Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for lmo7b

Gene Name Gene ID Reads Annotation
lmo7b ENSDARG00000053535 314 LIM domain 7b [Source:ZFIN;Acc:ZDB-GENE-060825-242]










Genes with expression patterns similar to lmo7b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lmo7b ENSDARG00000053535 314 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 LIM domain 7b [Source:ZFIN;Acc:ZDB-GENE-060825-242]
2. DUSP26 ENSDARG00000103752 404 1.675 - - - - - 0.749 0.926 - - dual specificity phosphatase 26 [Source:HGNC Symbol;Acc:HGNC:28161]
3. kbtbd12 ENSDARG00000001882 1196 1.54 - - - - - 0.776 0.764 - - kelch repeat and BTB (POZ) domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-050904-1]
4. sfrp2 ENSDARG00000070050, ENSDARG00000114620 1681 1.523 - - - - 0.707 - 0.816 - - secreted frizzled-related protein 2 [Source:ZFIN;Acc:ZDB-GENE-061013-293]
5. usp2a ENSDARG00000020107 2586 1.493 - - - - - 0.751 0.742 - - ubiquitin specific peptidase 2a [Source:ZFIN;Acc:ZDB-GENE-041212-59]
6. dok7 ENSDARG00000060236 364 1.488 - - - - - 0.769 0.719 - - docking protein 7 [Source:ZFIN;Acc:ZDB-GENE-090312-103]
7. pak1 ENSDARG00000103959 32 1.477 0.739 - - - - - 0.738 - - p21 protein (Cdc42/Rac)-activated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030826-29]
8. cmya5 ENSDARG00000061379 1423 1.464 - 0.724 - - - 0.740 - - - cardiomyopathy associated 5 [Source:ZFIN;Acc:ZDB-GENE-070630-1]
9. lin7a ENSDARG00000013414 1589 1.447 0.723 0.724 - - - - - - - lin-7 homolog A (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-1665]
10. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 1.442 - - - - - 0.718 0.724 - - LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
11. sprb ENSDARG00000058553 1694 1.418 - - - - - 0.711 0.707 - - sepiapterin reductase b [Source:ZFIN;Acc:ZDB-GENE-070719-1]
12. adra2b ENSDARG00000102096 121 0.909 - - - - - - 0.909 - - adrenoceptor alpha 2B [Source:ZFIN;Acc:ZDB-GENE-021010-2]
13. CABZ01052953.2 CABZ01052953.2 125 0.9 - - - - - - 0.900 - -
14. slc8a3 ENSDARG00000004931 338 0.887 - - - - - - 0.887 - - solute carrier family 8 (sodium/calcium exchanger), member 3 [Source:ZFIN;Acc:ZDB-GENE-050810-1]
15. pdlim7 ENSDARG00000103854 465 0.882 - - - - - - 0.882 - - PDZ and LIM domain 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2092]
16. ZCCHC2 ENSDARG00000067950 204 0.88 - - - - - - 0.880 - - zinc finger, CCHC domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070912-269]
17. ikzf5 ENSDARG00000056491, ENSDARG00000116693 686 0.87 - 0.870 - - - - - - - IKAROS family zinc finger 5 [Source:ZFIN;Acc:ZDB-GENE-040801-209]
18. ppp1r1c ENSDARG00000038941 265 0.87 0.870 - - - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 1C [Source:ZFIN;Acc:ZDB-GENE-040718-273]
19. myha ENSDARG00000095930 143 0.869 - - - - - - 0.869 - - myosin, heavy chain a [Source:ZFIN;Acc:ZDB-GENE-060531-50]
20. si:dkey-243i1.1 ENSDARG00000034227 257 0.863 - 0.863 - - - - - - - si:dkey-243i1.1 [Source:ZFIN;Acc:ZDB-GENE-030131-6399]
21. grip2a ENSDARG00000087187 401 0.857 - - - - - - 0.857 - - glutamate receptor interacting protein 2a [Source:ZFIN;Acc:ZDB-GENE-081104-132]
22. col5a3a_1 ENSDARG00000098294 271 0.854 - - - - - - 0.854 - - collagen, type V, alpha 3a [Source:ZFIN;Acc:ZDB-GENE-030131-968]
23. carm1l ENSDARG00000091531 13 0.851 - - - - - - 0.851 - - coactivator-associated arginine methyltransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-090312-219]
24. CU302436.3 CU302436.3 174 0.85 - 0.850 - - - - - - -
25. adrm1 ENSDARG00000058560, ENSDARG00000113912 1728 0.846 - 0.846 - - - - - - - adhesion regulating molecule 1 [Source:ZFIN;Acc:ZDB-GENE-040426-905]
26. CABZ01090021.1 CABZ01090021.1 655 0.845 - - - - - - 0.845 - -
27. lims2 ENSDARG00000014976 1248 0.841 - - - - - - 0.841 - - LIM and senescent cell antigen-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-050522-56]
28. pabpc4 ENSDARG00000059259, ENSDARG00000111312 2392 0.838 - - - - - - 0.838 - - poly(A) binding protein, cytoplasmic 4 (inducible form) [Source:ZFIN;Acc:ZDB-GENE-030131-9663]
29. rbm24b ENSDARG00000031809, ENSDARG00000110167 2404 0.837 - - - - - - 0.837 - - RNA binding motif protein 24b [Source:ZFIN;Acc:ZDB-GENE-060312-43]
30. vegfab ENSDARG00000034700 366 0.834 - - - - - - 0.834 - - vascular endothelial growth factor Ab [Source:ZFIN;Acc:ZDB-GENE-030131-4605]
31. si:dkeyp-20e4.3 si:dkeyp-20e4.3 68 0.832 0.832 - - - - - - - -
32. phex ENSDARG00000062363 1413 0.832 - - - - - - 0.832 - - phosphate regulating endopeptidase homolog, X-linked [Source:ZFIN;Acc:ZDB-GENE-030103-2]
33. guk1a ENSDARG00000030340 517 0.829 - 0.829 - - - - - - - guanylate kinase 1a [Source:ZFIN;Acc:ZDB-GENE-040625-130]
34. msi1 ENSDARG00000010710 2634 0.829 - 0.829 - - - - - - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
35. pvalb7 ENSDARG00000034705, ENSDARG00000109277 221 0.829 - - - - - - 0.829 - - parvalbumin 7 [Source:ZFIN;Acc:ZDB-GENE-040718-285]
36. polr1d ENSDARG00000037570 860 0.828 - - - - - - 0.828 - - RNA polymerase I and III subunit D [Source:ZFIN;Acc:ZDB-GENE-040930-4]
37. CDCA7L CDCA7L 1365 0.827 - 0.827 - - - - - - -
38. NTN5 ENSDARG00000036422 371 0.826 - - - - - - 0.826 - - netrin 5 [Source:ZFIN;Acc:ZDB-GENE-130530-593]
39. tfdp2 ENSDARG00000042835 1985 0.825 - 0.825 - - - - - - - transcription factor Dp-2 [Source:ZFIN;Acc:ZDB-GENE-030219-104]
40. ZDHHC20 ZDHHC20 366 0.821 - 0.821 - - - - - - -
41. twf2a ENSDARG00000094792 687 0.817 - - - - - - 0.817 - - twinfilin actin-binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7638]
42. fxr1 ENSDARG00000022968 2831 0.816 - - - - - - 0.816 - - fragile X mental retardation, autosomal homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5431]
43. znf236 ENSDARG00000095890 410 0.816 - 0.816 - - - - - - - zinc finger protein 236 [Source:ZFIN;Acc:ZDB-GENE-041111-195]
44. si:ch211-14c7.2 ENSDARG00000094522 369 0.816 0.816 - - - - - - - - si:ch211-14c7.2 [Source:ZFIN;Acc:ZDB-GENE-060503-856]
45. FBF1_1 FBF1_1 86 0.812 0.812 - - - - - - - -
46. mir148 75 0.812 - - - - - - 0.812 - - microRNA 148
47. si:ch211-139k8.2 143 0.81 - 0.810 - - - - - - - si:ch211-139k8.2, transcript variant X4
48. btbd2 btbd2 1296 0.81 0.810 - - - - - - - -
49. synpo2b ENSDARG00000077157 1009 0.809 - - - - - 0.809 - - - synaptopodin 2b [Source:ZFIN;Acc:ZDB-GENE-101230-1]
50. fgf6b ENSDARG00000045856 136 0.808 - - - - - - 0.808 - - fibroblast growth factor 6b [Source:ZFIN;Acc:ZDB-GENE-050201-5]
51. smyd2a ENSDARG00000055151 2505 0.808 - - - - - 0.808 - - - SET and MYND domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050320-126]
52. si:dkey-181m9.5 si:dkey-181m9.5 1079 0.808 - - - - - - 0.808 - -
53. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 0.807 - 0.807 - - - - - - - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
54. si:dkeyp-68b7.10 ENSDARG00000095024 273 0.807 - - - - - 0.807 - - - si:dkeyp-68b7.10 [Source:ZFIN;Acc:ZDB-GENE-070912-667]
55. MPV17L MPV17L 39 0.807 - - - - - - 0.807 - -
56. si:dkey-106c17.1 si:dkey-106c17.1 26 0.807 - - - - - - 0.807 - -
57. snoR38 snoR38 1068 0.805 0.805 - - - - - - - -
58. zgc:112175 ENSDARG00000037810 402 0.805 - 0.805 - - - - - - - zgc:112175 [Source:ZFIN;Acc:ZDB-GENE-050417-220]
59. acsl4l acsl4l 540 0.804 - 0.804 - - - - - - -
60. PITPNC1 ENSDARG00000099260 1096 0.803 - - - - - - 0.803 - - phosphatidylinositol transfer protein cytoplasmic 1 [Source:HGNC Symbol;Acc:HGNC:21045]
61. lrrc8c ENSDARG00000099911 1499 0.803 - 0.803 - - - - - - - leucine rich repeat containing 8 VRAC subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-2965]
62. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 0.803 - 0.803 - - - - - - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
63. prim1 ENSDARG00000040163 909 0.802 - 0.802 - - - - - - - DNA primase subunit 1 [Source:ZFIN;Acc:ZDB-GENE-990603-6]
64. elna 38 0.802 - - - - - - 0.802 - - elastin a, transcript variant X20
65. THSD1 ENSDARG00000075273, ENSDARG00000112294 228 0.8 - - - - - - 0.800 - - thrombospondin, type I, domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100105-3]
66. vash2 ENSDARG00000007774 2537 0.8 - - - - - - 0.800 - - vasohibin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-355]
67. ERBB4_1 ERBB4_1 1064 0.799 - - - - - - 0.799 - -
68. bmpr1ba ENSDARG00000104100 828 0.798 - - - - - - 0.798 - - bone morphogenetic protein receptor, type IBa [Source:ZFIN;Acc:ZDB-GENE-991208-8]
69. ablim2 ENSDARG00000055223 1934 0.798 - - - - - - 0.798 - - actin binding LIM protein family, member 2 [Source:ZFIN;Acc:ZDB-GENE-100316-5]
70. zgc:73228 zgc:73228 97 0.796 0.796 - - - - - - - -
71. zfx ENSDARG00000074453 453 0.796 - - - - - - 0.796 - - zinc finger protein X-linked [Source:ZFIN;Acc:ZDB-GENE-061220-2]
72. spata4 ENSDARG00000036189, ENSDARG00000114468 118 0.795 - - - - - - 0.795 - - spermatogenesis associated 4 [Source:ZFIN;Acc:ZDB-GENE-050417-153]
73. larp4b ENSDARG00000062146 1601 0.795 - 0.795 - - - - - - - La ribonucleoprotein domain family, member 4B [Source:ZFIN;Acc:ZDB-GENE-061027-39]
74. BAALC 250 0.795 - 0.795 - - - - - - - brain and acute leukemia, cytoplasmic
75. CU151895.1 CU151895.1 103 0.794 - - - - - - 0.794 - -
76. phf23b ENSDARG00000036305 1073 0.793 - - - - - 0.793 - - - PHD finger protein 23b [Source:ZFIN;Acc:ZDB-GENE-030131-5895]
77. dhx32a ENSDARG00000077461 141 0.793 - - - - - - 0.793 - - DEAH (Asp-Glu-Ala-His) box polypeptide 32a [Source:ZFIN;Acc:ZDB-GENE-130613-6]
78. SLC37A4 SLC37A4 10 0.792 - - - - - - 0.792 - -
79. ifrd2 ENSDARG00000036811, ENSDARG00000115385 3697 0.792 - 0.792 - - - - - - - interferon-related developmental regulator 2 [Source:ZFIN;Acc:ZDB-GENE-040801-140]
80. acot9.2 ENSDARG00000058390, ENSDARG00000113544 438 0.791 - - - - - - 0.791 - - acyl-CoA thioesterase 9, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-051113-136]
81. TMPRSS5 ENSDARG00000087717 54 0.79 - - - - - - 0.790 - - transmembrane serine protease 5 [Source:ZFIN;Acc:ZDB-GENE-131121-184]
82. aak1 aak1 81 0.789 - - - - - - 0.789 - -
83. C18H19orf12 C18H19orf12 432 0.789 - 0.789 - - - - - - -
84. ppp1r3cb ENSDARG00000014554 2507 0.788 - - - - - - 0.788 - - protein phosphatase 1, regulatory subunit 3Cb [Source:ZFIN;Acc:ZDB-GENE-040426-1733]
85. U2_6 U2_6 1155 0.788 - 0.788 - - - - - - -
86. lama2 ENSDARG00000099390 24734 0.788 - - - - - - 0.788 - - laminin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-060119-1]
87. atp1b3b ENSDARG00000042837 5163 0.787 - - - - - - 0.787 - - ATPase Na+/K+ transporting subunit beta 3b [Source:ZFIN;Acc:ZDB-GENE-001127-1]
88. actc1a ENSDARG00000042535, ENSDARG00000076126, ENSDARG00000116925 6499 0.786 - - - - - - 0.786 - - actin, alpha, cardiac muscle 1a [Source:ZFIN;Acc:ZDB-GENE-040520-4]
89. zgc:195001 ENSDARG00000070484 3281 0.786 - - - - - - 0.786 - - zgc:195001 [Source:ZFIN;Acc:ZDB-GENE-081022-173]
90. si:dkey-78a14.4 ENSDARG00000036066 17 0.785 - - - - - - 0.785 - - si:dkey-78a14.4 [Source:ZFIN;Acc:ZDB-GENE-110408-8]
91. FP103059.1 FP103059.1 750 0.785 - 0.785 - - - - - - -
92. FAM78A FAM78A 61 0.785 - - - - - - 0.785 - -
93. ppapdc3 ppapdc3 4924 0.784 - - - - - - 0.784 - -
94. cyp1d1 ENSDARG00000035569 628 0.784 - - - - - - 0.784 - - cytochrome P450, family 1, subfamily D, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-041114-179]
95. sult1st6 ENSDARG00000006811 31 0.784 0.784 - - - - - - - - sulfotransferase family 1, cytosolic sulfotransferase 6 [Source:ZFIN;Acc:ZDB-GENE-040718-343]
96. BX927164.2 BX927164.2 279 0.784 0.784 - - - - - - - -
97. zgc:85910 zgc:85910 299 0.783 0.783 - - - - - - - -
98. irs2 irs2 392 0.783 - 0.783 - - - - - - -
99. smpx ENSDARG00000045302 2175 0.783 - - - - - - 0.783 - - small muscle protein X-linked [Source:ZFIN;Acc:ZDB-GENE-040704-24]
100. KLHL30 ENSDARG00000076094 366 0.782 - - - - - - 0.782 - - kelch-like family member 30 [Source:ZFIN;Acc:ZDB-GENE-100913-2]

There are 433 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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