Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lmna

Gene Name Gene ID Reads Annotation
lmna ENSDARG00000013415 1562 lamin A [Source:ZFIN;Acc:ZDB-GENE-020424-3]










Genes with expression patterns similar to lmna

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lmna ENSDARG00000013415 1562 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 lamin A [Source:ZFIN;Acc:ZDB-GENE-020424-3]
2. efemp2a ENSDARG00000094324 39261 2.234 - - - 0.725 0.720 - - 0.789 - EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
3. rac2 ENSDARG00000038010 5837 1.794 - 0.876 0.918 - - - - - - Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
4. galnt1 ENSDARG00000061335 1648 1.793 - - 0.942 0.851 - - - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2360]
5. kif2c ENSDARG00000076228 2281 1.791 - 0.844 0.947 - - - - - - kinesin family member 2C [Source:ZFIN;Acc:ZDB-GENE-070912-298]
6. capn12 ENSDARG00000010758, ENSDARG00000116381 3116 1.767 - - 0.963 0.804 - - - - - calpain 12 [Source:ZFIN;Acc:ZDB-GENE-050419-245]
7. yipf5 ENSDARG00000007279 2334 1.695 - 0.762 0.933 - - - - - - Yip1 domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1057]
8. CABZ01074130.1 ENSDARG00000105274 26501 1.678 - - 0.945 0.733 - - - - -
9. GIT1 ENSDARG00000039489 1157 1.676 - 0.747 0.929 - - - - - - G protein-coupled receptor kinase interacting ArfGAP 1 [Source:ZFIN;Acc:ZDB-GENE-100408-5]
10. clic1 ENSDARG00000103340 2235 1.668 - 0.720 0.948 - - - - - - chloride intracellular channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3202]
11. ntd5 ENSDARG00000040944 4988 1.658 - - 0.948 0.710 - - - - - ntl-dependent gene 5 [Source:ZFIN;Acc:ZDB-GENE-031030-7]
12. BX571715.2 BX571715.2 1316 1.645 - - 0.929 - - - 0.716 - -
13. sema3fb ENSDARG00000055373 834 1.628 - - 0.928 - - - 0.700 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fb [Source:ZFIN;Acc:ZDB-GENE-050513-2]
14. naa40 ENSDARG00000024109, ENSDARG00000090570 4759 1.543 - 0.749 0.794 - - - - - - N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-105]
15. pltp ENSDARG00000104495 1037 1.538 - 0.827 - - 0.711 - - - - phospholipid transfer protein [Source:ZFIN;Acc:ZDB-GENE-040801-22]
16. dmrt2a ENSDARG00000015072, ENSDARG00000113160 895 1.535 - 0.802 - - 0.733 - - - - doublesex and mab-3 related transcription factor 2a [Source:ZFIN;Acc:ZDB-GENE-990621-7]
17. RPH3A_1 RPH3A_1 399 1.515 0.709 0.806 - - - - - - -
18. rab35 rab35 1287 1.503 0.713 - - - - - 0.790 - -
19. btr30 ENSDARG00000102591 506 1.486 0.707 0.779 - - - - - - - bloodthirsty-related gene family, member 30 [Source:ZFIN;Acc:ZDB-GENE-040426-1407]
20. zgc:110425 ENSDARG00000058479 5216 1.485 - - 0.767 - 0.718 - - - - zgc:110425 [Source:ZFIN;Acc:ZDB-GENE-050522-103]
21. cpm ENSDARG00000011769, ENSDARG00000113736 1113 1.485 0.723 - - - - - 0.762 - - carboxypeptidase M [Source:ZFIN;Acc:ZDB-GENE-041210-191]
22. dus4l ENSDARG00000006567 261 1.472 - 0.734 - - - - 0.738 - - dihydrouridine synthase 4-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040801-233]
23. hic1l ENSDARG00000045660 1489 1.47 0.717 0.753 - - - - - - - hypermethylated in cancer 1 like [Source:ZFIN;Acc:ZDB-GENE-030620-1]
24. btbd6a ENSDARG00000076440 748 1.469 - - - 0.723 - - - - 0.746 BTB (POZ) domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-080218-26]
25. ptgs2a ENSDARG00000004539 1207 1.465 - 0.753 - 0.712 - - - - - prostaglandin-endoperoxide synthase 2a [Source:ZFIN;Acc:ZDB-GENE-020530-2]
26. DNAH11 ENSDARG00000077384, ENSDARG00000094282 372 1.451 - - - 0.749 - - - 0.702 - dynein, axonemal, heavy chain 11 [Source:ZFIN;Acc:ZDB-GENE-100922-8]
27. si:ch211-42i9.4 si:ch211-42i9.4 1448 0.969 - - 0.969 - - - - - -
28. phgdh ENSDARG00000001873 8325 0.955 - - 0.955 - - - - - - phosphoglycerate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-647]
29. elovl7b ENSDARG00000100185 2032 0.954 - - 0.954 - - - - - - ELOVL fatty acid elongase 7b [Source:ZFIN;Acc:ZDB-GENE-030131-5485]
30. shc1 ENSDARG00000075437 3278 0.953 - - 0.953 - - - - - - SHC (Src homology 2 domain containing) transforming protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2538]
31. ndufaf2 ENSDARG00000069286, ENSDARG00000114828 1563 0.952 - - 0.952 - - - - - - NADH:ubiquinone oxidoreductase complex assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-040808-28]
32. cx30.3 ENSDARG00000042707, ENSDARG00000116331 2399 0.952 - - 0.952 - - - - - - connexin 30.3 [Source:ZFIN;Acc:ZDB-GENE-040406-1]
33. prpf4ba ENSDARG00000008784 936 0.951 - - 0.951 - - - - - - pre-mRNA processing factor 4Ba [Source:ZFIN;Acc:ZDB-GENE-040426-947]
34. laptm4a ENSDARG00000006397 1698 0.951 - 0.951 - - - - - - - lysosomal protein transmembrane 4 alpha [Source:ZFIN;Acc:ZDB-GENE-030131-1024]
35. yif1a ENSDARG00000019636 2215 0.951 - - 0.951 - - - - - - Yip1 interacting factor homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6922]
36. abcg2c ENSDARG00000058574 1261 0.951 - - 0.951 - - - - - - ATP-binding cassette, sub-family G (WHITE), member 2c [Source:ZFIN;Acc:ZDB-GENE-050517-37]
37. ppil2 ENSDARG00000002016, ENSDARG00000116167 914 0.949 - - 0.949 - - - - - - peptidylprolyl isomerase (cyclophilin)-like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1096]
38. twist3 ENSDARG00000019646 1221 0.949 - - 0.949 - - - - - - twist3 [Source:ZFIN;Acc:ZDB-GENE-000210-7]
39. si:ch211-250c4.3 si:ch211-250c4.3 677 0.945 - - 0.945 - - - - - -
40. smpd1 ENSDARG00000076121 584 0.944 - - 0.944 - - - - - - sphingomyelin phosphodiesterase 1, acid lysosomal [Source:ZFIN;Acc:ZDB-GENE-110411-222]
41. ZNHIT6 ENSDARG00000095817 355 0.944 - - 0.944 - - - - - - zinc finger HIT-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-110411-38]
42. zgc:56585 ENSDARG00000026236 704 0.943 - - 0.943 - - - - - - zgc:56585 [Source:ZFIN;Acc:ZDB-GENE-040426-1084]
43. LIMD1 LIMD1 1306 0.943 - - 0.943 - - - - - -
44. npdc1 npdc1 221 0.943 - - 0.943 - - - - - -
45. gli2a ENSDARG00000025641 2154 0.942 - - 0.942 - - - - - - GLI family zinc finger 2a [Source:ZFIN;Acc:ZDB-GENE-990706-8]
46. srp14 ENSDARG00000115987 3575 0.942 - - 0.942 - - - - - - signal recognition particle 14 [Source:ZFIN;Acc:ZDB-GENE-050913-131]
47. kdelr2a ENSDARG00000005254 13871 0.941 - - 0.941 - - - - - - KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2a [Source:ZFIN;Acc:ZDB-GENE-030826-32]
48. slc6a17 ENSDARG00000068787, ENSDARG00000109560 413 0.941 - - 0.941 - - - - - - solute carrier family 6 (neutral amino acid transporter), member 17 [Source:ZFIN;Acc:ZDB-GENE-030131-8187]
49. TMEM87A TMEM87A 2407 0.94 - - 0.940 - - - - - -
50. itsn1 ENSDARG00000000086 684 0.94 - - 0.940 - - - - - - intersectin 1 (SH3 domain protein) [Source:ZFIN;Acc:ZDB-GENE-030616-226]
51. pdia4 ENSDARG00000018491 1914 0.94 - - 0.940 - - - - - - protein disulfide isomerase family A, member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5493]
52. il17rd ENSDARG00000098359 1153 0.94 - - 0.940 - - - - - - interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]
53. tbc1d12a ENSDARG00000038237 698 0.939 - - 0.939 - - - - - - TBC1 domain family, member 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3920]
54. prdm1a ENSDARG00000002445 1340 0.939 - - 0.939 - - - - - - PR domain containing 1a, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-030131-2193]
55. ppp1r14c ENSDARG00000077341 1587 0.938 - - 0.938 - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
56. stk38a ENSDARG00000019973 1343 0.938 - - 0.938 - - - - - - serine/threonine kinase 38a [Source:ZFIN;Acc:ZDB-GENE-040426-2811]
57. tiprl ENSDARG00000032353 1045 0.938 - - 0.938 - - - - - - TIP41, TOR signaling pathway regulator-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1611]
58. tbc1d10a tbc1d10a 462 0.938 - - 0.938 - - - - - -
59. si:dkey-92i15.4 ENSDARG00000078387 428 0.938 - - 0.938 - - - - - - si:dkey-92i15.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8422]
60. tll1 ENSDARG00000037429, ENSDARG00000113847 1039 0.937 - - 0.937 - - - - - - tolloid-like 1 [Source:ZFIN;Acc:ZDB-GENE-041020-1]
61. ptges ENSDARG00000020136, ENSDARG00000115727 747 0.937 - - 0.937 - - - - - - prostaglandin E synthase [Source:ZFIN;Acc:ZDB-GENE-050407-2]
62. edc3 ENSDARG00000051931 780 0.937 - - 0.937 - - - - - - enhancer of mRNA decapping 3 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-287]
63. slc2a10 ENSDARG00000090820 637 0.937 - - 0.937 - - - - - - solute carrier family 2 (facilitated glucose transporter), member 10 [Source:ZFIN;Acc:ZDB-GENE-080204-6]
64. magoh ENSDARG00000038635, ENSDARG00000109837 2880 0.937 - - 0.937 - - - - - - mago homolog, exon junction complex subunit [Source:ZFIN;Acc:ZDB-GENE-041216-1]
65. wnt10a ENSDARG00000017155 491 0.937 - - 0.937 - - - - - - wingless-type MMTV integration site family, member 10a [Source:ZFIN;Acc:ZDB-GENE-990415-278]
66. hipk3b ENSDARG00000062082 1248 0.936 - - 0.936 - - - - - - homeodomain interacting protein kinase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-82]
67. lgals3l lgals3l 3833 0.936 - - 0.936 - - - - - -
68. yeats4 ENSDARG00000045874 1168 0.936 - - 0.936 - - - - - - YEATS domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-252]
69. dnajc3 dnajc3 802 0.936 - - 0.936 - - - - - -
70. ndufa4l2 153 0.935 - - 0.935 - - - - - - NDUFA4, mitochondrial complex associated like 2
71. si:ch211-173m16.2 ENSDARG00000093284 186 0.935 - - 0.935 - - - - - - si:ch211-173m16.2 [Source:ZFIN;Acc:ZDB-GENE-070912-155]
72. esf1 ENSDARG00000008740 1206 0.935 - - 0.935 - - - - - - ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4917]
73. si:dkey-220k22.3 ENSDARG00000094693 166 0.935 - - 0.935 - - - - - - si:dkey-220k22.3 [Source:ZFIN;Acc:ZDB-GENE-060526-257]
74. CR382281.1 ENSDARG00000100098 135 0.935 - - 0.935 - - - - - -
75. c1ql3a ENSDARG00000010350 179 0.935 - - 0.935 - - - - - - complement component 1, q subcomponent-like 3a [Source:ZFIN;Acc:ZDB-GENE-080417-1]
76. si:dkey-54g2.6 si:dkey-54g2.6 252 0.935 - - 0.935 - - - - - -
77. sptlc3 ENSDARG00000030743 596 0.935 - - 0.935 - - - - - - serine palmitoyltransferase, long chain base subunit 3 [Source:ZFIN;Acc:ZDB-GENE-041210-281]
78. mxra8b ENSDARG00000062129 1004 0.935 - - 0.935 - - - - - - matrix-remodelling associated 8b [Source:ZFIN;Acc:ZDB-GENE-061013-368]
79. CR855996.2 ENSDARG00000104450 310 0.934 - - 0.934 - - - - - - ATPase phospholipid transporting 8B5b [Source:NCBI gene;Acc:563450]
80. zgc:92360 ENSDARG00000038151 2161 0.934 - - 0.934 - - - - - - zgc:92360 [Source:ZFIN;Acc:ZDB-GENE-040718-470]
81. lpar1 ENSDARG00000099840 2010 0.934 - - 0.934 - - - - - - lysophosphatidic acid receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030616-499]
82. hdac4 ENSDARG00000098349 1370 0.934 - - 0.934 - - - - - - histone deacetylase 4 [Source:ZFIN;Acc:ZDB-GENE-061013-95]
83. mrps33 ENSDARG00000020015 3551 0.934 - - 0.934 - - - - - - mitochondrial ribosomal protein S33 [Source:ZFIN;Acc:ZDB-GENE-040715-6]
84. fndc3ba ENSDARG00000078179 2753 0.934 - - 0.934 - - - - - - fibronectin type III domain containing 3Ba [Source:ZFIN;Acc:ZDB-GENE-070510-1]
85. mapk12a ENSDARG00000042021 1573 0.933 - - 0.933 - - - - - - mitogen-activated protein kinase 12a [Source:ZFIN;Acc:ZDB-GENE-990415-257]
86. ralba ENSDARG00000040778 1574 0.933 - - 0.933 - - - - - - v-ral simian leukemia viral oncogene homolog Ba (ras related) [Source:ZFIN;Acc:ZDB-GENE-040801-267]
87. TMEM54 TMEM54 1882 0.932 - - 0.932 - - - - - -
88. tmbim1 tmbim1 1005 0.932 - - 0.932 - - - - - -
89. TIFA TIFA 1519 0.931 - - 0.931 - - - - - -
90. PTDSS2 ENSDARG00000101018 881 0.931 - - 0.931 - - - - - - phosphatidylserine synthase 2 [Source:ZFIN;Acc:ZDB-GENE-130424-2]
91. bcl2l10 ENSDARG00000026766 1426 0.931 - - 0.931 - - - - - - BCL2 like 10 [Source:ZFIN;Acc:ZDB-GENE-030825-2]
92. arpc5a ENSDARG00000039142 5482 0.931 - - 0.931 - - - - - - actin related protein 2/3 complex, subunit 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8448]
93. tmco4 ENSDARG00000078924 330 0.931 - - 0.931 - - - - - - transmembrane and coiled-coil domains 4 [Source:ZFIN;Acc:ZDB-GENE-041008-216]
94. C2CD2 ENSDARG00000105000 2573 0.93 - - 0.930 - - - - - - C2 calcium-dependent domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-110728-1]
95. FBXW7 ENSDARG00000060994 1675 0.93 - - 0.930 - - - - - - F-box and WD repeat domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-090313-79]
96. dctn3 ENSDARG00000041363 3351 0.929 - - 0.929 - - - - - - dynactin 3 (p22) [Source:ZFIN;Acc:ZDB-GENE-040704-65]
97. CABZ01008011.1 CABZ01008011.1 761 0.929 - - 0.929 - - - - - -
98. mbtps2 ENSDARG00000057577 1285 0.929 - - 0.929 - - - - - - membrane-bound transcription factor peptidase, site 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6598]
99. hint3 ENSDARG00000074286 1015 0.928 - - 0.928 - - - - - - histidine triad nucleotide binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-100922-168]
100. AIFM2 ENSDARG00000077549 1419 0.928 - - 0.928 - - - - - - apoptosis-inducing factor, mitochondrion-associated, 2 [Source:ZFIN;Acc:ZDB-GENE-050506-76]

There are 735 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA