Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lmod2a

Gene Name Gene ID Reads Annotation
lmod2a ENSDARG00000045634, ENSDARG00000112060, ENSDARG00000113325 2 leiomodin 2 (cardiac) a [Source:ZFIN;Acc:ZDB-GENE-040912-41]










Genes with expression patterns similar to lmod2a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lmod2a ENSDARG00000045634, ENSDARG00000112060, ENSDARG00000113325 2 4 - - 1.000 - - 1.000 - 1.000 1.000 leiomodin 2 (cardiac) a [Source:ZFIN;Acc:ZDB-GENE-040912-41]
2. BRINP3 BRINP3 11 2 - - - - - 1.000 - 1.000 -
3. si:ch211-128b10.4 si:ch211-128b10.4 3 2 - - - - - 1.000 - - 1.000
4. CABZ01081747.1 ENSDARG00000098362 1 1.916 - - - - - - - 1.000 0.916 gastrula zinc finger protein XlCGF57.1-like [Source:NCBI gene;Acc:100330321]
5. PLCB1 2 1.826 - - 0.826 - - 1.000 - - - phospholipase C beta 1
6. CYP27A1 CYP27A1 4 1.826 - - 0.826 - - 1.000 - - -
7. BX936386.1 ENSDARG00000097166 5 1.826 - - 0.826 - - - - 1.000 -
8. chrm2a ENSDARG00000098612 5 1.826 - - 0.826 - - 1.000 - - - cholinergic receptor, muscarinic 2a [Source:ZFIN;Acc:ZDB-GENE-030314-1]
9. BX546499.2 ENSDARG00000093947 26 1.822 - - - - - 0.954 - - 0.868
10. SEMA6B SEMA6B 35 1.739 - - - - - 0.739 - 1.000 -
11. DGKA DGKA 8 1.725 - - - - - - - 0.725 1.000
12. fgf11b ENSDARG00000043907 16 1.721 - - - - - 1.000 - 0.721 - fibroblast growth factor 11b [Source:ZFIN;Acc:ZDB-GENE-100316-2]
13. HIPK1 HIPK1 8 1.654 - - 0.826 - - - - - 0.828
14. nkx2.7 ENSDARG00000021232 38 1.465 - - - - - - - 0.733 0.732 NK2 transcription factor related 7 [Source:ZFIN;Acc:ZDB-GENE-990415-179]
15. avpr2aa ENSDARG00000007436 43 1.459 - - - - - 0.724 - - 0.735 arginine vasopressin receptor 2a, duplicate a [Source:ZFIN;Acc:ZDB-GENE-090313-344]
16. si:dkeyp-25a3.1 si:dkeyp-25a3.1 4 1 - - - - - - - - 1.000
17. prepl ENSDARG00000017853, ENSDARG00000114415 4 1 - - - - - 1.000 - - - prolyl endopeptidase like [Source:ZFIN;Acc:ZDB-GENE-090313-224]
18. si:dkey-11e23.3 si:dkey-11e23.3 3 1 - - - - - 1.000 - - -
19. si:ch73-95a24.1 si:ch73-95a24.1 11 1 - - - - - - - - 1.000
20. brat1 ENSDARG00000062585 1 1 - - - - - - - 1.000 - BRCA1-associated ATM activator 1 [Source:ZFIN;Acc:ZDB-GENE-060421-6989]
21. si:dkey-33i11.1 ENSDARG00000053027 2 1 - - - - - - - 1.000 - si:dkey-33i11.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4630]
22. CR847844.3 CR847844.3 1 1 - - - - - - - 1.000 -
23. zgc:165582 ENSDARG00000074362 198 1 - - - - - 1.000 - - - zgc:165582 [Source:ZFIN;Acc:ZDB-GENE-070820-9]
24. glsa ENSDARG00000062812 1 1 - - - - - - - - 1.000 glutaminase a [Source:ZFIN;Acc:ZDB-GENE-050204-3]
25. slc41a1 ENSDARG00000070214, ENSDARG00000114707 20 1 - - - - - 1.000 - - - solute carrier family 41 (magnesium transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4700]
26. 5S_rRNA_10 5S_rRNA_10 2 1 - - - - - - - - 1.000
27. tcf4 0 1 - - - - - - - 1.000 - transcription factor 4
28. CR848788.1 ENSDARG00000103037 1 1 - - - - - - - - 1.000
29. or115-8 ENSDARG00000092406 1 1 - - - - - - - 1.000 - odorant receptor, family F, subfamily 115, member 8 [Source:ZFIN;Acc:ZDB-GENE-070806-10]
30. hmgb2a ENSDARG00000029722 28 1 - - - - - 1.000 - - - high mobility group box 2a [Source:ZFIN;Acc:ZDB-GENE-051120-126]
31. CR352328.3 CR352328.3 9 1 - - - - - - - 1.000 -
32. OSBPL1A ENSDARG00000105147 16 1 - - - - - 1.000 - - - oxysterol binding protein-like 1A [Source:ZFIN;Acc:ZDB-GENE-050208-657]
33. SYT17 ENSDARG00000060741 1 1 - - - - - 1.000 - - - synaptotagmin XVII [Source:ZFIN;Acc:ZDB-GENE-090527-1]
34. si:zfos-1762d12.1 si:zfos-1762d12.1 5 1 - - - - - - - 1.000 -
35. si:dkey-252l8.1 si:dkey-252l8.1 2 1 - - - - - - - 1.000 -
36. si:dkey-273g3.2 si:dkey-273g3.2 2 1 - - - - - - - 1.000 -
37. slc5a9 ENSDARG00000005518 16 1 - - - - - - - - 1.000 solute carrier family 5 (sodium/sugar cotransporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-080513-3]
38. ncanb ENSDARG00000005783 22 1 - - - - - 1.000 - - - neurocan b [Source:ZFIN;Acc:ZDB-GENE-050208-586]
39. si:ch211-163f10.4 si:ch211-163f10.4 1 1 - - - - - - - - 1.000
40. tgm1l2 ENSDARG00000101595 0 1 - - - - - - - 1.000 - transglutaminase 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-110408-37]
41. CU207301.11 CU207301.11 1 1 - - - - - - - 1.000 -
42. si:dkey-272j9.2 si:dkey-272j9.2 91 1 - - - - - 1.000 - - -
43. GPR114 GPR114 1 1 - - - - - 1.000 - - -
44. FAM120B ENSDARG00000030804 1 1 - - - - - 1.000 - - - family with sequence similarity 120B [Source:ZFIN;Acc:ZDB-GENE-040801-119]
45. zgc:92249 14 1 - - - - - 1.000 - - - zgc:92249
46. tekt3 ENSDARG00000045038 9 1 - - - - - - - 1.000 - tektin 3 [Source:ZFIN;Acc:ZDB-GENE-080130-2]
47. VAV1 VAV1 0 1 - - - - - - - 1.000 -
48. sts ENSDARG00000053241 10 1 - - - - - - - 1.000 - steroid sulfatase (microsomal), isozyme S [Source:ZFIN;Acc:ZDB-GENE-030717-5]
49. POLR2E POLR2E 1 1 - - - - - - - - 1.000
50. syt9b ENSDARG00000029239 31 1 - - - - - 1.000 - - - synaptotagmin IXb [Source:ZFIN;Acc:ZDB-GENE-040822-6]
51. BX323557.2 BX323557.2 1 1 - - - - - - - - 1.000
52. desmb ENSDARG00000005221, ENSDARG00000110245 3 1 - - - - - - - - 1.000 desmin b [Source:ZFIN;Acc:ZDB-GENE-061027-102]
53. si:dkey-211i20.3 si:dkey-211i20.3 1 1 - - - - - - - 1.000 -
54. rxfp2l ENSDARG00000068731 0 1 - - - - - - - 1.000 - relaxin family peptide receptor 2, like [Source:ZFIN;Acc:ZDB-GENE-060531-8]
55. zgc:165453 ENSDARG00000078183 3 1 - - - - - 1.000 - - - zgc:165453 [Source:ZFIN;Acc:ZDB-GENE-070720-13]
56. si:ch211-67f13.7 ENSDARG00000077845 8 1 - - - - - - - 1.000 - si:ch211-67f13.7 [Source:ZFIN;Acc:ZDB-GENE-090313-126]
57. nsfa ENSDARG00000007654 16 1 - - - - - 1.000 - - - N-ethylmaleimide-sensitive factor a [Source:ZFIN;Acc:ZDB-GENE-030616-37]
58. cd74b ENSDARG00000036628 8 1 - - - - - - - - 1.000 CD74 molecule, major histocompatibility complex, class II invariant chain b [Source:ZFIN;Acc:ZDB-GENE-990910-10]
59. si:dkeyp-33c10.5 11 1 - - - - - 1.000 - - - si:dkeyp-33c10.5, transcript variant X2
60. si:ch211-188i4.4 5 1 - - - - - - - 1.000 - si:ch211-188i4.4, transcript variant X3
61. si:dkey-222e15.4 10 1 - - - - - - - 1.000 - si:dkey-222e15.4, transcript variant X4
62. BX005294.2 ENSDARG00000109361 3 1 - - - - - 1.000 - - -
63. si:dkey-256i11.4 si:dkey-256i11.4 3 1 - - - - - - - 1.000 -
64. xcr1a xcr1a 3 1 - - - - - 1.000 - - -
65. ZBED1_5 ZBED1_5 1 1 - - - - - - - 1.000 -
66. cyp2n13 ENSDARG00000042953 10 1 - - - - - 1.000 - - - cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
67. si:ch73-334d15.4 ENSDARG00000056502 0 1 - - - - - - - 1.000 - si:ch73-334d15.4 [Source:ZFIN;Acc:ZDB-GENE-091204-184]
68. BX897747.3 BX897747.3 0 1 - - - - - - - 1.000 -
69. si:ch211-146g19.1 si:ch211-146g19.1 1 1 - - - - - - - - 1.000
70. 5S_rRNA_15 5S_rRNA_15 9 1 - - - - - 1.000 - - -
71. IKZF4 ENSDARG00000037068 36 1 - - - - - 1.000 - - - IKAROS family zinc finger 4 [Source:ZFIN;Acc:ZDB-GENE-180319-1]
72. zgc:113263 ENSDARG00000045842 51 1 - - - - - 1.000 - - - zgc:113263 [Source:ZFIN;Acc:ZDB-GENE-050306-34]
73. zgc:77112 ENSDARG00000015657 24 1 - - - - - 1.000 - - - zgc:77112 [Source:ZFIN;Acc:ZDB-GENE-040426-2219]
74. GTF3A GTF3A 6 1 - - - - - - - - 1.000
75. si:ch211-249h16.8 ENSDARG00000093630 1 1 - - - - - - - 1.000 - si:ch211-249h16.8 [Source:ZFIN;Acc:ZDB-GENE-090311-36]
76. U1_22 U1_22 0 1 - - - - - - - 1.000 -
77. wfs1b ENSDARG00000074617 69 1 - - - - - 1.000 - - - Wolfram syndrome 1b (wolframin) [Source:ZFIN;Acc:ZDB-GENE-050809-19]
78. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1 - - - - - - - 1.000 - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
79. TMEM220 ENSDARG00000088981 28 1 - - - - - - - 1.000 - transmembrane protein 220 [Source:ZFIN;Acc:ZDB-GENE-131121-194]
80. CR854907.1 ENSDARG00000097386 1 1 - - - - - - - - 1.000
81. JAKMIP1 ENSDARG00000076090 55 1 - - - - - 1.000 - - - janus kinase and microtubule interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-110208-7]
82. GALNT8_1 GALNT8_1 10 1 - - - - - - - 1.000 -
83. zgc:194210 ENSDARG00000073799, ENSDARG00000115078 100 1 - - - - - 1.000 - - - zgc:194210 [Source:ZFIN;Acc:ZDB-GENE-030131-2476]
84. si:ch73-94f11.5 si:ch73-94f11.5 6 1 - - - - - 1.000 - - -
85. ENSDARG00000087581 ENSDARG00000087581 2 1 - - - - - - - - 1.000
86. psmb11 psmb11 5 1 - - - - - 1.000 - - -
87. wnt10b ENSDARG00000040925 162 1 - - - - - 1.000 - - - wingless-type MMTV integration site family, member 10b [Source:ZFIN;Acc:ZDB-GENE-980526-524]
88. CR848664.1 CR848664.1 12 1 - - - - - - - 1.000 -
89. si:dkey-222f2.3 si:dkey-222f2.3 8 1 - - - - - - - 1.000 -
90. si:ch211-42d10.5 si:ch211-42d10.5 17 1 - - - - - - - 1.000 -
91. BX323448.1 ENSDARG00000116236 10 1 - - - - - 1.000 - - -
92. rhbdd3 ENSDARG00000079816 2 1 - - - - - 1.000 - - - rhomboid domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-39]
93. BX537350.1 BX537350.1 8 1 - - - - - - - - 1.000
94. HIST2H4B HIST2H4B 9 1 - - - - - - - - 1.000
95. BX248324.1 ENSDARG00000096489 3 1 - - - - - 1.000 - - -
96. si:dkey-199l1.1 si:dkey-199l1.1 7 1 - - - - - - - 1.000 -
97. C3H17orf104 C3H17orf104 16 1 - - - - - - - 1.000 -
98. scn1ba ENSDARG00000060222, ENSDARG00000115181 76 1 - - - - - 1.000 - - - sodium channel, voltage-gated, type I, beta a [Source:ZFIN;Acc:ZDB-GENE-060503-604]
99. GAS2 18 1 - - - - - 1.000 - - - growth arrest specific 2, transcript variant X1
100. purg ENSDARG00000099187, ENSDARG00000114450 33 1 - - - - - 1.000 - - - purine-rich element binding protein G [Source:ZFIN;Acc:ZDB-GENE-070702-3]

There are 604 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA