Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for lmnb1

Gene Name Gene ID Reads Annotation
lmnb1 ENSDARG00000044299 9817 lamin B1 [Source:ZFIN;Acc:ZDB-GENE-020424-2]










Genes with expression patterns similar to lmnb1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lmnb1 ENSDARG00000044299 9817 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 lamin B1 [Source:ZFIN;Acc:ZDB-GENE-020424-2]
2. ncoa4 ENSDARG00000021439 4581 3.443 - - 0.757 0.964 - - 0.768 - 0.954 nuclear receptor coactivator 4 [Source:ZFIN;Acc:ZDB-GENE-040426-689]
3. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 3.251 - 0.869 - - 0.762 0.749 0.871 - - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
4. nusap1 ENSDARG00000002403 6953 3.153 - 0.755 0.738 - - - 0.762 - 0.898 nucleolar and spindle associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030827-5]
5. tdg tdg 3269 2.924 - - - - 0.764 0.702 0.748 0.710 -
6. mllt10 ENSDARG00000045401 7557 2.676 - - - 0.977 - - 0.787 - 0.912 MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:ZFIN;Acc:ZDB-GENE-041114-176]
7. lsm7 ENSDARG00000058328 7191 2.614 0.913 0.813 0.888 - - - - - - LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-030131-8284]
8. gpx4b ENSDARG00000076836 8085 2.6 - 0.928 - 0.949 - - 0.723 - - glutathione peroxidase 4b [Source:ZFIN;Acc:ZDB-GENE-030410-3]
9. caprin1b ENSDARG00000054272 7033 2.571 - 0.933 - - - 0.781 0.857 - - cell cycle associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2020]
10. cand1 ENSDARG00000017841 8164 2.554 - - 0.835 - - 0.756 - - 0.963 cullin-associated and neddylation-dissociated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2872]
11. rpl13a ENSDARG00000044093, ENSDARG00000116541 10473 2.54 - 0.864 - 0.959 - - 0.717 - - ribosomal protein L13a [Source:ZFIN;Acc:ZDB-GENE-030131-168]
12. dkc1 ENSDARG00000016484 7088 2.538 - 0.905 - - 0.818 - 0.815 - - dyskeratosis congenita 1, dyskerin [Source:ZFIN;Acc:ZDB-GENE-031118-120]
13. hp1bp3 ENSDARG00000044669 23708 2.534 - - - 0.952 - 0.701 - - 0.881 heterochromatin protein 1, binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-060810-79]
14. sltm ENSDARG00000052728 6234 2.505 0.883 - 0.838 - - - 0.784 - - SAFB-like, transcription modulator [Source:ZFIN;Acc:ZDB-GENE-040426-2647]
15. nop10 ENSDARG00000104227 2463 2.467 0.819 - - - 0.787 - 0.861 - - NOP10 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-041007-4]
16. cnn3b ENSDARG00000029856 4807 2.46 - - - - 0.721 0.757 - - 0.982 calponin 3, acidic b [Source:ZFIN;Acc:ZDB-GENE-050522-263]
17. polr2d ENSDARG00000076509 3386 2.438 0.763 - 0.813 - - - 0.862 - - polymerase (RNA) II (DNA directed) polypeptide D [Source:ZFIN;Acc:ZDB-GENE-040714-2]
18. pafah1b3 ENSDARG00000058047, ENSDARG00000105336, ENSDARG00000116495 8019 2.428 - - - - - 0.720 0.749 - 0.959 platelet-activating factor acetylhydrolase, isoform Ib, gamma subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1026]
19. sdc4 ENSDARG00000059906 10105 2.384 - - 0.819 - 0.758 - 0.807 - - syndecan 4 [Source:ZFIN;Acc:ZDB-GENE-061111-1]
20. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 2.383 0.782 - 0.831 - - - 0.770 - - PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
21. ppp2r2d ENSDARG00000102009 5710 2.358 - - 0.809 - - 0.744 0.805 - - protein phosphatase 2, regulatory subunit B, delta [Source:ZFIN;Acc:ZDB-GENE-040426-2086]
22. ddx39ab ENSDARG00000015111 11619 2.346 - - 0.866 - - 0.755 0.725 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
23. CABZ01092303.1 CABZ01092303.1 8825 2.339 0.734 0.878 - - - - 0.727 - -
24. sri ENSDARG00000058593 13152 2.315 - 0.762 - - 0.712 - - - 0.841 sorcin [Source:ZFIN;Acc:ZDB-GENE-040426-1356]
25. lypla2 ENSDARG00000053656 8971 2.309 0.705 - 0.825 - - - 0.779 - - lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
26. pbx2 ENSDARG00000019717 6892 2.262 - - 0.745 - 0.731 - 0.786 - - pre-B-cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-000405-5]
27. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 2.242 - - 0.723 - - - 0.787 0.732 - EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
28. setd8a 2549 2.239 - - 0.770 - 0.704 - 0.765 - - SET domain containing (lysine methyltransferase) 8a
29. smarce1 ENSDARG00000016871 9628 2.231 - - - - 0.752 - 0.733 0.746 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
30. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 2.225 - 0.762 0.758 - 0.705 - - - - pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
31. h2afvb ENSDARG00000116491 35692 2.211 - - - - - 0.787 - 0.711 0.713 H2A histone family, member Vb [Source:ZFIN;Acc:ZDB-GENE-050506-24]
32. si:ch211-161h7.4 ENSDARG00000087238 4399 2.208 - - 0.763 - 0.745 0.700 - - - si:ch211-161h7.4 [Source:ZFIN;Acc:ZDB-GENE-091118-108]
33. ssbp4 ENSDARG00000056483 10196 2.204 - - 0.735 - - - 0.714 0.755 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
34. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 1.933 - - - 0.966 - - - - 0.967 zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
35. hmgb2b ENSDARG00000053990 11519 1.81 - - - 0.967 - - 0.843 - - high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]
36. clasrp ENSDARG00000061742, ENSDARG00000116329 1650 1.797 - - - - - - 0.839 - 0.958 CLK4-associating serine/arginine rich protein [Source:ZFIN;Acc:ZDB-GENE-060503-837]
37. Sep-02 Sep-02 10074 1.782 - 0.902 - - - - 0.880 - -
38. etf1 etf1 12861 1.775 - - 0.813 - - - - - 0.962
39. stmn1a ENSDARG00000004169 21169 1.773 - - - 0.972 - - 0.801 - - stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
40. elavl1 11672 1.769 - - - 0.948 - 0.821 - - - ELAV like RNA binding protein 1, transcript variant X3
41. mycla ENSDARG00000006003 1866 1.767 - - - - - 0.805 - - 0.962 MYCL proto-oncogene, bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-040426-2439]
42. si:ch73-110p20.1 5932 1.767 - - 0.797 0.970 - - - - - si:ch73-110p20.1
43. prmt1 ENSDARG00000010246 11311 1.764 - - - 0.913 - - 0.851 - - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
44. hcfc1b ENSDARG00000012519 3633 1.764 - - - - - - 0.794 - 0.970 host cell factor C1b [Source:ZFIN;Acc:ZDB-GENE-030131-2411]
45. tarbp2 ENSDARG00000070471 1946 1.747 - 0.789 - - - - - - 0.958 TAR (HIV) RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8085]
46. dla ENSDARG00000010791 9281 1.746 - - - 0.962 0.784 - - - - deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
47. ing4 ENSDARG00000030716 5908 1.74 0.777 - - - - - - - 0.963 inhibitor of growth family, member 4 [Source:ZFIN;Acc:ZDB-GENE-050522-47]
48. nucks1b ENSDARG00000012777 4468 1.734 - - - 0.974 - - 0.760 - - nuclear casein kinase and cyclin-dependent kinase substrate 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4544]
49. mapre1b ENSDARG00000002659 9119 1.729 - - - 0.958 0.771 - - - - microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
50. nin ENSDARG00000060298 1558 1.727 - - - 0.968 - - 0.759 - - ninein (GSK3B interacting protein) [Source:ZFIN;Acc:ZDB-GENE-070725-1]
51. ip6k2 ip6k2 3926 1.726 - - 0.768 0.958 - - - - -
52. napa napa 4444 1.72 - - - 0.959 - - 0.761 - -
53. snx12 ENSDARG00000019060 9563 1.72 - - 0.894 - - - 0.826 - - sorting nexin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-787]
54. CYHR1 ENSDARG00000061057 2625 1.719 - - - - - - 0.767 - 0.952 cysteine/histidine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-060929-720]
55. ARFGAP1 ENSDARG00000101616 2952 1.718 - - - 0.968 - - 0.750 - - ADP-ribosylation factor GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-041114-130]
56. papola ENSDARG00000009585 9567 1.716 - - - - - - 0.811 - 0.905 poly(A) polymerase alpha [Source:ZFIN;Acc:ZDB-GENE-030131-3507]
57. sdcbp2 ENSDARG00000012513, ENSDARG00000113289, ENSDARG00000115159 6359 1.716 - - - 0.959 - - 0.757 - - syndecan binding protein (syntenin) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3727]
58. meis2b ENSDARG00000077840 5166 1.716 0.828 - - - - - - - 0.888 Meis homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-000210-23]
59. grb2a ENSDARG00000105276, ENSDARG00000111933, ENSDARG00000115948 1477 1.711 - - - - - - 0.754 - 0.957 growth factor receptor-bound protein 2a [Source:ZFIN;Acc:ZDB-GENE-041121-1]
60. hadhb ENSDARG00000102055 9700 1.709 - - - 0.950 - - 0.759 - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-8550]
61. MAST2 ENSDARG00000074311, ENSDARG00000109372 1527 1.707 - - - - - 0.749 - - 0.958 microtubule associated serine/threonine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-050309-150]
62. hif1al ENSDARG00000100826 18627 1.703 - - - 0.962 - - 0.741 - - hypoxia inducible factor 1 subunit alpha, like [Source:ZFIN;Acc:ZDB-GENE-040426-1315]
63. ZNF337_25 ZNF337_25 1713 1.696 - - - - - - 0.736 - 0.960
64. nhp2 ENSDARG00000069422 9925 1.695 - 0.832 - - - - 0.863 - - NHP2 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-533]
65. itgav ENSDARG00000006314 4277 1.693 - 0.756 - - - - - - 0.937 integrin, alpha V [Source:ZFIN;Acc:ZDB-GENE-060616-382]
66. paip2b ENSDARG00000008706 4255 1.692 0.734 - - 0.958 - - - - - poly(A) binding protein interacting protein 2B [Source:ZFIN;Acc:ZDB-GENE-040426-1736]
67. psma4 ENSDARG00000045928 5112 1.69 0.862 0.828 - - - - - - - proteasome subunit alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1932]
68. abcc2 ENSDARG00000014031, ENSDARG00000116140 1158 1.69 - 0.730 - 0.960 - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1523]
69. prss35 ENSDARG00000100691, ENSDARG00000109353 2333 1.69 0.726 - - 0.964 - - - - - protease, serine, 35 [Source:ZFIN;Acc:ZDB-GENE-040704-55]
70. zgc:158409 zgc:158409 21963 1.686 0.732 - - - - - - - 0.954
71. meis3 ENSDARG00000002795 2509 1.683 - 0.728 - 0.955 - - - - - myeloid ecotropic viral integration site 3 [Source:ZFIN;Acc:ZDB-GENE-010406-2]
72. eif4e1c ENSDARG00000012274, ENSDARG00000116158 4768 1.681 - - - 0.956 - - 0.725 - - eukaryotic translation initiation factor 4E family member 1c [Source:ZFIN;Acc:ZDB-GENE-050417-398]
73. zfr ENSDARG00000027109, ENSDARG00000116459 4171 1.681 - - - - - - 0.716 - 0.965 zinc finger RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-378]
74. taf10 ENSDARG00000068641 3333 1.68 - - - 0.955 - 0.725 - - - TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-060526-334]
75. cd82a ENSDARG00000019098 6761 1.679 - - - - - 0.731 - - 0.948 CD82 molecule a [Source:ZFIN;Acc:ZDB-GENE-030131-2818]
76. spcs2 ENSDARG00000042823 10032 1.671 - - - - - 0.882 0.789 - - signal peptidase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050320-32]
77. tars ENSDARG00000013250, ENSDARG00000110996, ENSDARG00000113759 4599 1.671 - 0.866 0.805 - - - - - - threonyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-041010-218]
78. srsf11 ENSDARG00000098574 12801 1.669 - 0.846 - - - - 0.823 - - serine/arginine-rich splicing factor 11 [Source:ZFIN;Acc:ZDB-GENE-030131-605]
79. ube2v2 ENSDARG00000028198 23341 1.655 - 0.916 - - - - 0.739 - - ubiquitin-conjugating enzyme E2 variant 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2919]
80. derl1 ENSDARG00000021905 4698 1.654 - 0.795 - - - - 0.859 - - derlin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2793]
81. Sep-06 Sep-06 5465 1.653 0.794 - - - - - 0.859 - -
82. akirin2 ENSDARG00000058729 13245 1.651 0.803 - - - - - 0.848 - - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
83. znf346 ENSDARG00000060695 3942 1.65 - 0.859 - - - - 0.791 - - zinc finger protein 346 [Source:ZFIN;Acc:ZDB-GENE-070209-152]
84. brd3a ENSDARG00000006527 1636 1.649 0.824 - - - - - 0.825 - - bromodomain containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-6141]
85. hexim1 ENSDARG00000036482 4317 1.649 - - 0.839 - - - 0.810 - - hexamethylene bis-acetamide inducible 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4637]
86. otub1b ENSDARG00000011462 4329 1.649 - 0.812 - - - - 0.837 - - OTU deubiquitinase, ubiquitin aldehyde binding 1b [Source:ZFIN;Acc:ZDB-GENE-040718-204]
87. dut ENSDARG00000106529 3120 1.648 - - 0.864 - - - 0.784 - - deoxyuridine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-041010-93]
88. map3k7 ENSDARG00000020469 2845 1.648 0.800 - - - - - 0.848 - - mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
89. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 1.647 0.734 - - - - - 0.913 - - pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
90. anp32b ENSDARG00000023330 25013 1.646 - - - - - - 0.747 - 0.899 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-719]
91. h2afy2_1 ENSDARG00000087897 9887 1.644 0.797 - - - - - 0.847 - - H2A histone family, member Y2 [Source:ZFIN;Acc:ZDB-GENE-050913-114]
92. stip1 ENSDARG00000004906 7742 1.644 - 0.838 - - - - 0.806 - - stress-induced phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-041121-17]
93. gar1 ENSDARG00000076526, ENSDARG00000116188 3408 1.642 0.790 0.852 - - - - - - - GAR1 homolog, ribonucleoprotein [Source:ZFIN;Acc:ZDB-GENE-040426-893]
94. rerea ENSDARG00000077353 4162 1.638 0.836 - - - - - 0.802 - - arginine-glutamic acid dipeptide (RE) repeats a [Source:ZFIN;Acc:ZDB-GENE-060718-1]
95. anp32e ENSDARG00000054804 11017 1.635 - - 0.878 - - - 0.757 - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member E [Source:ZFIN;Acc:ZDB-GENE-040426-2448]
96. ktn1 ENSDARG00000032802 6251 1.635 0.785 0.850 - - - - - - - kinectin 1 [Source:ZFIN;Acc:ZDB-GENE-030408-4]
97. psma6a ENSDARG00000019398 2702 1.632 0.817 - - - - - 0.815 - - proteasome subunit alpha 6a [Source:ZFIN;Acc:ZDB-GENE-020326-1]
98. tmem50a ENSDARG00000015757 3244 1.631 - - 0.765 - - - 0.866 - - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
99. pa2g4b ENSDARG00000070657 7999 1.629 - - - - 0.784 - 0.845 - - proliferation-associated 2G4, b [Source:ZFIN;Acc:ZDB-GENE-030131-2182]
100. snrpb ENSDARG00000011125 11729 1.628 - - 0.804 - 0.824 - - - - small nuclear ribonucleoprotein polypeptides B and B1 [Source:ZFIN;Acc:ZDB-GENE-040426-1819]

There are 1751 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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