Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lmnb2

Gene Name Gene ID Reads Annotation
lmnb2 ENSDARG00000101624 11304 lamin B2 [Source:ZFIN;Acc:ZDB-GENE-990630-13]










Genes with expression patterns similar to lmnb2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lmnb2 ENSDARG00000101624 11304 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 lamin B2 [Source:ZFIN;Acc:ZDB-GENE-990630-13]
2. uhrf1 ENSDARG00000103409 3282 3.063 - - - 0.795 - - 0.713 0.830 0.725 ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
3. uqcrfs1 ENSDARG00000007745 4654 2.573 0.888 0.908 - - - - 0.777 - - ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2060]
4. cenpe ENSDARG00000063385 4428 2.545 0.905 0.912 - - - - - - 0.728 centromere protein E [Source:ZFIN;Acc:ZDB-GENE-060929-860]
5. mapre1b ENSDARG00000002659 9119 2.529 - - 0.866 - 0.890 - - - 0.773 microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
6. cdkn2aipnl ENSDARG00000053395 5107 2.513 - - - 0.775 0.941 - 0.797 - - CDKN2A interacting protein N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041010-154]
7. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 2.497 - - - - 0.900 0.844 - 0.753 - structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
8. txnrd1 11401 2.46 0.880 - - 0.724 - - - - 0.856 thioredoxin reductase 1
9. wdr33 ENSDARG00000018272 4076 2.436 - - - - 0.925 - - 0.795 0.716 WD repeat domain 33 [Source:ZFIN;Acc:ZDB-GENE-040924-3]
10. npm1b ENSDARG00000037675 5448 2.418 - 0.912 - 0.718 0.788 - - - - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
11. gnb1b_1 ENSDARG00000104372 3728 2.417 - - 0.872 - - 0.815 0.730 - - guanine nucleotide binding protein (G protein), beta polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2855]
12. pafah1b3 ENSDARG00000058047, ENSDARG00000105336, ENSDARG00000116495 8019 2.412 - 0.915 0.759 - - 0.738 - - - platelet-activating factor acetylhydrolase, isoform Ib, gamma subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1026]
13. lsm4 ENSDARG00000023852 6083 2.409 0.826 - - - - 0.819 - - 0.764 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040426-1652]
14. hnrnpul1 ENSDARG00000040564 6550 2.397 - 0.917 - - - - - 0.732 0.748 heterogeneous nuclear ribonucleoprotein U-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2432]
15. ilf2 ENSDARG00000014591 14543 2.392 - - - 0.774 - - - 0.778 0.840 interleukin enhancer binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2345]
16. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 2.386 - - 0.882 - - - 0.733 - 0.771 structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
17. si:dkey-19e4.5 ENSDARG00000089886 2562 2.38 - - - 0.733 0.877 - - 0.770 - si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
18. ezh2 ENSDARG00000010571 3273 2.372 - - - 0.722 0.945 - - - 0.705 enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-041111-259]
19. vps29 ENSDARG00000069521 5599 2.368 - 0.864 0.745 - - 0.759 - - - vacuolar protein sorting 29 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-8764]
20. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 2.364 0.820 - - 0.744 - - - - 0.800 splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
21. srsf1a ENSDARG00000057691, ENSDARG00000111226 15525 2.362 - - - - 0.803 - - 0.768 0.791 serine/arginine-rich splicing factor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1950]
22. ube2e1 ENSDARG00000116649 10656 2.354 0.832 - - 0.737 - - 0.785 - - ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
23. stag2b ENSDARG00000053668, ENSDARG00000109728 7193 2.351 - - 0.886 0.726 - - - - 0.739 stromal antigen 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2785]
24. arpp19b ENSDARG00000039880 4823 2.335 - - - - 0.891 0.715 - - 0.729 cAMP-regulated phosphoprotein 19b [Source:ZFIN;Acc:ZDB-GENE-040426-930]
25. dnajc9 ENSDARG00000031293, ENSDARG00000111989 4082 2.277 - - - - - 0.788 0.722 - 0.767 DnaJ (Hsp40) homolog, subfamily C, member 9 [Source:ZFIN;Acc:ZDB-GENE-040718-130]
26. puf60b ENSDARG00000001241 13827 2.271 - - - 0.726 - 0.709 - - 0.836 poly-U binding splicing factor b [Source:ZFIN;Acc:ZDB-GENE-040625-116]
27. safb ENSDARG00000020467 5608 2.27 - - - - - - 0.770 0.730 0.770 scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
28. si:ch211-196l7.4 ENSDARG00000095451 3766 2.269 - - - - - 0.771 0.794 - 0.704 si:ch211-196l7.4 [Source:ZFIN;Acc:ZDB-GENE-050419-122]
29. tardbpl ENSDARG00000004452, ENSDARG00000116205 12160 2.243 0.764 - - 0.731 - 0.748 - - - TAR DNA binding protein, like [Source:ZFIN;Acc:ZDB-GENE-031030-1]
30. sf3b14 sf3b14 9434 2.217 - - - - 0.757 - - 0.744 0.716
31. tmpoa ENSDARG00000007315 3638 2.185 - - - 0.726 - 0.723 - 0.736 - thymopoietin a [Source:ZFIN;Acc:ZDB-GENE-030131-6003]
32. IWS1 2428 2.18 - - - - - 0.771 - 0.701 0.708 IWS1, SUPT6H interacting protein, transcript variant X2
33. C1H4orf27 C1H4orf27 1961 2.144 - - - - - 0.701 - 0.737 0.706
34. cnn3b ENSDARG00000029856 4807 1.837 - 0.912 - - 0.925 - - - - calponin 3, acidic b [Source:ZFIN;Acc:ZDB-GENE-050522-263]
35. itgb1bp1 ENSDARG00000007169 2723 1.834 - 0.974 0.860 - - - - - - integrin beta 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-051113-264]
36. scrt2 ENSDARG00000056175 4331 1.812 - - 0.880 - 0.932 - - - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
37. snrpb ENSDARG00000011125 11729 1.786 0.862 - - - 0.924 - - - - small nuclear ribonucleoprotein polypeptides B and B1 [Source:ZFIN;Acc:ZDB-GENE-040426-1819]
38. myo9al1 myo9al1 1194 1.773 - 0.915 - - 0.858 - - - -
39. ppp1cb ENSDARG00000044153 4748 1.771 - - - - 0.899 - 0.872 - - protein phosphatase 1, catalytic subunit, beta isozyme [Source:ZFIN;Acc:ZDB-GENE-030616-609]
40. bambia ENSDARG00000055381 2922 1.77 - 0.886 - - 0.884 - - - - BMP and activin membrane-bound inhibitor (Xenopus laevis) homolog a [Source:ZFIN;Acc:ZDB-GENE-010416-1]
41. si:dkey-87o1.2 ENSDARG00000095796 6602 1.751 - 0.897 - - - - 0.854 - - si:dkey-87o1.2 [Source:ZFIN;Acc:ZDB-GENE-110411-217]
42. FAM110D FAM110D 3632 1.742 - 0.980 - - - - 0.762 - -
43. fam192a ENSDARG00000041631 4113 1.742 0.830 0.912 - - - - - - - family with sequence similarity 192, member A [Source:ZFIN;Acc:ZDB-GENE-030131-6692]
44. myo1c myo1c 4978 1.742 - 0.943 - - - - 0.799 - -
45. calm2b 3890 1.738 - 0.915 - - - - 0.823 - - calmodulin 2b, (phosphorylase kinase, delta)
46. rab2a ENSDARG00000020261 24540 1.731 - - 0.814 - - - 0.917 - - RAB2A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-011212-2]
47. glyr1 ENSDARG00000099213 6906 1.731 - 0.916 - - - - 0.815 - - glyoxylate reductase 1 homolog (Arabidopsis) [Source:ZFIN;Acc:ZDB-GENE-041121-5]
48. NDUFA3 ENSDARG00000041400 7939 1.727 - 0.897 - - - - 0.830 - - NADH:ubiquinone oxidoreductase subunit A3 [Source:ZFIN;Acc:ZDB-GENE-040801-18]
49. ak2 ENSDARG00000005926 7598 1.725 - - - - 0.888 - 0.837 - - adenylate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-512]
50. eif2s3 ENSDARG00000008292 17051 1.725 - - 0.934 - 0.791 - - - - eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
51. gltscr2 gltscr2 5763 1.715 - 0.913 - - - - 0.802 - -
52. rbm8a ENSDARG00000016516 8789 1.715 0.751 0.964 - - - - - - - RNA binding motif protein 8A [Source:ZFIN;Acc:ZDB-GENE-050306-51]
53. MKI67 ENSDARG00000091150 11038 1.71 - - - - 0.878 - - - 0.832 marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
54. cox7a2a ENSDARG00000053217 12564 1.707 - 0.879 0.828 - - - - - - cytochrome c oxidase subunit 7A2a [Source:ZFIN;Acc:ZDB-GENE-050522-153]
55. tcea1 ENSDARG00000003531 2912 1.701 - - - - 0.902 - - 0.799 - transcription elongation factor A (SII), 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8049]
56. PRODH_1 PRODH_1 3400 1.701 - - - - 0.869 - 0.832 - -
57. BX511245.1 ENSDARG00000096871 7523 1.693 - 0.879 - - - - 0.814 - -
58. grb2b ENSDARG00000038059 9050 1.689 - 0.911 - - - 0.778 - - - growth factor receptor-bound protein 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1975]
59. dla ENSDARG00000010791 9281 1.681 - - - - 0.911 - - - 0.770 deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
60. srsf3b ENSDARG00000059360 14888 1.678 - - - - - - 0.878 - 0.800 serine/arginine-rich splicing factor 3b [Source:ZFIN;Acc:ZDB-GENE-071005-2]
61. slbp ENSDARG00000100558 3405 1.677 - - - - - 0.850 - 0.827 - stem-loop binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9686]
62. mboat2a ENSDARG00000031845 1255 1.672 0.824 - - - 0.848 - - - - membrane bound O-acyltransferase domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-041210-257]
63. nup98 ENSDARG00000074955 3998 1.669 - - - - 0.926 - - 0.743 - nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-1180]
64. foxo3b ENSDARG00000042904 5046 1.667 - - 0.850 - 0.817 - - - - forkhead box O3b [Source:ZFIN;Acc:ZDB-GENE-990708-6]
65. sf3b1 ENSDARG00000056138 5785 1.664 - 0.908 0.756 - - - - - - splicing factor 3b, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040827-3]
66. ythdc1 ENSDARG00000051953, ENSDARG00000114892 4752 1.663 - - - - 0.922 - - - 0.741 YTH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-114]
67. tra2a ENSDARG00000007863 4449 1.662 - 0.897 - - - 0.765 - - - transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]
68. mcm2 ENSDARG00000102798 8148 1.661 0.850 - - - - - - - 0.811 minichromosome maintenance complex component 2 [Source:ZFIN;Acc:ZDB-GENE-020419-24]
69. sde2 ENSDARG00000024124, ENSDARG00000109881 2342 1.659 - - 0.764 - 0.895 - - - - SDE2 telomere maintenance homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-050417-270]
70. creb1a ENSDARG00000053586 5068 1.656 - - 0.874 - - - - - 0.782 cAMP responsive element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-750]
71. mapk6 ENSDARG00000032103 6422 1.654 - - - - 0.884 0.770 - - - mitogen-activated protein kinase 6 [Source:ZFIN;Acc:ZDB-GENE-050420-7]
72. hnrpl 6412 1.653 0.809 - - - - - - - 0.844 heterogeneous nuclear ribonucleoprotein L, transcript variant X1
73. prpf40a ENSDARG00000058467 6565 1.652 - - - - 0.913 - - - 0.739 PRP40 pre-mRNA processing factor 40 homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-274]
74. dido1 ENSDARG00000057940 3819 1.652 - 0.916 - - - - - - 0.736 death inducer-obliterator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6117]
75. hoxc3a ENSDARG00000070339 3379 1.651 - 0.911 - - - - 0.740 - - homeobox C3a [Source:ZFIN;Acc:ZDB-GENE-980526-532]
76. frem3 ENSDARG00000074677, ENSDARG00000111196, ENSDARG00000114207 2326 1.647 - 0.918 - - - 0.729 - - - Fras1 related extracellular matrix 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9788]
77. ppp3r1a ENSDARG00000092659 9729 1.646 0.808 - - - - - 0.838 - - protein phosphatase 3, regulatory subunit B, alpha a [Source:ZFIN;Acc:ZDB-GENE-081113-3]
78. copz1 ENSDARG00000017844 7277 1.643 - 0.880 - - - - - - 0.763 coatomer protein complex, subunit zeta 1 [Source:ZFIN;Acc:ZDB-GENE-000406-6]
79. nova2 ENSDARG00000017673 7685 1.64 - - - - 0.921 - - - 0.719 neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
80. arl2 ENSDARG00000069496, ENSDARG00000112191 1389 1.639 - 0.912 - - - 0.727 - - - ADP-ribosylation factor-like 2 [Source:ZFIN;Acc:ZDB-GENE-041010-19]
81. cbx5 ENSDARG00000061187 24026 1.638 - 0.857 - - - 0.781 - - - chromobox homolog 5 (HP1 alpha homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5553]
82. atl3 ENSDARG00000004270 2806 1.636 - 0.895 - - - - 0.741 - - atlastin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-109]
83. akap12b ENSDARG00000055678, ENSDARG00000110544 8317 1.634 - - - - 0.857 - 0.777 - - A kinase (PRKA) anchor protein 12b [Source:ZFIN;Acc:ZDB-GENE-030131-9753]
84. ACTN4_1 ACTN4_1 8550 1.633 - - - - 0.760 - 0.873 - -
85. akirin2 ENSDARG00000058729 13245 1.633 - - - - - 0.840 - 0.793 - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
86. kif5ba ENSDARG00000074131, ENSDARG00000103394 5232 1.632 0.835 - - - - - 0.797 - - kinesin family member 5B, a [Source:ZFIN;Acc:ZDB-GENE-070629-2]
87. HNRNPA2B1 HNRNPA2B1 14997 1.63 - - 0.823 0.807 - - - - -
88. ncaph2 ENSDARG00000033757 1042 1.626 - - - - 0.901 - - 0.725 - non-SMC condensin II complex, subunit H2 [Source:ZFIN;Acc:ZDB-GENE-041210-172]
89. zgc:55733 ENSDARG00000103845 1550 1.625 0.845 - - - - - - 0.780 - zgc:55733 [Source:ZFIN;Acc:ZDB-GENE-040426-791]
90. slc43a1a ENSDARG00000037393, ENSDARG00000113118 5797 1.624 - 0.905 - - - - 0.719 - - solute carrier family 43 (amino acid system L transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-030131-6327]
91. col6a1 ENSDARG00000074908 2339 1.623 0.843 - - - - - 0.780 - - collagen, type VI, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-070501-6]
92. mbd1 mbd1 1309 1.621 - - - - 0.886 0.735 - - -
93. unc5b ENSDARG00000033327 3432 1.618 - - - - 0.899 - 0.719 - - unc-5 netrin receptor B [Source:ZFIN;Acc:ZDB-GENE-041213-1]
94. lsm7 ENSDARG00000058328 7191 1.618 - - - - - - 0.891 - 0.727 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-030131-8284]
95. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 1.618 - - - - - - 0.853 - 0.765 serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
96. smarca5 ENSDARG00000052348 15433 1.617 0.806 - - - - - - - 0.811 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
97. lsm1 ENSDARG00000043177 767 1.616 - 0.908 - - - 0.708 - - - LSM1, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-040801-68]
98. ube2i ube2i 13024 1.615 0.867 - - 0.748 - - - - -
99. mbd3a ENSDARG00000061774 4047 1.612 - - - - - 0.892 - - 0.720 methyl-CpG binding domain protein 3a [Source:ZFIN;Acc:ZDB-GENE-030131-9077]
100. cnksr1 ENSDARG00000032932, ENSDARG00000109531 2272 1.611 0.843 - - - - - 0.768 - - connector enhancer of kinase suppressor of Ras 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1802]

There are 1553 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA