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Results for lmx1ba

Gene Name Gene ID Reads Annotation
lmx1ba ENSDARG00000104815 376 LIM homeobox transcription factor 1, beta a [Source:ZFIN;Acc:ZDB-GENE-050114-3]










Genes with expression patterns similar to lmx1ba

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lmx1ba ENSDARG00000104815 376 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 LIM homeobox transcription factor 1, beta a [Source:ZFIN;Acc:ZDB-GENE-050114-3]
2. ksr2 ENSDARG00000094526 134 2.523 - - - - - 0.892 0.752 0.879 - kinase suppressor of ras 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8047]
3. cdk12 ENSDARG00000063726 1220 2.332 - 0.708 - - - 0.822 - 0.802 - cyclin-dependent kinase 12 [Source:ZFIN;Acc:ZDB-GENE-081104-294]
4. rab25a ENSDARG00000058800 451 2.271 - - 0.729 0.701 - 0.841 - - - RAB25, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-041212-69]
5. itm2cb ENSDARG00000039650 716 2.186 - 0.723 - - - 0.739 - 0.724 - integral membrane protein 2Cb [Source:ZFIN;Acc:ZDB-GENE-030131-7806]
6. GPR156 ENSDARG00000086215 126 1.814 - - - - - 0.972 - 0.842 - G protein-coupled receptor 156 [Source:ZFIN;Acc:ZDB-GENE-060201-2]
7. HELZ2_1 ENSDARG00000012600 53 1.778 - - - 0.832 - 0.946 - - - helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
8. si:ch211-215p11.4 si:ch211-215p11.4 67 1.761 - - - - - 0.919 - 0.842 -
9. tenm1 ENSDARG00000003403 148 1.749 - - - - - 0.876 - 0.873 - teneurin transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060531-26]
10. rad21b ENSDARG00000035655 87 1.735 - - - - - 0.849 - 0.886 - RAD21 cohesin complex component b [Source:ZFIN;Acc:ZDB-GENE-060503-223]
11. ablim1a ENSDARG00000060149 228 1.727 - - - - - 0.890 - 0.837 - actin binding LIM protein 1a [Source:ZFIN;Acc:ZDB-GENE-080219-41]
12. LINGO2 LINGO2 300 1.722 - - - - - 0.868 - 0.854 -
13. si:ch211-133l11.10 ENSDARG00000005626 381 1.718 - - - 0.837 - 0.881 - - - si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
14. zgc:113294 ENSDARG00000032285 132 1.713 - - - - - 0.930 0.783 - - zgc:113294 [Source:ZFIN;Acc:ZDB-GENE-050320-124]
15. si:dkey-270b7.1 si:dkey-270b7.1 83 1.704 - - - - - 0.843 - 0.861 -
16. map2k2b ENSDARG00000068918 676 1.7 - 0.857 - - - 0.843 - - - mitogen-activated protein kinase kinase 2b [Source:ZFIN;Acc:ZDB-GENE-080219-34]
17. chrnb3a ENSDARG00000052764, ENSDARG00000112769 139 1.696 - - - 0.829 - 0.867 - - - cholinergic receptor, nicotinic, beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040108-1]
18. nin ENSDARG00000060298 1558 1.694 - - - - - 0.882 - 0.812 - ninein (GSK3B interacting protein) [Source:ZFIN;Acc:ZDB-GENE-070725-1]
19. itfg2 ENSDARG00000002174 114 1.685 - - - - - 0.882 0.803 - - integrin alpha FG-GAP repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-041008-161]
20. slc1a1 ENSDARG00000020212 104 1.678 - - - - - 0.816 - 0.862 - solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 [Source:ZFIN;Acc:ZDB-GENE-040718-414]
21. atxn1b ENSDARG00000060862 345 1.673 - - - - - 0.853 - 0.820 - ataxin 1b [Source:ZFIN;Acc:ZDB-GENE-061218-2]
22. PROCA1 ENSDARG00000069823 343 1.663 - 0.782 - - - 0.881 - - - protein interacting with cyclin A1 [Source:ZFIN;Acc:ZDB-GENE-110418-1]
23. si:dkey-220o21.5 si:dkey-220o21.5 24 1.658 - - - - - - 0.799 0.859 -
24. memo1 ENSDARG00000010823 1681 1.655 - - - 0.841 - 0.814 - - - mediator of cell motility 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5571]
25. C8H1orf194 C8H1orf194 111 1.654 - - - - - 0.891 0.763 - -
26. foxi2 ENSDARG00000069715, ENSDARG00000116791 81 1.649 - - - - - - 0.770 0.879 - forkhead box I2 [Source:ZFIN;Acc:ZDB-GENE-031126-2]
27. sox2 ENSDARG00000070913 2763 1.64 - - - - - 0.911 0.729 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
28. kif19 ENSDARG00000053026 124 1.636 - - - - - 0.935 0.701 - - kinesin family member 19 [Source:ZFIN;Acc:ZDB-GENE-080215-2]
29. ADCYAP1R1 ADCYAP1R1 118 1.629 - - - - - 0.911 0.718 - -
30. elk1 ENSDARG00000078066 414 1.628 - - - - - 0.917 - 0.711 - ELK1, member of ETS oncogene family [Source:ZFIN;Acc:ZDB-GENE-090529-5]
31. asphd2 ENSDARG00000059629 1005 1.625 - 0.737 - - - 0.888 - - - aspartate beta-hydroxylase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-061103-142]
32. zgc:113363 ENSDARG00000101206 474 1.617 0.794 - - - - - - 0.823 - zgc:113363 [Source:ZFIN;Acc:ZDB-GENE-050327-7]
33. tnrc5 412 1.616 - - - - - 0.835 - 0.781 - trinucleotide repeat containing 5
34. POMK ENSDARG00000003208, ENSDARG00000112152 529 1.615 - - - 0.763 - - - 0.852 - protein-O-mannose kinase [Source:ZFIN;Acc:ZDB-GENE-041114-119]
35. CT990561.1 ENSDARG00000058284 566 1.615 - - - - - 0.816 0.799 - - EPH receptor A5 [Source:NCBI gene;Acc:797595]
36. hmg20b ENSDARG00000042045, ENSDARG00000116536 2638 1.614 - - - 0.873 - 0.741 - - - high mobility group 20B [Source:ZFIN;Acc:ZDB-GENE-030131-4258]
37. xpnpep3 ENSDARG00000007916 166 1.612 - - - - - 0.796 - 0.816 - X-prolyl aminopeptidase 3, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040426-2076]
38. PMFBP1 ENSDARG00000101917 292 1.611 - - - - - 0.828 - 0.783 - polyamine modulated factor 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-131127-619]
39. ift57 ENSDARG00000021022 288 1.609 - - - 0.830 - 0.779 - - - intraflagellar transport 57 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-1]
40. alkbh6 ENSDARG00000077253 117 1.606 - 0.741 - - - - - 0.865 - alkB homolog 6 [Source:ZFIN;Acc:ZDB-GENE-060407-1]
41. pknox2 ENSDARG00000055349 784 1.601 - - - - - 0.895 0.706 - - pbx/knotted 1 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-031118-112]
42. kcnip1b ENSDARG00000034808, ENSDARG00000111766 136 1.598 - - - - - 0.888 0.710 - - Kv channel interacting protein 1 b [Source:ZFIN;Acc:ZDB-GENE-041212-57]
43. CR388231.1 ENSDARG00000098710 153 1.597 - - - - - 0.842 0.755 - -
44. crabp2a_1 ENSDARG00000073978 888 1.594 - 0.744 - - - 0.850 - - - cellular retinoic acid binding protein 2, a [Source:ZFIN;Acc:ZDB-GENE-020320-4]
45. zbtb2b ENSDARG00000028086, ENSDARG00000110834 1609 1.593 - 0.747 - - - 0.846 - - - zinc finger and BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2753]
46. tcf20 ENSDARG00000078348 1051 1.593 - 0.792 - 0.801 - - - - - transcription factor 20 [Source:ZFIN;Acc:ZDB-GENE-110411-97]
47. nfybb ENSDARG00000045611, ENSDARG00000110926 350 1.593 - - - 0.822 - 0.771 - - - nuclear transcription factor Y, beta b [Source:ZFIN;Acc:ZDB-GENE-050306-25]
48. ubp1 ENSDARG00000018000 1047 1.592 - - - - - 0.883 - 0.709 - upstream binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-870]
49. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 1.59 - 0.749 - - - 0.841 - - - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
50. sema6a ENSDARG00000102165 1401 1.589 - 0.776 - - - - - 0.813 - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A [Source:ZFIN;Acc:ZDB-GENE-030131-8004]
51. ppm1ba ENSDARG00000001888 319 1.584 - - - 0.795 - - - 0.789 - protein phosphatase, Mg2+/Mn2+ dependent, 1Ba [Source:ZFIN;Acc:ZDB-GENE-991102-16]
52. dab2ipb ENSDARG00000075110, ENSDARG00000117186 414 1.584 - - - - - 0.722 - 0.862 - DAB2 interacting protein b [Source:ZFIN;Acc:ZDB-GENE-030131-2449]
53. CT030046.1 CT030046.1 190 1.583 - - - - - 0.807 0.776 - -
54. stard3 ENSDARG00000017809 727 1.58 - - - 0.700 - - - 0.880 - StAR-related lipid transfer (START) domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-001120-2]
55. cacna2d3 ENSDARG00000078760 211 1.577 - - - - - 0.796 0.781 - - calcium channel, voltage dependent, alpha2/delta subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030616-133]
56. kcnn1a ENSDARG00000091306 95 1.576 - - - - - 0.859 0.717 - - potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1a [Source:ZFIN;Acc:ZDB-GENE-070912-703]
57. SENP2 ENSDARG00000073837 1411 1.574 - 0.783 - - - 0.791 - - - SUMO specific peptidase 2 [Source:ZFIN;Acc:ZDB-GENE-060810-183]
58. fam203a fam203a 570 1.574 - 0.748 - 0.826 - - - - -
59. aatka ENSDARG00000078222 218 1.573 - 0.745 - 0.828 - - - - - apoptosis-associated tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-100812-4]
60. tnika ENSDARG00000056218 728 1.57 - - - - - 0.860 0.710 - - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
61. NECAB3 ENSDARG00000074794 379 1.567 - - - 0.763 - 0.804 - - - N-terminal EF-hand calcium binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-131121-74]
62. slc6a1b ENSDARG00000039647 1301 1.564 - - - - - 0.861 0.703 - - solute carrier family 6 (neurotransmitter transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-041114-57]
63. sertad2a ENSDARG00000093412 503 1.564 - - 0.771 - - - 0.793 - - SERTA domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050309-236]
64. erbb2ip 403 1.563 - - - 0.828 - - - 0.735 - erbb2 interacting protein, transcript variant X3
65. nsl1 ENSDARG00000024471 1269 1.56 - 0.721 - - - - - 0.839 - NSL1, MIS12 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-041014-362]
66. KCNA1 KCNA1 268 1.56 0.778 - - - - - 0.782 - -
67. EML6 250 1.557 - - - - - 0.772 0.785 - - echinoderm microtubule associated protein like 6
68. SACS_1 SACS_1 234 1.555 - - - - - 0.801 0.754 - -
69. mkrn2 ENSDARG00000007630 127 1.554 - - - - - 0.844 0.710 - - makorin, ring finger protein, 2 [Source:ZFIN;Acc:ZDB-GENE-020213-2]
70. usb1 ENSDARG00000003841 524 1.551 - - - - - 0.821 - 0.730 - U6 snRNA biogenesis 1 [Source:ZFIN;Acc:ZDB-GENE-040801-197]
71. gpr144 gpr144 479 1.55 - - - - - 0.840 0.710 - -
72. mark4a ENSDARG00000023914, ENSDARG00000112220 445 1.548 - 0.712 - - - - - 0.836 - MAP/microtubule affinity-regulating kinase 4a [Source:ZFIN;Acc:ZDB-GENE-060531-156]
73. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 1.545 - - - - - 0.832 0.713 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
74. lrrc47 ENSDARG00000053138 417 1.541 - - - 0.724 - 0.817 - - - leucine rich repeat containing 47 [Source:ZFIN;Acc:ZDB-GENE-060503-289]
