Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lmnl3

Gene Name Gene ID Reads Annotation
lmnl3 ENSDARG00000007751 158 lamin L3 [Source:ZFIN;Acc:ZDB-GENE-020424-4]










Genes with expression patterns similar to lmnl3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lmnl3 ENSDARG00000007751 158 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 lamin L3 [Source:ZFIN;Acc:ZDB-GENE-020424-4]
2. trim24 ENSDARG00000103350 431 2.374 0.757 - - - - 0.914 - - 0.703 tripartite motif containing 24 [Source:ZFIN;Acc:ZDB-GENE-030131-5913]
3. tcf19l ENSDARG00000040036 369 1.678 0.854 - - - - - 0.824 - - transcription factor 19 (SC1), like [Source:ZFIN;Acc:ZDB-GENE-060324-2]
4. CU984580.1 CU984580.1 141 1.664 - 0.759 - - - - 0.905 - -
5. fgf12b ENSDARG00000113525 261 1.649 0.726 - - - - - 0.923 - - fibroblast growth factor 12b [Source:ZFIN;Acc:ZDB-GENE-060825-134]
6. CABZ01045230.1 CABZ01045230.1 158 1.646 - - - - - 0.927 - - 0.719
7. chic2 ENSDARG00000022690 184 1.605 0.809 0.796 - - - - - - - cysteine-rich hydrophobic domain 2 [Source:ZFIN;Acc:ZDB-GENE-040426-778]
8. eno1b ENSDARG00000013750 63 1.592 - - - - - 0.833 - - 0.759 enolase 1b, (alpha) [Source:ZFIN;Acc:ZDB-GENE-040426-1651]
9. adcyap1a ENSDARG00000004015 67 1.586 0.702 - - - - 0.884 - - - adenylate cyclase activating polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-020809-4]
10. cep44 ENSDARG00000053106 683 1.565 - - - - - 0.796 0.769 - - centrosomal protein 44 [Source:ZFIN;Acc:ZDB-GENE-060929-392]
11. antxr1a ENSDARG00000025672 32 1.553 - - - - - 0.834 0.719 - - ANTXR cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-110411-15]
12. SLC5A6 SLC5A6 179 1.551 - - - - - 0.824 0.727 - -
13. kdm2bb ENSDARG00000046010 747 1.532 - 0.749 - - - 0.783 - - - lysine (K)-specific demethylase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080225-13]
14. si:dkey-51d8.9 ENSDARG00000096217 47 1.528 - - - - - 0.823 - 0.705 - si:dkey-51d8.9 [Source:ZFIN;Acc:ZDB-GENE-110914-66]
15. wacb ENSDARG00000099015 146 1.495 0.767 - - - - 0.728 - - - WW domain containing adaptor with coiled-coil b [Source:ZFIN;Acc:ZDB-GENE-041010-46]
16. cyp26a1 ENSDARG00000033999 1136 1.463 - 0.756 - - - - - - 0.707 cytochrome P450, family 26, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-990415-44]
17. ehmt2 ENSDARG00000102325 984 1.449 0.709 - - - - 0.740 - - - euchromatic histone-lysine N-methyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-010501-6]
18. BX004964.3 BX004964.3 87 1.445 0.730 - - - - - 0.715 - -
19. cldn11a ENSDARG00000020031 284 1.425 - - - - - - 0.719 - 0.706 claudin 11a [Source:ZFIN;Acc:ZDB-GENE-040718-369]
20. si:dkey-19a16.7 ENSDARG00000071644 460 1.423 - - - - - - 0.719 - 0.704 si:dkey-19a16.7 [Source:ZFIN;Acc:ZDB-GENE-060503-903]
21. nfkbil1 ENSDARG00000003157 78 0.962 - - - - - 0.962 - - - nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1 [Source:ZFIN;Acc:ZDB-GENE-040116-7]
22. stx11b.2 ENSDARG00000042231, ENSDARG00000110079 68 0.955 - - - - - 0.955 - - - syntaxin 11b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050417-148]
23. si:dkeyp-14d3.1 66 0.955 - - - - - 0.955 - - - si:dkeyp-14d3.1, transcript variant X4
24. UNC13C 119 0.955 - - - - - 0.955 - - - unc-13 homolog C (C. elegans)
25. nptx2a ENSDARG00000037794 127 0.95 - - - - - - 0.950 - - neuronal pentraxin 2a [Source:ZFIN;Acc:ZDB-GENE-060707-1]
26. mapre1a ENSDARG00000042927 164 0.948 - - - - - 0.948 - - - microtubule-associated protein, RP/EB family, member 1a [Source:ZFIN;Acc:ZDB-GENE-030131-6067]
27. tspan15 ENSDARG00000039455, ENSDARG00000110074, ENSDARG00000112969 76 0.945 - - - - - 0.945 - - - tetraspanin 15 [Source:ZFIN;Acc:ZDB-GENE-050417-295]
28. KDM5A ENSDARG00000104567 450 0.939 - - - - - 0.939 - - - lysine (K)-specific demethylase 5A [Source:ZFIN;Acc:ZDB-GENE-150114-1]
29. syt16 ENSDARG00000030761 322 0.931 - - - - - 0.931 - - - synaptotagmin XVI [Source:ZFIN;Acc:ZDB-GENE-090313-210]
30. pou5f3 ENSDARG00000044774 212 0.93 - - - - - 0.930 - - - POU domain, class 5, transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-980526-485]
31. si:dkey-225k4.1 ENSDARG00000092045 47 0.93 - - - - - 0.930 - - - si:dkey-225k4.1 [Source:ZFIN;Acc:ZDB-GENE-091204-219]
32. ascc2 ENSDARG00000013058 228 0.93 - - - - - - 0.930 - - activating signal cointegrator 1 complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1223]
33. PFKL PFKL 9 0.929 - - - - - 0.929 - - -
34. ZNF414 ENSDARG00000079229 846 0.929 0.929 - - - - - - - - zinc finger protein 414 [Source:ZFIN;Acc:ZDB-GENE-070912-571]
35. camk2b1 ENSDARG00000011065 79 0.927 - - - - - 0.927 - - - calcium/calmodulin-dependent protein kinase (CaM kinase) II beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9588]
36. traf3ip1 ENSDARG00000010300 69 0.927 - - - - - 0.927 - - - TNF receptor-associated factor 3 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1146]
37. meiob 75 0.925 - - - - - 0.925 - - - meiosis specific with OB domains
38. ankrd55 ENSDARG00000099182 50 0.924 - - - - - - 0.924 - - ankyrin repeat domain 55 [Source:ZFIN;Acc:ZDB-GENE-080104-7]
39. MIER3 MIER3 114 0.923 - - - - - - 0.923 - -
40. fibinb ENSDARG00000087196, ENSDARG00000110737 53 0.922 - - - - - 0.922 - - - fin bud initiation factor b [Source:ZFIN;Acc:ZDB-GENE-050417-423]
41. zgc:173709 86 0.92 - - - - - 0.920 - - - zgc:173709
42. slc35e4 ENSDARG00000009459, ENSDARG00000109666 114 0.918 - - - - - 0.918 - - - solute carrier family 35, member E4 [Source:ZFIN;Acc:ZDB-GENE-050417-407]
43. sptssb ENSDARG00000091658 42 0.917 - - - - - 0.917 - - - serine palmitoyltransferase, small subunit B [Source:ZFIN;Acc:ZDB-GENE-060421-6887]
44. TEAD1 TEAD1 43 0.916 - - - - - 0.916 - - -
45. zgc:174178 zgc:174178 104 0.914 - - - - - 0.914 - - -
46. adcy8 ENSDARG00000031783 29 0.914 - - - - - 0.914 - - - adenylate cyclase 8 (brain) [Source:ZFIN;Acc:ZDB-GENE-070912-197]
47. si:dkey-10g2.5 si:dkey-10g2.5 72 0.913 - - - - - 0.913 - - -
48. ptgis ENSDARG00000060094, ENSDARG00000113227 82 0.912 - - - - - 0.912 - - - prostaglandin I2 (prostacyclin) synthase [Source:ZFIN;Acc:ZDB-GENE-070116-1]
49. tnxb 30 0.909 - - - - - 0.909 - - - tenascin XB
50. kat6a ENSDARG00000018907 250 0.909 - - - - - 0.909 - - - K(lysine) acetyltransferase 6A [Source:ZFIN;Acc:ZDB-GENE-021022-3]
51. zgc:162344 ENSDARG00000070040 126 0.909 - - - - - 0.909 - - - zgc:162344 [Source:ZFIN;Acc:ZDB-GENE-030131-6058]
52. zgc:153738 ENSDARG00000069230 84 0.908 - - - - - 0.908 - - - zgc:153738 [Source:ZFIN;Acc:ZDB-GENE-061013-622]
53. tbr1a ENSDARG00000076259 341 0.907 - - - - - 0.907 - - - T-box, brain, 1a [Source:ZFIN;Acc:ZDB-GENE-060810-93]
54. ZNF208 ZNF208 121 0.906 - - - - - - 0.906 - -
55. CU104700.1 CU104700.1 114 0.903 - - - - - 0.903 - - -
56. FHOD1 ENSDARG00000051768 43 0.902 - - - - - 0.902 - - - formin homology 2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-110623-4]
57. MAP7_1 MAP7_1 42 0.902 - - - - - 0.902 - - -
58. dennd6b ENSDARG00000011605 412 0.901 - - - - - 0.901 - - - DENN/MADD domain containing 6B [Source:ZFIN;Acc:ZDB-GENE-030131-9382]
59. ssr1 ENSDARG00000101627 151 0.895 - - - - - 0.895 - - - signal sequence receptor, alpha [Source:ZFIN;Acc:ZDB-GENE-030826-28]
60. CABZ01092722.1 CABZ01092722.1 2 0.895 - - - - - 0.895 - - -
61. sowahaa ENSDARG00000077861 3 0.895 - - - - - 0.895 - - - sosondowah ankyrin repeat domain family member Aa [Source:ZFIN;Acc:ZDB-GENE-100910-3]
62. pde6c ENSDARG00000100397 49 0.895 - - - - - 0.895 - - - phosphodiesterase 6C, cGMP-specific, cone, alpha prime [Source:ZFIN;Acc:ZDB-GENE-040426-1664]
63. exoc4 ENSDARG00000004336 32 0.895 - - - - - 0.895 - - - exocyst complex component 4 [Source:ZFIN;Acc:ZDB-GENE-041210-112]
64. SLC2A4RG SLC2A4RG 47 0.895 - - - - - 0.895 - - -
65. mxd ENSDARG00000023369 8 0.895 - - - - - 0.895 - - - myxovirus (influenza virus) resistance D [Source:ZFIN;Acc:ZDB-GENE-030721-8]
66. BX005085.3 ENSDARG00000103450 45 0.895 - - - - - 0.895 - - -
67. ush1c ENSDARG00000051876, ENSDARG00000112799 25 0.895 - - - - - 0.895 - - - Usher syndrome 1C [Source:ZFIN;Acc:ZDB-GENE-060312-41]
68. slc27a6 ENSDARG00000046053 57 0.895 - - - - - 0.895 - - - solute carrier family 27 (fatty acid transporter), member 6 [Source:ZFIN;Acc:ZDB-GENE-060825-27]
69. CR677591.1 CR677591.1 19 0.895 - - - - - 0.895 - - -
70. 5S_rRNA_23 5S_rRNA_23 2 0.895 - - - - - 0.895 - - -
71. nkiras2_1 ENSDARG00000052594 31 0.895 - - - - - 0.895 - - - NFKB inhibitor interacting Ras-like 2 [Source:ZFIN;Acc:ZDB-GENE-040801-166]
72. pip5k1cb ENSDARG00000100313 3 0.895 - - - - - 0.895 - - - phosphatidylinositol-4-phosphate 5-kinase, type I, gamma b [Source:ZFIN;Acc:ZDB-GENE-110408-21]
73. prpf3_1 ENSDARG00000086425, ENSDARG00000116776 84 0.895 - - - - - 0.895 - - - PRP3 pre-mRNA processing factor 3 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040823-3]
74. si:rp71-1h20.5 ENSDARG00000098176 3 0.895 - - - - - 0.895 - - - si:rp71-1h20.5 [Source:ZFIN;Acc:ZDB-GENE-030131-7869]
75. si:dkey-279j5.1 ENSDARG00000101459 17 0.895 - - - - - 0.895 - - - si:dkey-279j5.1 [Source:ZFIN;Acc:ZDB-GENE-120703-27]
76. SLC22A7 SLC22A7 3 0.895 - - - - - 0.895 - - -
77. BX571881.1 BX571881.1 2 0.895 - - - - - 0.895 - - -
78. si:dkey-197d18.3 si:dkey-197d18.3 7 0.895 - - - - - 0.895 - - -
79. prdm2a ENSDARG00000090721 11 0.895 - - - - - 0.895 - - - PR domain containing 2, with ZNF domain a [Source:ZFIN;Acc:ZDB-GENE-081104-139]
80. si:ch211-215m21.11 si:ch211-215m21.11 2 0.895 - - - - - 0.895 - - -
81. pde11al ENSDARG00000006151 70 0.895 - - - - - 0.895 - - - phosphodiesterase 11a, like [Source:ZFIN;Acc:ZDB-GENE-031118-106]
82. C11H1orf116 C11H1orf116 9 0.895 - - - - - 0.895 - - -
83. BX649415.1 BX649415.1 5 0.895 - - - - - 0.895 - - -
84. iffo1a ENSDARG00000062976 5 0.895 - - - - - 0.895 - - - intermediate filament family orphan 1a [Source:ZFIN;Acc:ZDB-GENE-060503-418]
85. abhd6b ENSDARG00000070894, ENSDARG00000111140 5 0.895 - - - - - 0.895 - - - abhydrolase domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-070410-104]
86. scospondin ENSDARG00000067859 4 0.895 - - - - - 0.895 - - - subcommissural organ spondin [Source:ZFIN;Acc:ZDB-GENE-051114-1]
87. CT583679.1 CT583679.1 11 0.895 - - - - - 0.895 - - -
88. itln3 ENSDARG00000003523 3 0.895 - - - - - 0.895 - - - intelectin 3 [Source:ZFIN;Acc:ZDB-GENE-090527-4]
89. BX004785.2 ENSDARG00000093487 10 0.895 - - - - - 0.895 - - -
90. trpc2 trpc2 10 0.895 - - - - - 0.895 - - -
91. neurod6b ENSDARG00000020794 164 0.895 - - - - - 0.895 - - - neuronal differentiation 6b [Source:ZFIN;Acc:ZDB-GENE-010608-2]
92. rpn2 ENSDARG00000009724 322 0.895 - - - - - 0.895 - - - ribophorin II [Source:ZFIN;Acc:ZDB-GENE-030131-7928]
93. SLC1A7 SLC1A7 3 0.895 - - - - - 0.895 - - -
94. zgc:174696 ENSDARG00000110658 67 0.895 - - - - - 0.895 - - - zgc:174696 [Source:ZFIN;Acc:ZDB-GENE-030131-2836]
95. PLEKHG3 72 0.895 - - - - - 0.895 - - - pleckstrin homology and RhoGEF domain containing G3, transcript variant X5
96. SDSL ENSDARG00000074698 34 0.895 - - - - - 0.895 - - - serine dehydratase-like [Source:ZFIN;Acc:ZDB-GENE-131121-410]
97. sybu ENSDARG00000060112 22 0.895 - - - - - 0.895 - - - syntabulin (syntaxin-interacting) [Source:ZFIN;Acc:ZDB-GENE-060929-1202]
98. CABZ01085657.1 CABZ01085657.1 23 0.895 - - - - - 0.895 - - -
99. si:dkey-9i23.6 ENSDARG00000094678 58 0.895 - - - - - 0.895 - - - si:dkey-9i23.6 [Source:ZFIN;Acc:ZDB-GENE-090313-365]
100. tmem196b ENSDARG00000090140 20 0.895 - - - - - 0.895 - - - transmembrane protein 196b [Source:ZFIN;Acc:ZDB-GENE-110914-248]

There are 1010 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA