944 [Source:ZFIN;Acc:ZDB-GENE-070424-75]
79. wbp2 ENSDARG00000056605 101 0.99 - 0.990 - - - - - - - WW domain binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050522-137]
80. si:ch1073-286c18.5 ENSDARG00000098567 7391 0.99 - - 0.990 - - - - - - si:ch1073-286c18.5 [Source:ZFIN;Acc:ZDB-GENE-121214-240]
81. mettl22 ENSDARG00000077863 81 0.99 - 0.990 - - - - - - - methyltransferase like 22 [Source:ZFIN;Acc:ZDB-GENE-081022-70]
82. clic4 ENSDARG00000022995 6064 0.989 - - 0.989 - - - - - - chloride intracellular channel 4 [Source:ZFIN;Acc:ZDB-GENE-030326-3]
83. gnl3 ENSDARG00000006219 3854 0.989 - - 0.989 - - - - - - guanine nucleotide binding protein-like 3 (nucleolar) [Source:ZFIN;Acc:ZDB-GENE-030131-616]
84. gnb4b ENSDARG00000115383 7457 0.989 - - 0.989 - - - - - - guanine nucleotide binding protein (G protein), beta polypeptide 4b [Source:ZFIN;Acc:ZDB-GENE-041114-167]
85. stip1 ENSDARG00000004906 7742 0.988 - - 0.988 - - - - - - stress-induced phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-041121-17]
86. tle2 5014 0.988 - - 0.988 - - - - - - transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila), transcript variant X4
87. sepw2a 8597 0.987 - - 0.987 - - - - - - selenoprotein W, 2a
88. kmt2cb ENSDARG00000075560 4816 0.985 - - 0.985 - - - - - - lysine (K)-specific methyltransferase 2Cb [Source:ZFIN;Acc:ZDB-GENE-070705-340]
89. sri ENSDARG00000058593 13152 0.985 - - 0.985 - - - - - - sorcin [Source:ZFIN;Acc:ZDB-GENE-040426-1356]
90. HEPHL1 HEPHL1 309 0.985 - 0.985 - - - - - - -
91. kctd5 kctd5 13455 0.984 - - 0.984 - - - - - -
92. gpc1a ENSDARG00000019341, ENSDARG00000110513 935 0.983 - 0.983 - - - - - - - glypican 1a [Source:ZFIN;Acc:ZDB-GENE-051120-147]
93. celf1 ENSDARG00000005315 5598 0.982 - - 0.982 - - - - - - cugbp, Elav-like family member 1 [Source:ZFIN;Acc:ZDB-GENE-000501-1]
94. si:dkey-238c7.12 si:dkey-238c7.12 6600 0.981 - - 0.981 - - - - - -
95. abcf1 ENSDARG00000031795 8635 0.981 - - 0.981 - - - - - - ATP-binding cassette, sub-family F (GCN20), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-31]
96. rpl4 ENSDARG00000041182 18655 0.98 - - 0.980 - - - - - - ribosomal protein L4 [Source:ZFIN;Acc:ZDB-GENE-030131-9034]
97. tbpl2 ENSDARG00000097302 70 0.98 - 0.980 - - - - - - - TATA box binding protein like 2 [Source:ZFIN;Acc:ZDB-GENE-040520-3]
98. btg2 ENSDARG00000020298 6616 0.98 - - 0.980 - - - - - - B-cell translocation gene 2 [Source:ZFIN;Acc:ZDB-GENE-000210-15]
99. slc9a8 ENSDARG00000020699 206 0.98 - 0.980 - - - - - - - solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8 [Source:ZFIN;Acc:ZDB-GENE-041212-7]
100. kpnb3 ENSDARG00000040245 7967 0.979 - - 0.979 - - - - - - karyopherin (importin) beta 3 [Source:ZFIN;Acc:ZDB-GENE-030424-2]

There are 850 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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