75. bmp6 ENSDARG00000015686 211 1.538 - - 0.703 - - - - 0.835 - bone morphogenetic protein 6 [Source:ZFIN;Acc:ZDB-GENE-050306-42]
76. chmp7 ENSDARG00000041362 831 1.537 - 0.779 - - - 0.758 - - - charged multivesicular body protein 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1750]
77. KLHL33 ENSDARG00000105343 219 1.536 - - 0.700 - - - 0.836 - - kelch-like family member 33 [Source:ZFIN;Acc:ZDB-GENE-131016-4]
78. egr2b ENSDARG00000042826 94 1.535 - - 0.769 - - - 0.766 - - early growth response 2b [Source:ZFIN;Acc:ZDB-GENE-980526-283]
79. PLEKHM3 ENSDARG00000030633 496 1.535 - - - - - 0.780 0.755 - - pleckstrin homology domain containing, family M, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-382]
80. dnajc6 ENSDARG00000079891 438 1.534 - - - - - 0.813 0.721 - - DnaJ (Hsp40) homolog, subfamily C, member 6 [Source:ZFIN;Acc:ZDB-GENE-080104-2]
81. wdr82 ENSDARG00000014083 3159 1.528 - 0.796 - - - 0.732 - - - WD repeat domain 82 [Source:ZFIN;Acc:ZDB-GENE-030131-333]
82. TTBK1_1 TTBK1_1 132 1.527 - - - - - 0.813 0.714 - -
83. st18 663 1.521 - - - - - 0.731 0.790 - - suppression of tumorigenicity 18, zinc finger
84. pdgfab ENSDARG00000098578, ENSDARG00000109732 718 1.521 - 0.782 - - - 0.739 - - - platelet-derived growth factor alpha polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060929-124]
85. arhgef7a ENSDARG00000006299, ENSDARG00000114088 1627 1.516 - 0.791 - - - 0.725 - - - Rho guanine nucleotide exchange factor (GEF) 7a [Source:ZFIN;Acc:ZDB-GENE-060322-11]
86. nrg1 ENSDARG00000104314 1081 1.507 - - - 0.796 - - - 0.711 - neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
87. opa1_1 ENSDARG00000070801 1424 1.507 - - - - - 0.734 0.773 - - optic atrophy 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-041114-7]
88. CABZ01072954.1 CABZ01072954.1 2330 1.506 - - - - - 0.791 0.715 - -
89. C12H10orf71 C12H10orf71 595 1.502 - - - 0.786 - - 0.716 - -
90. pax3a ENSDARG00000010192 626 1.499 - - - - - 0.706 - 0.793 - paired box 3a [Source:ZFIN;Acc:ZDB-GENE-980526-52]
91. si:dkeyp-53d3.6 204 1.497 - - 0.718 - - 0.779 - - - si:dkeyp-53d3.6, transcript variant X1
92. MCOLN3_1 MCOLN3_1 192 1.496 - - 0.720 - - - - 0.776 -
93. CU855694.1 ENSDARG00000098513 402 1.489 - - - 0.788 - 0.701 - - -
94. BX927294.1 BX927294.1 361 1.485 - - - - - 0.779 - 0.706 -
95. ppp2r5d ENSDARG00000014428 771 1.483 - - - 0.762 - 0.721 - - - protein phosphatase 2, regulatory subunit B', delta [Source:ZFIN;Acc:ZDB-GENE-040426-2568]
96. lama4 ENSDARG00000020785 1522 1.48 0.701 0.779 - - - - - - - laminin, alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040724-213]
97. setd1a ENSDARG00000060030 874 1.473 - 0.761 - - - 0.712 - - - SET domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-080521-4]
98. sox21a ENSDARG00000031664, ENSDARG00000111842 1700 1.472 - 0.739 - - - - 0.733 - - SRY (sex determining region Y)-box 21a [Source:ZFIN;Acc:ZDB-GENE-990715-6]
99. snai1b ENSDARG00000046019 886 1.469 - 0.702 - - - 0.767 - - - snail family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-980526-514]
100. MANEAL ENSDARG00000056450 262 1.462 - - - - - 0.754 0.708 - - mannosidase endo-alpha like [Source:HGNC Symbol;Acc:HGNC:26452]

There are 1941 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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