Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for lmo4a

Gene Name Gene ID Reads Annotation
lmo4a ENSDARG00000013853, ENSDARG00000111873, ENSDARG00000113473 2584 LIM domain only 4a [Source:ZFIN;Acc:ZDB-GENE-010702-1]










Genes with expression patterns similar to lmo4a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lmo4a ENSDARG00000013853, ENSDARG00000111873, ENSDARG00000113473 2584 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 LIM domain only 4a [Source:ZFIN;Acc:ZDB-GENE-010702-1]
2. mrps25 ENSDARG00000041306 3654 2.526 - 0.820 0.841 - - - - - 0.865 mitochondrial ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-050417-52]
3. uck2b ENSDARG00000022213 1542 2.401 0.789 0.803 - - - - 0.809 - - uridine-cytidine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5265]
4. nfs1 ENSDARG00000062237 2741 2.261 - 0.717 - - - - 0.742 - 0.802 NFS1 cysteine desulfurase [Source:ZFIN;Acc:ZDB-GENE-060405-1]
5. klf15 ENSDARG00000091127 1037 2.225 - 0.717 0.786 - - - - - 0.722 Kruppel-like factor 15 [Source:ZFIN;Acc:ZDB-GENE-030131-7844]
6. hopx ENSDARG00000089368 2342 1.687 - 0.700 - - - 0.987 - - - HOP homeobox [Source:ZFIN;Acc:ZDB-GENE-031016-2]
7. plcg1 ENSDARG00000038442 5324 1.679 - 0.818 0.861 - - - - - - phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
8. fzd7b ENSDARG00000027589 2562 1.677 0.789 - - - - - - 0.888 - frizzled class receptor 7b [Source:ZFIN;Acc:ZDB-GENE-990415-229]
9. pelo ENSDARG00000055477 1927 1.677 - - 0.855 - - - - - 0.822 pelota mRNA surveillance and ribosome rescue factor [Source:ZFIN;Acc:ZDB-GENE-040426-1074]
10. CASKIN2_1 CASKIN2_1 2299 1.67 - - - - - - - 0.845 0.825
11. tceb1a 969 1.667 0.819 - - - - - - 0.848 - transcription elongation factor B (SIII), polypeptide 1a, transcript variant X4
12. cyr61 ENSDARG00000023062 1213 1.659 0.843 - - - - - - - 0.816 cysteine-rich, angiogenic inducer, 61 [Source:ZFIN;Acc:ZDB-GENE-040426-3]
13. psmd8 ENSDARG00000020454 6645 1.657 - 0.843 - - - - - - 0.814 proteasome 26S subunit, non-ATPase 8 [Source:ZFIN;Acc:ZDB-GENE-040625-136]
14. psmb6 ENSDARG00000002240 8015 1.654 - 0.825 - - - - - 0.829 - proteasome subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216]
15. gpkow ENSDARG00000029612 1395 1.649 - - - - - - - 0.834 0.815 G patch domain and KOW motifs [Source:ZFIN;Acc:ZDB-GENE-030616-159]
16. CNOT4_1 CNOT4_1 697 1.649 0.814 - - - - - - - 0.835
17. psenen ENSDARG00000068698 2777 1.647 - - 0.801 - - - - 0.846 - presenilin enhancer, gamma-secretase subunit [Source:ZFIN;Acc:ZDB-GENE-040218-1]
18. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 1.646 - 0.832 - - - - - 0.814 - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
19. tpst1l ENSDARG00000044513 1339 1.637 0.786 - - - - - - - 0.851 tyrosylprotein sulfotransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-040316-1]
20. cog2 ENSDARG00000004037 462 1.633 - - 0.848 - - - - - 0.785 component of oligomeric golgi complex 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2671]
21. EPHA2 EPHA2 867 1.63 0.773 - - - - - - - 0.857
22. baxa ENSDARG00000020623, ENSDARG00000089129 2611 1.626 - 0.791 - - - - - - 0.835 BCL2 associated X, apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-000511-6]
23. PRSS23 ENSDARG00000055786 564 1.622 0.794 0.828 - - - - - - - serine protease 23 [Source:ZFIN;Acc:ZDB-GENE-030131-9149]
24. wwp2 ENSDARG00000061345 3459 1.621 0.782 0.839 - - - - - - - WW domain containing E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-000607-82]
25. gapvd1 ENSDARG00000090183, ENSDARG00000113177 611 1.62 - - - - - - - 0.852 0.768 GTPase activating protein and VPS9 domains 1 [Source:ZFIN;Acc:ZDB-GENE-040718-117]
26. lhfp 700 1.613 - 0.728 0.885 - - - - - - lipoma HMGIC fusion partner
27. seh1l ENSDARG00000004280 2915 1.611 - - 0.786 - - - - 0.825 - SEH1-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6689]
28. nuf2 ENSDARG00000034624 2252 1.609 - 0.810 - - - - - - 0.799 NUF2, NDC80 kinetochore complex component, homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1121]
29. pank4 ENSDARG00000098453, ENSDARG00000114951 662 1.609 - - - - - - 0.818 - 0.791 pantothenate kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1592]
30. tmem214 ENSDARG00000016968 3772 1.606 - - 0.825 - - - - - 0.781 transmembrane protein 214 [Source:ZFIN;Acc:ZDB-GENE-110307-2]
31. rasgef1ba ENSDARG00000033614, ENSDARG00000116057 4860 1.605 - - 0.752 - - - - 0.853 - RasGEF domain family, member 1Ba [Source:ZFIN;Acc:ZDB-GENE-030131-5783]
32. ppp1r14bb ENSDARG00000030161 2349 1.604 0.849 0.755 - - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14Bb [Source:ZFIN;Acc:ZDB-GENE-030616-595]
33. brf1a ENSDARG00000017835 206 1.604 0.776 - 0.828 - - - - - - BRF1, RNA polymerase III transcription initiation factor a [Source:ZFIN;Acc:ZDB-GENE-030131-6334]
34. SCARF2 1117 1.603 - - 0.873 - - - 0.730 - - scavenger receptor class F, member 2
35. hoxc11a ENSDARG00000070351 1783 1.601 - - 0.832 - - 0.769 - - - homeobox C11a [Source:ZFIN;Acc:ZDB-GENE-990415-111]
36. psat1 ENSDARG00000016733 8084 1.6 - 0.837 0.763 - - - - - - phosphoserine aminotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5723]
37. Mar-02 Mar-02 1812 1.6 - - 0.778 - - - - - 0.822
38. endog ENSDARG00000058865 679 1.598 - 0.779 - - - - - - 0.819 endonuclease G [Source:ZFIN;Acc:ZDB-GENE-050522-402]
39. zgc:174906 ENSDARG00000075314 2187 1.598 - - - - - - - 0.835 0.763 zgc:174906 [Source:ZFIN;Acc:ZDB-GENE-030131-6125]
40. pdlim4 ENSDARG00000068973 2567 1.594 - - - - - - - 0.823 0.771 PDZ and LIM domain 4 [Source:ZFIN;Acc:ZDB-GENE-070308-5]
41. CCDC167 ENSDARG00000045850 1024 1.593 - - 0.827 - - - - - 0.766 coiled-coil domain containing 167 [Source:ZFIN;Acc:ZDB-GENE-041210-79]
42. strada ENSDARG00000037929 1614 1.593 0.775 - 0.818 - - - - - - ste20-related kinase adaptor alpha [Source:ZFIN;Acc:ZDB-GENE-030131-6482]
43. mdm4 ENSDARG00000057513 1954 1.592 - 0.734 0.858 - - - - - - MDM4, p53 regulator [Source:ZFIN;Acc:ZDB-GENE-030131-6872]
44. mto1 ENSDARG00000055679 859 1.591 - 0.779 - - - - - - 0.812 mitochondrial tRNA translation optimization 1 [Source:ZFIN;Acc:ZDB-GENE-070209-253]
45. siah1 ENSDARG00000030871 1590 1.587 - 0.759 - - - - - 0.828 - siah E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-010319-31]
46. hccs hccs 1758 1.586 - - 0.803 - - - 0.783 - -
47. CR387996.1 ENSDARG00000097774 3037 1.585 0.819 - - - - - - - 0.766
48. MRPL18 ENSDARG00000060199, ENSDARG00000110565, ENSDARG00000112114 1364 1.584 0.707 0.877 - - - - - - - mitochondrial ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-061013-632]
49. cul5a ENSDARG00000069742, ENSDARG00000112542, ENSDARG00000116292 955 1.583 - 0.746 0.837 - - - - - - cullin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-5426]
50. slc20a1b ENSDARG00000010641 2564 1.582 0.785 - - - - - 0.797 - - solute carrier family 20 (phosphate transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-260]
51. etfdh ENSDARG00000038834 1811 1.579 0.776 - - - - - - - 0.803 electron transfer flavoprotein dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040912-168]
52. COL4A3BP COL4A3BP 3288 1.579 - 0.819 - - - 0.760 - - -
53. pho ENSDARG00000035133 670 1.578 0.757 - 0.821 - - - - - - phoenix [Source:ZFIN;Acc:ZDB-GENE-030131-5935]
54. lrig1 ENSDARG00000075625 2027 1.576 - 0.739 - - - - - 0.837 - leucine-rich repeats and immunoglobulin-like domains 1 [Source:ZFIN;Acc:ZDB-GENE-031113-23]
55. txnl4a ENSDARG00000036190 2048 1.574 - - - - - - 0.717 0.857 - thioredoxin-like 4A [Source:ZFIN;Acc:ZDB-GENE-041010-25]
56. piezo1 ENSDARG00000076870 4704 1.573 - 0.806 - - - - - - 0.767 piezo-type mechanosensitive ion channel component 1 [Source:ZFIN;Acc:ZDB-GENE-041111-255]
57. atp6ap2 ENSDARG00000008735 5096 1.573 - - - - - - - 0.830 0.743 ATPase H+ transporting accessory protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1960]
58. xpnpep1 ENSDARG00000029011 1723 1.571 0.752 - - - - - - - 0.819 X-prolyl aminopeptidase (aminopeptidase P) 1, soluble [Source:ZFIN;Acc:ZDB-GENE-040426-999]
59. lrrc24 ENSDARG00000101704 224 1.569 0.720 - - - - - - 0.849 - leucine rich repeat containing 24 [Source:ZFIN;Acc:ZDB-GENE-060503-496]
60. psd3l ENSDARG00000104820 1201 1.568 - - - - - - - 0.794 0.774 pleckstrin and Sec7 domain containing 3, like [Source:ZFIN;Acc:ZDB-GENE-030131-8195]
61. JMJD1C_1 JMJD1C_1 3094 1.563 0.802 - - - - - - - 0.761
62. SEC16A 1707 1.563 - - 0.768 - - - - - 0.795 SEC16 homolog A, endoplasmic reticulum export factor, transcript variant X3
63. timm17a ENSDARG00000029510, ENSDARG00000115486 4295 1.563 - - - - - - 0.749 0.814 - translocase of inner mitochondrial membrane 17 homolog A (yeast) [Source:ZFIN;Acc:ZDB-GENE-031030-6]
64. zfp36l2 ENSDARG00000021806, ENSDARG00000116819 2176 1.561 - 0.718 - - - - - - 0.843 zinc finger protein 36, C3H type-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5873]
65. sppl2 ENSDARG00000030448 1040 1.56 - 0.799 - - - - - 0.761 - signal peptide peptidase-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4265]
66. THOP1 ENSDARG00000013776 2717 1.555 0.728 - 0.827 - - - - - - thimet oligopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-040718-47]
67. ZNF70_2 ZNF70_2 1866 1.555 - 0.706 - - - - - 0.849 -
68. plod1a ENSDARG00000059746 3364 1.554 0.785 - - - - - - - 0.769 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3165]
69. lrrfip2 ENSDARG00000010400 2633 1.554 - 0.783 0.771 - - - - - - leucine rich repeat (in FLII) interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7781]
70. gpsm2 ENSDARG00000017311, ENSDARG00000113810 1001 1.551 - 0.745 - - - - - - 0.806 G protein signaling modulator 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1169]
71. immt ENSDARG00000102874 3435 1.546 - 0.831 - - - - - - 0.715 inner membrane protein, mitochondrial (mitofilin) [Source:ZFIN;Acc:ZDB-GENE-030131-5417]
72. gnb4b ENSDARG00000115383 7457 1.544 - 0.707 - - - - - - 0.837 guanine nucleotide binding protein (G protein), beta polypeptide 4b [Source:ZFIN;Acc:ZDB-GENE-041114-167]
73. vsig10 ENSDARG00000058605, ENSDARG00000111389 361 1.544 - 0.706 0.838 - - - - - - V-set and immunoglobulin domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030131-7476]
74. cyb5r1 ENSDARG00000018966, ENSDARG00000112062 1017 1.54 0.768 - - - - 0.772 - - - cytochrome b5 reductase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8497]
75. gnb2 ENSDARG00000035357, ENSDARG00000105310 1523 1.54 - - - - - - 0.743 - 0.797 guanine nucleotide binding protein (G protein), beta polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-050320-65]
76. aurkaip1 ENSDARG00000074985 2214 1.539 - 0.806 0.733 - - - - - - aurora kinase A interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-070928-24]
77. map3k7 ENSDARG00000020469 2845 1.537 - 0.748 0.789 - - - - - - mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
78. si:ch73-138e16.8 175 1.535 - 0.728 - - - - - - 0.807 si:ch73-138e16.8
79. EPT1 EPT1 1912 1.532 - 0.805 - - - - - - 0.727
80. pi15a ENSDARG00000045378 2361 1.53 - - - - - - - 0.819 0.711 peptidase inhibitor 15a [Source:ZFIN;Acc:ZDB-GENE-040724-135]
81. ppp1r7 ENSDARG00000009740 2606 1.528 - 0.734 - - - - - 0.794 - protein phosphatase 1, regulatory (inhibitor) subunit 7 [Source:ZFIN;Acc:ZDB-GENE-051113-288]
82. smim7 ENSDARG00000074848 1260 1.523 - 0.721 0.802 - - - - - - small integral membrane protein 7 [Source:ZFIN;Acc:ZDB-GENE-060810-180]
83. lypd6b ENSDARG00000077643 650 1.522 - 0.750 - - - - - - 0.772 LY6/PLAUR domain containing 6B [Source:ZFIN;Acc:ZDB-GENE-050522-38]
84. CABZ01084579.1 CABZ01084579.1 7181 1.521 - 0.805 - - - - - - 0.716
85. ndufs4 ENSDARG00000052840, ENSDARG00000110036 3441 1.52 - - - - - 0.755 - 0.765 - NADH:ubiquinone oxidoreductase subunit S4 [Source:ZFIN;Acc:ZDB-GENE-050522-421]
86. FOXK2 ENSDARG00000030583 5500 1.52 - 0.774 - - - - - - 0.746 forkhead box K2 [Source:ZFIN;Acc:ZDB-GENE-030131-2861]
87. pbdc1 ENSDARG00000057299, ENSDARG00000111256, ENSDARG00000112544 5960 1.52 - 0.718 - - - - - 0.802 - polysaccharide biosynthesis domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040718-459]
88. sorbs1 ENSDARG00000103435 2297 1.52 - - - - - 0.771 0.749 - - sorbin and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090313-168]
89. mid1ip1a ENSDARG00000041051 5425 1.516 - - - - - 0.758 - - 0.758 MID1 interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-990415-81]
90. GID4 ENSDARG00000079482 1375 1.514 - 0.737 0.777 - - - - - - GID complex subunit 4 homolog [Source:HGNC Symbol;Acc:HGNC:28453]
91. naa50 ENSDARG00000027825, ENSDARG00000116858 3221 1.513 0.799 - 0.714 - - - - - - N(alpha)-acetyltransferase 50, NatE catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040801-142]
92. sec22a ENSDARG00000078328 1207 1.513 - 0.743 - - - 0.770 - - - SEC22 homolog A, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-030131-3553]
93. bcat2 ENSDARG00000054849 4317 1.51 0.733 - - - - - 0.777 - - branched chain amino-acid transaminase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040718-425]
94. otud5b ENSDARG00000056840, ENSDARG00000114052 2199 1.504 - - 0.775 - - - - - 0.729 OTU deubiquitinase 5b [Source:ZFIN;Acc:ZDB-GENE-040801-50]
95. slka ENSDARG00000061525 1678 1.5 0.710 - - - - - - - 0.790 STE20-like kinase a [Source:ZFIN;Acc:ZDB-GENE-050411-66]
96. thbs1b ENSDARG00000010785 3095 1.497 0.748 - - - - 0.749 - - - thrombospondin 1b [Source:ZFIN;Acc:ZDB-GENE-020708-1]
97. rsrc2 ENSDARG00000042534 1756 1.496 0.768 0.728 - - - - - - - arginine/serine-rich coiled-coil 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2457]
98. OTTDARG00000032278 OTTDARG00000032278 1016 1.495 0.758 0.737 - - - - - - -
99. vrk1 ENSDARG00000018006 1759 1.495 0.731 - - - - - - 0.764 - vaccinia related kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2709]
100. CABZ01028296.1 CABZ01028296.1 6203 1.494 - - 0.775 - - - 0.719 - -

There are 1619 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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