Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lmod2a

Gene Name Gene ID Reads Annotation
lmod2a ENSDARG00000045634, ENSDARG00000112060, ENSDARG00000113325 2 leiomodin 2 (cardiac) a [Source:ZFIN;Acc:ZDB-GENE-040912-41]










Genes with expression patterns similar to lmod2a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lmod2a ENSDARG00000045634, ENSDARG00000112060, ENSDARG00000113325 2 4 - - 1.000 - - 1.000 - 1.000 1.000 leiomodin 2 (cardiac) a [Source:ZFIN;Acc:ZDB-GENE-040912-41]
2. si:ch211-128b10.4 si:ch211-128b10.4 3 2 - - - - - 1.000 - - 1.000
3. BRINP3 BRINP3 11 2 - - - - - 1.000 - 1.000 -
4. CABZ01081747.1 ENSDARG00000098362 1 1.916 - - - - - - - 1.000 0.916 gastrula zinc finger protein XlCGF57.1-like [Source:NCBI gene;Acc:100330321]
5. chrm2a ENSDARG00000098612 5 1.826 - - 0.826 - - 1.000 - - - cholinergic receptor, muscarinic 2a [Source:ZFIN;Acc:ZDB-GENE-030314-1]
6. BX936386.1 ENSDARG00000097166 5 1.826 - - 0.826 - - - - 1.000 -
7. PLCB1 2 1.826 - - 0.826 - - 1.000 - - - phospholipase C beta 1
8. CYP27A1 CYP27A1 4 1.826 - - 0.826 - - 1.000 - - -
9. BX546499.2 ENSDARG00000093947 26 1.822 - - - - - 0.954 - - 0.868
10. SEMA6B SEMA6B 35 1.739 - - - - - 0.739 - 1.000 -
11. DGKA DGKA 8 1.725 - - - - - - - 0.725 1.000
12. fgf11b ENSDARG00000043907 16 1.721 - - - - - 1.000 - 0.721 - fibroblast growth factor 11b [Source:ZFIN;Acc:ZDB-GENE-100316-2]
13. HIPK1 HIPK1 8 1.654 - - 0.826 - - - - - 0.828
14. nkx2.7 ENSDARG00000021232 38 1.465 - - - - - - - 0.733 0.732 NK2 transcription factor related 7 [Source:ZFIN;Acc:ZDB-GENE-990415-179]
15. avpr2aa ENSDARG00000007436 43 1.459 - - - - - 0.724 - - 0.735 arginine vasopressin receptor 2a, duplicate a [Source:ZFIN;Acc:ZDB-GENE-090313-344]
16. si:ch211-188i4.4 5 1 - - - - - - - 1.000 - si:ch211-188i4.4, transcript variant X3
17. ACSL6 12 1 - - - - - 1.000 - - - acyl-CoA synthetase long-chain family member 6
18. si:ch211-180p9.2 si:ch211-180p9.2 1 1 - - - - - - - - 1.000
19. ppp4r4 ENSDARG00000010407 1 1 - - - - - 1.000 - - - protein phosphatase 4, regulatory subunit 4 [Source:ZFIN;Acc:ZDB-GENE-041001-164]
20. si:dkey-14i17.2 si:dkey-14i17.2 10 1 - - - - - - - - 1.000
21. CR848788.1 ENSDARG00000103037 1 1 - - - - - - - - 1.000
22. cecr1b 2 1 - - - - - 1.000 - - - cat eye syndrome chromosome region, candidate 1b
23. lipt2 ENSDARG00000069852 14 1 - - - - - - - 1.000 - lipoyl(octanoyl) transferase 2 [Source:ZFIN;Acc:ZDB-GENE-060312-18]
24. cyp2n13 ENSDARG00000042953 10 1 - - - - - 1.000 - - - cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
25. radil ENSDARG00000079779 14 1 - - - - - - - - 1.000 Ras association and DIL domains [Source:ZFIN;Acc:ZDB-GENE-071206-1]
26. GTF3A GTF3A 6 1 - - - - - - - - 1.000
27. wnt10b ENSDARG00000040925 162 1 - - - - - 1.000 - - - wingless-type MMTV integration site family, member 10b [Source:ZFIN;Acc:ZDB-GENE-980526-524]
28. hsd17b7_1 ENSDARG00000088140 36 1 - - - - - 1.000 - - - hydroxysteroid (17-beta) dehydrogenase 7 [Source:ZFIN;Acc:ZDB-GENE-061013-378]
29. CR381630.1 CR381630.1 23 1 - - - - - 1.000 - - -
30. skor1a ENSDARG00000069030 19 1 - - - - - 1.000 - - - SKI family transcriptional corepressor 1a [Source:ZFIN;Acc:ZDB-GENE-080722-5]
31. 5S_rRNA_10 5S_rRNA_10 2 1 - - - - - - - - 1.000
32. desmb ENSDARG00000005221, ENSDARG00000110245 3 1 - - - - - - - - 1.000 desmin b [Source:ZFIN;Acc:ZDB-GENE-061027-102]
33. coch ENSDARG00000024032 7 1 - - - - - - - 1.000 - coagulation factor C homolog, cochlin (Limulus polyphemus) [Source:ZFIN;Acc:ZDB-GENE-030616-403]
34. BX005052.1 BX005052.1 16 1 - - - - - 1.000 - - -
35. si:ch73-77n15.2 si:ch73-77n15.2 0 1 - - - - - - - 1.000 -
36. IKZF4 ENSDARG00000037068 36 1 - - - - - 1.000 - - - IKAROS family zinc finger 4 [Source:ZFIN;Acc:ZDB-GENE-180319-1]
37. atf1 ENSDARG00000044301, ENSDARG00000109865 2 1 - - - - - - - - 1.000 activating transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4334]
38. si:ch211-168h21.3 10 1 - - - - - 1.000 - - - si:ch211-168h21.3
39. ZNF337_16 ZNF337_16 22 1 - - - - - 1.000 - - -
40. BX470083.4 ENSDARG00000115059 8 1 - - - - - - - 1.000 -
41. C3H17orf104 C3H17orf104 16 1 - - - - - - - 1.000 -
42. ST3GAL1 ENSDARG00000079654 2 1 - - - - - - - - 1.000 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060321-1]
43. zgc:194210 ENSDARG00000073799, ENSDARG00000115078 100 1 - - - - - 1.000 - - - zgc:194210 [Source:ZFIN;Acc:ZDB-GENE-030131-2476]
44. pygo1 ENSDARG00000098687 4 1 - - - - - 1.000 - - - pygopus family PHD finger 1 [Source:ZFIN;Acc:ZDB-GENE-080204-62]
45. nprl2 ENSDARG00000059613, ENSDARG00000112631 160 1 - - - - - 1.000 - - - NPR2 like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-060825-93]
46. GAS2 18 1 - - - - - 1.000 - - - growth arrest specific 2, transcript variant X1
47. CR792453.1 ENSDARG00000095699 4 1 - - - - - - - 1.000 -
48. si:ch211-245l1.1 si:ch211-245l1.1 1 1 - - - - - 1.000 - - -
49. rhbdd3 ENSDARG00000079816 2 1 - - - - - 1.000 - - - rhomboid domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-39]
50. zgc:165453 ENSDARG00000078183 3 1 - - - - - 1.000 - - - zgc:165453 [Source:ZFIN;Acc:ZDB-GENE-070720-13]
51. si:dkey-222e15.4 10 1 - - - - - - - 1.000 - si:dkey-222e15.4, transcript variant X4
52. shank3a ENSDARG00000063332 5 1 - - - - - 1.000 - - - SH3 and multiple ankyrin repeat domains 3a [Source:ZFIN;Acc:ZDB-GENE-060503-369]
53. si:ch211-214c7.4 ENSDARG00000069595 56 1 - - - - - 1.000 - - - si:ch211-214c7.4 [Source:ZFIN;Acc:ZDB-GENE-030131-6275]
54. syt15 ENSDARG00000079926 8 1 - - - - - - - 1.000 - synaptotagmin XV [Source:ZFIN;Acc:ZDB-GENE-090527-2]
55. GALNT8_1 GALNT8_1 10 1 - - - - - - - 1.000 -
56. FAM13C FAM13C 1 1 - - - - - - - - 1.000
57. CMA1_6 CMA1_6 2 1 - - - - - - - 1.000 -
58. si:ch211-199i18.8 si:ch211-199i18.8 4 1 - - - - - - - - 1.000
59. trim9 ENSDARG00000039123 53 1 - - - - - 1.000 - - - tripartite motif containing 9 [Source:ZFIN;Acc:ZDB-GENE-030131-8043]
60. MPP7 MPP7 9 1 - - - - - - - 1.000 -
61. scn1ba ENSDARG00000060222, ENSDARG00000115181 76 1 - - - - - 1.000 - - - sodium channel, voltage-gated, type I, beta a [Source:ZFIN;Acc:ZDB-GENE-060503-604]
62. CR854907.1 ENSDARG00000097386 1 1 - - - - - - - - 1.000
63. si:dkey-272j9.2 si:dkey-272j9.2 91 1 - - - - - 1.000 - - -
64. si:ch211-59g22.2 si:ch211-59g22.2 7 1 - - - - - 1.000 - - -
65. SYT17 ENSDARG00000060741 1 1 - - - - - 1.000 - - - synaptotagmin XVII [Source:ZFIN;Acc:ZDB-GENE-090527-1]
66. BX897747.3 BX897747.3 0 1 - - - - - - - 1.000 -
67. cmpk2 ENSDARG00000031359 1 1 - - - - - - - 1.000 - cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040724-24]
68. FP102191.1 FP102191.1 21 1 - - - - - - - 1.000 -
69. CR678040.1 CR678040.1 117 1 - - - - - 1.000 - - -
70. zgc:165582 ENSDARG00000074362 198 1 - - - - - 1.000 - - - zgc:165582 [Source:ZFIN;Acc:ZDB-GENE-070820-9]
71. npy4r ENSDARG00000043341, ENSDARG00000113787 1 1 - - - - - 1.000 - - - neuropeptide Y receptor Y4 [Source:ZFIN;Acc:ZDB-GENE-980526-393]
72. lrch4 ENSDARG00000068258 24 1 - - - - - - - 1.000 - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
73. PRKCA_1 ENSDARG00000099841 12 1 - - - - - 1.000 - - - protein kinase C alpha [Source:HGNC Symbol;Acc:HGNC:9393]
74. fam207a_1 ENSDARG00000071500 1 1 - - - - - - - 1.000 - family with sequence similarity 207, member A [Source:ZFIN;Acc:ZDB-GENE-060825-113]
75. porcnl ENSDARG00000052455 29 1 - - - - - 1.000 - - - porcupine O-acyltransferase like [Source:ZFIN;Acc:ZDB-GENE-030131-5931]
76. CABZ01057951.1 CABZ01057951.1 10 1 - - - - - - - - 1.000
77. zgc:77112 ENSDARG00000015657 24 1 - - - - - 1.000 - - - zgc:77112 [Source:ZFIN;Acc:ZDB-GENE-040426-2219]
78. grem1a ENSDARG00000029546, ENSDARG00000090720 1 1 - - - - - - - 1.000 - gremlin 1a, DAN family BMP antagonist [Source:ZFIN;Acc:ZDB-GENE-040625-1]
79. tgm1l2 ENSDARG00000101595 0 1 - - - - - - - 1.000 - transglutaminase 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-110408-37]
80. brat1 ENSDARG00000062585 1 1 - - - - - - - 1.000 - BRCA1-associated ATM activator 1 [Source:ZFIN;Acc:ZDB-GENE-060421-6989]
81. LAMA3 ENSDARG00000071462 5 1 - - - - - 1.000 - - - laminin, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050208-475]
82. cd74b ENSDARG00000036628 8 1 - - - - - - - - 1.000 CD74 molecule, major histocompatibility complex, class II invariant chain b [Source:ZFIN;Acc:ZDB-GENE-990910-10]
83. U1_22 U1_22 0 1 - - - - - - - 1.000 -
84. si:dkey-211i20.3 si:dkey-211i20.3 1 1 - - - - - - - 1.000 -
85. trim35-23 ENSDARG00000102368, ENSDARG00000113611 1 1 - - - - - - - - 1.000 tripartite motif containing 35-23 [Source:ZFIN;Acc:ZDB-GENE-060503-295]
86. si:dkey-199l1.1 si:dkey-199l1.1 7 1 - - - - - - - 1.000 -
87. NPY2R ENSDARG00000094763, ENSDARG00000112792 1 1 - - - - - 1.000 - - - neuropeptide Y receptor Y2 [Source:ZFIN;Acc:ZDB-GENE-040924-8]
88. si:dkey-33k1.2 si:dkey-33k1.2 1 1 - - - - - - - - 1.000
89. si:dkey-284p5.3 ENSDARG00000095638 4 1 - - - - - 1.000 - - - si:dkey-284p5.3 [Source:ZFIN;Acc:ZDB-GENE-060503-352]
90. zgc:194418 ENSDARG00000111790 1 1 - - - - - - - - 1.000 zgc:194418 [Source:ZFIN;Acc:ZDB-GENE-080723-5]
91. NXPH4 11 1 - - - - - - - 1.000 - neurexophilin 4
92. zgc:92249 14 1 - - - - - 1.000 - - - zgc:92249
93. si:dkey-3p4.4 si:dkey-3p4.4 2 1 - - - - - - - - 1.000
94. nmu ENSDARG00000043299 67 1 - - - - - 1.000 - - - neuromedin U [Source:ZFIN;Acc:ZDB-GENE-041001-111]
95. POLR2E POLR2E 1 1 - - - - - - - - 1.000
96. psmb11 psmb11 5 1 - - - - - 1.000 - - -
97. slc41a1 ENSDARG00000070214, ENSDARG00000114707 20 1 - - - - - 1.000 - - - solute carrier family 41 (magnesium transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4700]
98. CR936967.1 CR936967.1 2 1 - - - - - - - 1.000 -
99. EVA1A ENSDARG00000061405 1 1 - - - - - - - - 1.000 eva-1 homolog A (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-060929-200]
100. 5S_rRNA_15 5S_rRNA_15 9 1 - - - - - 1.000 - - -

There are 604 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA