Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for lmo4b

Gene Name Gene ID Reads Annotation
lmo4b ENSDARG00000054749, ENSDARG00000115402 1397 LIM domain only 4b [Source:ZFIN;Acc:ZDB-GENE-030131-3570]










Genes with expression patterns similar to lmo4b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lmo4b ENSDARG00000054749, ENSDARG00000115402 1397 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 LIM domain only 4b [Source:ZFIN;Acc:ZDB-GENE-030131-3570]
2. cplx4b ENSDARG00000059486 3192 2.832 0.949 0.895 - - - 0.988 - - - complexin 4b [Source:ZFIN;Acc:ZDB-GENE-070705-157]
3. axin2 ENSDARG00000100149 4223 2.604 - 0.829 - - - 0.987 - 0.788 - axin 2 (conductin, axil) [Source:ZFIN;Acc:ZDB-GENE-000403-2]
4. stk38a ENSDARG00000019973 1343 1.987 0.992 - - - - 0.995 - - - serine/threonine kinase 38a [Source:ZFIN;Acc:ZDB-GENE-040426-2811]
5. ppp1r3ca ENSDARG00000071005, ENSDARG00000111817, ENSDARG00000112962 2641 1.954 0.974 - - - - 0.980 - - - protein phosphatase 1, regulatory subunit 3Ca [Source:ZFIN;Acc:ZDB-GENE-040718-70]
6. chmp2bb ENSDARG00000002190 4629 1.925 0.981 - - - - 0.944 - - - charged multivesicular body protein 2Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2539]
7. CLDN23 CLDN23 2002 1.881 0.929 - - - - 0.952 - - -
8. gpx4b ENSDARG00000076836 8085 1.87 0.926 - - - - 0.944 - - - glutathione peroxidase 4b [Source:ZFIN;Acc:ZDB-GENE-030410-3]
9. mier1a ENSDARG00000041072 1690 1.867 - - - - - 0.994 - 0.873 - mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]
10. mgst2 ENSDARG00000071345 5626 1.863 0.891 - - - - 0.972 - - - microsomal glutathione S-transferase 2 [Source:ZFIN;Acc:ZDB-GENE-060616-94]
11. rnf13 ENSDARG00000019438 1560 1.849 - - - - - 0.993 - 0.856 - ring finger protein 13 [Source:ZFIN;Acc:ZDB-GENE-040426-772]
12. TOM1L2 ENSDARG00000056394 793 1.831 0.996 - - - - - - 0.835 - target of myb1 like 2 membrane trafficking protein [Source:HGNC Symbol;Acc:HGNC:11984]
13. TTL ENSDARG00000062418 3043 1.814 - 0.827 - - - 0.987 - - - tubulin tyrosine ligase [Source:ZFIN;Acc:ZDB-GENE-060929-608]
14. si:dkeyp-110e4.6 ENSDARG00000061845 1755 1.808 - - - - - 0.985 - 0.823 - si:dkeyp-110e4.6 [Source:ZFIN;Acc:ZDB-GENE-030219-75]
15. wu:fq41a10 wu:fq41a10 7009 1.805 0.895 - - - - 0.910 - - -
16. gfpt2 ENSDARG00000044094 2503 1.803 0.911 - - - - 0.892 - - - glutamine-fructose-6-phosphate transaminase 2 [Source:ZFIN;Acc:ZDB-GENE-071113-1]
17. pelo ENSDARG00000055477 1927 1.797 0.957 - - - - - - 0.840 - pelota mRNA surveillance and ribosome rescue factor [Source:ZFIN;Acc:ZDB-GENE-040426-1074]
18. lrrc40 ENSDARG00000017708 1156 1.791 0.960 - - - - - - 0.831 - leucine rich repeat containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-6062]
19. Mar-07 Mar-07 2926 1.783 - - - - - 0.987 - 0.796 -
20. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 1.782 0.961 - - - - 0.821 - - - splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
21. ube2e1 ENSDARG00000116649 10656 1.779 0.939 0.840 - - - - - - - ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
22. tspan14 ENSDARG00000055938, ENSDARG00000117111 4518 1.764 0.990 - - - - - 0.774 - - tetraspanin 14 [Source:ZFIN;Acc:ZDB-GENE-060825-329]
23. stk40 ENSDARG00000098135 2683 1.759 - 0.771 - - - 0.988 - - - serine/threonine kinase 40 [Source:ZFIN;Acc:ZDB-GENE-030131-4831]
24. zgc:92066 ENSDARG00000031776, ENSDARG00000116586 12826 1.755 0.849 - - - - 0.906 - - - zgc:92066 [Source:ZFIN;Acc:ZDB-GENE-040718-72]
25. znf280d ENSDARG00000077013 1387 1.751 - - - - - 0.992 - 0.759 - zinc finger protein 280D [Source:ZFIN;Acc:ZDB-GENE-030131-2260]
26. BAHD1 ENSDARG00000086789 1194 1.749 0.994 0.755 - - - - - - - bromo adjacent homology domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120411-42]
27. nkd1 ENSDARG00000020053 4450 1.748 - - - - - 0.982 - 0.766 - naked cuticle homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-061108-3]
28. zgc:55733 ENSDARG00000103845 1550 1.745 0.993 - - - - - - 0.752 - zgc:55733 [Source:ZFIN;Acc:ZDB-GENE-040426-791]
29. palm3 ENSDARG00000071215 1776 1.742 - 0.752 - - - 0.990 - - - paralemmin 3 [Source:ZFIN;Acc:ZDB-GENE-061215-74]
30. zgc:112964 ENSDARG00000101200 4751 1.742 0.818 - - - - 0.924 - - - zgc:112964 [Source:ZFIN;Acc:ZDB-GENE-050306-47]
31. kdm1a ENSDARG00000060679 6152 1.741 - - - - - 0.985 - 0.756 - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
32. arhgef12b ENSDARG00000100913 1358 1.734 0.997 0.737 - - - - - - - Rho guanine nucleotide exchange factor (GEF) 12b [Source:ZFIN;Acc:ZDB-GENE-070705-36]
33. zfand5a ENSDARG00000018898 3308 1.718 - 0.729 - - - 0.989 - - - zinc finger, AN1-type domain 5a [Source:ZFIN;Acc:ZDB-GENE-040426-1979]
34. ptgdsb ptgdsb 5200 1.716 - 0.823 - - - 0.893 - - -
35. mapk3 ENSDARG00000070573 6842 1.705 0.898 0.807 - - - - - - - mitogen-activated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-040121-1]
36. arpc1a ENSDARG00000008383 7353 1.7 0.879 0.821 - - - - - - - actin related protein 2/3 complex, subunit 1A [Source:ZFIN;Acc:ZDB-GENE-040116-1]
37. TTYH3 TTYH3 1841 1.7 - - - - - 0.991 - 0.709 -
38. wipi1 ENSDARG00000040657 2732 1.694 0.935 0.759 - - - - - - - WD repeat domain, phosphoinositide interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1404]
39. PRODH2 PRODH2 1153 1.692 0.929 0.763 - - - - - - -
40. si:dkey-228b2.5 1760 1.691 0.954 0.737 - - - - - - - si:dkey-228b2.5
41. ube2d1a ENSDARG00000029107, ENSDARG00000111656 3658 1.68 0.978 - - - - - - 0.702 - ubiquitin-conjugating enzyme E2D 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1609]
42. gclm ENSDARG00000018953 1712 1.678 0.977 - - - - - - 0.701 - glutamate-cysteine ligase, modifier subunit [Source:ZFIN;Acc:ZDB-GENE-030131-5906]
43. ier5 ENSDARG00000009881, ENSDARG00000111680 11432 1.662 0.898 0.764 - - - - - - - immediate early response 5 [Source:ZFIN;Acc:ZDB-GENE-030616-127]
44. poc1bl ENSDARG00000012745 2451 1.628 - 0.720 - - - 0.908 - - - POC1 centriolar protein homolog B (Chlamydomonas), like [Source:ZFIN;Acc:ZDB-GENE-050306-41]
45. mgaa ENSDARG00000078784 1344 1.621 - 0.782 - - - - - 0.839 - MGA, MAX dimerization protein a [Source:ZFIN;Acc:ZDB-GENE-030603-1]
46. dynll1 ENSDARG00000058454 33932 1.613 0.706 - - - - 0.907 - - - dynein, light chain, LC8-type 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1961]
47. RPS6KC1 ENSDARG00000104103 746 1.601 - 0.747 - - - - - 0.854 - ribosomal protein S6 kinase polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-081031-83]
48. KRT18 ENSDARG00000018404, ENSDARG00000109528 6022 1.585 0.882 0.703 - - - - - - - keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
49. nr1h3 ENSDARG00000098439 859 1.581 - - - - - - 0.716 0.865 - nuclear receptor subfamily 1, group H, member 3 [Source:ZFIN;Acc:ZDB-GENE-050410-7]
50. zgc:158387 zgc:158387 9147 1.58 - - - - - 0.837 - 0.743 -
51. srgap2a srgap2a 7197 1.58 - 0.802 - - - 0.778 - - -
52. BX005175.1 ENSDARG00000112442 441 1.578 - 0.862 - - - - - 0.716 - protein kinase C, delta b [Source:NCBI gene;Acc:100150844]
53. zfyve21 ENSDARG00000027887 1687 1.568 - 0.733 - - - - - 0.835 - zinc finger, FYVE domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-030131-1296]
54. E2F6 E2F6 1271 1.561 - - - - - - 0.733 0.828 -
55. ptgs2b ENSDARG00000010276 692 1.56 0.745 0.815 - - - - - - - prostaglandin-endoperoxide synthase 2b [Source:ZFIN;Acc:ZDB-GENE-041014-323]
56. rab11fip4a ENSDARG00000090170 839 1.555 - 0.750 - - - - - 0.805 - RAB11 family interacting protein 4 (class II) a [Source:ZFIN;Acc:ZDB-GENE-040718-266]
57. samd11 ENSDARG00000077852 631 1.554 - - - - - - 0.743 0.811 - sterile alpha motif domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-060428-2]
58. gstp1 ENSDARG00000104068 12698 1.535 0.817 0.718 - - - - - - - glutathione S-transferase pi 1 [Source:ZFIN;Acc:ZDB-GENE-020806-4]
59. dnajc5ga ENSDARG00000041896 1478 1.521 - - - - - - 0.702 0.819 - DnaJ (Hsp40) homolog, subfamily C, member 5 gamma a [Source:ZFIN;Acc:ZDB-GENE-030131-1583]
60. si:dkey-92i17.2 ENSDARG00000093612 707 1.519 - 0.763 - - - - - 0.756 - si:dkey-92i17.2 [Source:ZFIN;Acc:ZDB-GENE-030131-6759]
61. get4 ENSDARG00000024398 1818 1.509 - 0.757 - - - - 0.752 - - golgi to ER traffic protein 4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5399]
62. dnmbp ENSDARG00000074121 2711 1.504 - 0.792 - - - - - 0.712 - dynamin binding protein [Source:ZFIN;Acc:ZDB-GENE-101026-2]
63. alg11 ENSDARG00000031202, ENSDARG00000110001 308 1.492 - 0.712 - - - - - 0.780 - asparagine-linked glycosylation 11 (alpha-1,2-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-030131-7282]
64. trrap ENSDARG00000100623 3429 1.482 - 0.782 - - - - - 0.700 - transformation/transcription domain-associated protein [Source:ZFIN;Acc:ZDB-GENE-050809-47]
65. CU856359.1 CU856359.1 517 1.472 - 0.732 - - - - 0.740 - -
66. tmem68 ENSDARG00000086737 209 1.462 - 0.750 - 0.712 - - - - - transmembrane protein 68 [Source:ZFIN;Acc:ZDB-GENE-040426-1267]
67. tbx2a ENSDARG00000018025, ENSDARG00000109541 1183 1.458 - 0.742 - - - - - - 0.716 T-box 2a [Source:ZFIN;Acc:ZDB-GENE-990917-4]
68. man1a1 ENSDARG00000005652 877 1.426 - 0.715 - - - - - 0.711 - mannosidase, alpha, class 1A, member 1 [Source:ZFIN;Acc:ZDB-GENE-041014-321]
69. sbf1 ENSDARG00000062968, ENSDARG00000111535 1287 0.999 0.999 - - - - - - - - SET binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-040718-139]
70. zgc:153924 507 0.998 - - - - - 0.998 - - - zgc:153924
71. nab1b ENSDARG00000040700 289 0.998 0.998 - - - - - - - - NGFI-A binding protein 1b (EGR1 binding protein 1) [Source:ZFIN;Acc:ZDB-GENE-081105-85]
72. evi5b ENSDARG00000070839 239 0.998 0.998 - - - - - - - - ecotropic viral integration site 5b [Source:ZFIN;Acc:ZDB-GENE-041111-244]
73. si:dkey-10f21.16 si:dkey-10f21.16 252 0.998 0.998 - - - - - - - -
74. ypel2b ENSDARG00000087258, ENSDARG00000116766 539 0.998 0.998 - - - - - - - - yippee-like 2b [Source:ZFIN;Acc:ZDB-GENE-110419-2]
75. RMDN2 ENSDARG00000078761 717 0.998 - - - - - 0.998 - - - regulator of microtubule dynamics 2 [Source:ZFIN;Acc:ZDB-GENE-111223-1]
76. tfcp2 ENSDARG00000060306 1024 0.998 0.998 - - - - - - - - transcription factor CP2 [Source:ZFIN;Acc:ZDB-GENE-030131-2523]
77. ENSDARG00000076021 ENSDARG00000076021 162 0.998 0.998 - - - - - - - -
78. wu:fj13e08 1223 0.998 0.998 - - - - - - - - wu:fj13e08
79. si:ch211-71m22.1 ENSDARG00000058638 169 0.998 0.998 - - - - - - - - si:ch211-71m22.1 [Source:ZFIN;Acc:ZDB-GENE-070705-193]
80. ENSDARG00000090222 ENSDARG00000090222 402 0.998 0.998 - - - - - - - -
81. TTC9 ENSDARG00000074363 196 0.998 0.998 - - - - - - - - tetratricopeptide repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20267]
82. ppcs ENSDARG00000061889 224 0.998 0.998 - - - - - - - - phosphopantothenoylcysteine synthetase [Source:ZFIN;Acc:ZDB-GENE-060512-104]
83. IRF2 ENSDARG00000040465 453 0.997 0.997 - - - - - - - - interferon regulatory factor 2 [Source:ZFIN;Acc:ZDB-GENE-041212-38]
84. adrb2b ENSDARG00000054510, ENSDARG00000111730 428 0.997 0.997 - - - - - - - - adrenoceptor beta 2, surface b [Source:ZFIN;Acc:ZDB-GENE-070410-32]
85. wdtc1 ENSDARG00000059760 1218 0.997 0.997 - - - - - - - - WD and tetratricopeptide repeats 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3224]
86. si:dkey-221j11.3 ENSDARG00000093304 1001 0.997 - - - - - 0.997 - - - si:dkey-221j11.3 [Source:ZFIN;Acc:ZDB-GENE-090313-247]
87. sos1 ENSDARG00000100503 388 0.997 0.997 - - - - - - - - son of sevenless homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070209-128]
88. MRAS_1 ENSDARG00000075285 318 0.997 0.997 - - - - - - - - muscle RAS oncogene homolog [Source:HGNC Symbol;Acc:HGNC:7227]
89. FAM210A FAM210A 437 0.997 0.997 - - - - - - - -
90. timm10b ENSDARG00000043898 1233 0.997 0.997 - - - - - - - - translocase of inner mitochondrial membrane 10 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-370]
91. amer1 ENSDARG00000079624, ENSDARG00000117033 1370 0.997 0.997 - - - - - - - - APC membrane recruitment protein 1 [Source:ZFIN;Acc:ZDB-GENE-070719-2]
92. pfkfb3 ENSDARG00000001953 656 0.997 0.997 - - - - - - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2724]
93. MYADML2 ENSDARG00000053953 810 0.997 0.997 - - - - - - - - myeloid-associated differentiation marker-like 2 [Source:ZFIN;Acc:ZDB-GENE-120807-3]
94. epc1 epc1 1164 0.997 - - - - - 0.997 - - -
95. armc8 ENSDARG00000062258, ENSDARG00000110157 467 0.997 0.997 - - - - - - - - armadillo repeat containing 8 [Source:ZFIN;Acc:ZDB-GENE-061027-88]
96. poll ENSDARG00000039613 395 0.997 0.997 - - - - - - - - polymerase (DNA directed), lambda [Source:ZFIN;Acc:ZDB-GENE-040426-2712]
97. mlst8 ENSDARG00000003167, ENSDARG00000116280 541 0.996 - - - - - 0.996 - - - MTOR associated protein, LST8 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6176]
98. HOMEZ HOMEZ 1824 0.996 0.996 - - - - - - - -
99. crfb17 511 0.996 - - - - - 0.996 - - - cytokine receptor family member B17
100. sox7 ENSDARG00000030125 806 0.996 - - - - - 0.996 - - - SRY (sex determining region Y)-box 7 [Source:ZFIN;Acc:ZDB-GENE-040109-4]

There are 1390 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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