Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lingo2

Gene Name Gene ID Reads Annotation
lingo2 lingo2 67










Genes with expression patterns similar to lingo2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lingo2 lingo2 67 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. SLC2A13 SLC2A13 74 2.583 - 0.987 - - - - 0.864 0.732 -
3. slc6a1a ENSDARG00000045944 260 2.458 - - - - 0.765 - 0.923 - 0.770 solute carrier family 6 (neurotransmitter transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-060519-23]
4. olig2 ENSDARG00000040946 1405 2.422 0.761 - - - - 0.767 0.894 - - oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
5. igsf9ba ENSDARG00000033845 158 2.412 - - - - - 0.802 0.893 0.717 - immunoglobulin superfamily, member 9Ba [Source:ZFIN;Acc:ZDB-GENE-060503-729]
6. her4.3 ENSDARG00000070770 613 2.392 - - - - - 0.771 0.874 0.747 - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
7. APBB3 ENSDARG00000053771 654 2.365 - 0.840 - - - 0.749 0.776 - - amyloid beta (A4) precursor protein-binding, family B, member 3 [Source:ZFIN;Acc:ZDB-GENE-140106-53]
8. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 2.356 - - - - - 0.803 0.799 0.754 - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
9. atoh7 ENSDARG00000069552 254 2.352 - - - - 0.706 - 0.932 - 0.714 atonal bHLH transcription factor 7 [Source:ZFIN;Acc:ZDB-GENE-000926-1]
10. ccdc6b ENSDARG00000017595 828 2.289 - 0.711 - - - 0.793 0.785 - - coiled-coil domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-040426-869]
11. nfatc1 ENSDARG00000036168 16 1.932 1.000 - - - - - 0.932 - - nuclear factor of activated T cells 1 [Source:ZFIN;Acc:ZDB-GENE-060503-677]
12. nudt13 ENSDARG00000057417, ENSDARG00000115835 46 1.932 1.000 - - - - - 0.932 - - nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
13. si:ch211-223a21.3 ENSDARG00000104737 28 1.908 - 0.976 - - - - 0.932 - - si:ch211-223a21.3 [Source:ZFIN;Acc:ZDB-GENE-110913-50]
14. xrra1 ENSDARG00000089578 18 1.867 - 0.935 - - - - 0.932 - - X-ray radiation resistance associated 1 [Source:ZFIN;Acc:ZDB-GENE-101216-2]
15. CAMK1 CAMK1 28 1.844 1.000 - - - 0.844 - - - -
16. CR932358.2 CR932358.2 15 1.833 1.000 0.833 - - - - - - -
17. NHSL1 NHSL1 182 1.831 1.000 - - - - 0.831 - - -
18. INSM2 ENSDARG00000020655 122 1.83 0.905 - - - - - 0.925 - - INSM transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:17539]
19. wu:fe38f03 wu:fe38f03 22 1.809 0.877 - - - - - 0.932 - -
20. si:ch211-26b3.4 ENSDARG00000075491 50 1.808 - - - - - 0.950 0.858 - - si:ch211-26b3.4 [Source:ZFIN;Acc:ZDB-GENE-081104-60]
21. cux2b ENSDARG00000086345 519 1.8 - 0.999 - - - 0.801 - - - cut-like homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-081104-176]
22. arhgap19 ENSDARG00000083189 210 1.784 - 0.914 - - - - 0.870 - - Rho GTPase activating protein 19 [Source:ZFIN;Acc:ZDB-GENE-100922-157]
23. b3galnt2 ENSDARG00000046133 68 1.783 0.880 - - - - - 0.903 - - beta-1,3-N-acetylgalactosaminyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-358]
24. RIBC2 ENSDARG00000075177 445 1.782 - 0.925 - - - - 0.857 - - RIB43A domain with coiled-coils 2 [Source:ZFIN;Acc:ZDB-GENE-050411-27]
25. dlgap3 ENSDARG00000055459 85 1.781 - - - - - 0.875 0.906 - - discs, large (Drosophila) homolog-associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-060503-413]
26. zeb1a ENSDARG00000016788 48 1.771 - 0.839 - - - - 0.932 - - zinc finger E-box binding homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-070912-124]
27. cdk5r2a ENSDARG00000071011 167 1.767 - - - - - 0.914 0.853 - - cyclin-dependent kinase 5, regulatory subunit 2a (p39) [Source:ZFIN;Acc:ZDB-GENE-050417-22]
28. cdk5r1a ENSDARG00000037916 46 1.765 1.000 - - - 0.765 - - - - cyclin-dependent kinase 5, regulatory subunit 1a (p35) [Source:ZFIN;Acc:ZDB-GENE-080723-17]
29. cnrip1b ENSDARG00000037337 39 1.748 - - - - - 0.816 0.932 - - cannabinoid receptor interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-080722-33]
30. prdm8 ENSDARG00000025017 370 1.747 - - - - - 0.842 0.905 - - PR domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2747]
31. mnx2a ENSDARG00000042106 939 1.746 - - - - - 0.875 0.871 - - motor neuron and pancreas homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-040415-1]
32. kif5c ENSDARG00000076027 424 1.744 - - - - - 0.864 0.880 - - kinesin family member 5C [Source:ZFIN;Acc:ZDB-GENE-081105-14]
33. CABZ01028287.1 CABZ01028287.1 626 1.744 - - - - - 0.868 0.876 - -
34. prdm1b ENSDARG00000098925 440 1.74 1.000 - - - 0.740 - - - - PR domain containing 1b, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-080618-2]
35. pcloa ENSDARG00000063299 353 1.737 - - - - - 0.894 0.843 - - piccolo presynaptic cytomatrix protein a [Source:ZFIN;Acc:ZDB-GENE-030131-8115]
36. CU929052.1 CU929052.1 642 1.731 1.000 - - - 0.731 - - - -
37. mir196b ENSDARG00000081346 35 1.724 1.000 - - - - - 0.724 - - microRNA 196b [Source:ZFIN;Acc:ZDB-MIRNAG-081212-1]
38. drd2a ENSDARG00000056926 40 1.723 - - - - - 0.791 0.932 - - dopamine receptor D2a [Source:ZFIN;Acc:ZDB-GENE-021119-2]
39. BX511121.1 ENSDARG00000029997 1774 1.72 - - - - - 0.898 0.822 - -
40. her8.2 ENSDARG00000069675 315 1.714 - 0.799 - - - - 0.915 - - hairy-related 8.2 [Source:ZFIN;Acc:ZDB-GENE-060815-4]
41. sst1.1 ENSDARG00000040799 677 1.713 - - - - - 0.757 0.956 - - somatostatin 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4743]
42. ascl1a ENSDARG00000038386 1290 1.708 - - - - - 0.805 0.903 - - achaete-scute family bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-980526-90]
43. CR538726.1 ENSDARG00000097179 321 1.703 - - - - - 0.832 0.871 - -
44. CABZ01080599.2 CABZ01080599.2 192 1.701 - - - - - 0.896 0.805 - -
45. abcg4a ENSDARG00000061047 56 1.696 - - - - - 0.762 0.934 - - ATP-binding cassette, sub-family G (WHITE), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-39]
46. SNORD14 SNORD14 31 1.689 - - - 0.757 - - 0.932 - -
47. mnx2b ENSDARG00000030350 484 1.688 - - - - - 0.880 0.808 - - motor neuron and pancreas homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-040415-2]
48. GADD45G GADD45G 382 1.686 - - - - - 0.832 0.854 - -
49. si:dkey-271j15.3 ENSDARG00000091627 88 1.685 - - - - - 0.753 0.932 - - si:dkey-271j15.3 [Source:ZFIN;Acc:ZDB-GENE-100921-27]
50. SSX2IP SSX2IP 316 1.683 - - - - - 0.856 0.827 - -
51. MAP4K2 ENSDARG00000001234 39 1.679 - 0.884 - - - - 0.795 - - mitogen-activated protein kinase kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030616-163]
52. SMARCAD1 SMARCAD1 104 1.679 - - - - - 0.762 0.917 - -
53. CABZ01029738.1 CABZ01029738.1 327 1.677 - - - - - 0.967 0.710 - -
54. pkib ENSDARG00000053110 527 1.674 - 0.914 - - - - 0.760 - - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:ZFIN;Acc:ZDB-GENE-041014-312]
55. SYT2 ENSDARG00000014169 265 1.67 - - - - - 0.822 0.848 - - synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
56. zgc:174696 ENSDARG00000110658 67 1.67 0.715 0.955 - - - - - - - zgc:174696 [Source:ZFIN;Acc:ZDB-GENE-030131-2836]
57. ccdc24 ENSDARG00000038793 7 1.669 - - - - - 0.737 0.932 - - coiled-coil domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-050327-18]
58. DLGAP2 DLGAP2 36 1.668 - - - - - 0.760 0.908 - -
59. HMGXB4 HMGXB4 209 1.667 - 0.912 - - - - 0.755 - -
60. ADAMTS3 ENSDARG00000060127 2839 1.667 - - - - - 0.815 0.852 - - ADAM metallopeptidase with thrombospondin type 1 motif, 3 [Source:ZFIN;Acc:ZDB-GENE-110223-1]
61. kcnj1b ENSDARG00000002666 87 1.664 - - - - - 0.725 0.939 - - potassium inwardly-rectifying channel, subfamily J, member 1b [Source:ZFIN;Acc:ZDB-GENE-070620-9]
62. nptnb ENSDARG00000043864 165 1.66 - - - - - 0.874 0.786 - - neuroplastin b [Source:ZFIN;Acc:ZDB-GENE-040426-1821]
63. faxcb ENSDARG00000078981 249 1.657 - - - - - 0.875 0.782 - - failed axon connections homolog b [Source:ZFIN;Acc:ZDB-GENE-100922-19]
64. C2CD4A ENSDARG00000061416 61 1.656 0.935 - - - - - 0.721 - - C2 calcium dependent domain containing 4A [Source:ZFIN;Acc:ZDB-GENE-030131-5712]
65. gpr98 gpr98 717 1.65 - - - - - 0.895 0.755 - -
66. WDR93 ENSDARG00000087191 51 1.649 - 0.916 - - - - 0.733 - - WD repeat domain 93 [Source:ZFIN;Acc:ZDB-GENE-161017-52]
67. CABZ01064671.1 ENSDARG00000039935 21 1.648 - - - - 0.716 - 0.932 - -
68. sv2c ENSDARG00000059997 592 1.638 - - - - - 0.727 0.911 - - synaptic vesicle glycoprotein 2C [Source:ZFIN;Acc:ZDB-GENE-060526-233]
69. fam184a ENSDARG00000014081 93 1.638 0.811 0.827 - - - - - - - family with sequence similarity 184, member A [Source:ZFIN;Acc:ZDB-GENE-041014-214]
70. her4.2 ENSDARG00000056729, ENSDARG00000094426 289 1.633 - - - - - 0.891 0.742 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
71. foxn4 ENSDARG00000010591 2332 1.629 - - - - - 0.814 0.815 - - forkhead box N4 [Source:ZFIN;Acc:ZDB-GENE-990415-277]
72. nes ENSDARG00000088805 2710 1.623 - - - - - 0.824 0.799 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
73. pdk3a ENSDARG00000014527 15 1.623 - 0.903 - - - - - - 0.720 pyruvate dehydrogenase kinase, isozyme 3a [Source:ZFIN;Acc:ZDB-GENE-061220-3]
74. TMEM55B_1 TMEM55B_1 495 1.622 - - - - - 0.704 0.918 - -
75. CABZ01021538.1 CABZ01021538.1 67 1.621 - - - - - 0.715 0.906 - -
76. nkx6.1 ENSDARG00000022569 3779 1.618 - - - - - 0.805 0.813 - - NK6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-178]
77. SLC5A7 SLC5A7 453 1.609 - - - - - 0.892 0.717 - -
78. gas7a ENSDARG00000074443, ENSDARG00000111294 250 1.608 - - - - - 0.833 - 0.775 - growth arrest-specific 7a [Source:ZFIN;Acc:ZDB-GENE-130128-1]
79. ENTHD1 ENTHD1 235 1.604 - - - - - 0.799 0.805 - -
80. zgc:158654 19 1.603 - - - - - - 0.886 - 0.717 zgc:158654, transcript variant X1
81. slc12a5b ENSDARG00000078187 329 1.601 0.797 - - - - - 0.804 - - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
82. cxxc4 ENSDARG00000077817 197 1.596 - - - - - - 0.885 - 0.711 CXXC finger 4 [Source:ZFIN;Acc:ZDB-GENE-090313-179]
83. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 1.592 - - - - - 0.726 0.866 - - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
84. chga ENSDARG00000008829 1086 1.588 - - - - - 0.822 0.766 - - chromogranin A [Source:ZFIN;Acc:ZDB-GENE-041010-161]
85. SHC3 ENSDARG00000098909 332 1.584 0.707 - - - - - 0.877 - - SHC adaptor protein 3 [Source:HGNC Symbol;Acc:HGNC:18181]
86. tmem240 tmem240 180 1.583 - - - - - 0.738 0.845 - -
87. zgc:100906 ENSDARG00000033599 344 1.58 - - - - - 0.811 0.769 - - zgc:100906 [Source:ZFIN;Acc:ZDB-GENE-040801-20]
88. pbx3a ENSDARG00000089262 97 1.58 - - - - - 0.782 0.798 - - pre-B-cell leukemia homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-031218-1]
89. sorcs3b ENSDARG00000077349 72 1.578 - - - - - 0.729 0.849 - - sortilin related VPS10 domain containing receptor 3b [Source:ZFIN;Acc:ZDB-GENE-131121-455]
90. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 1.576 - - - - 0.709 0.867 - - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
91. lgi1a ENSDARG00000020493 1218 1.576 - - - - - 0.725 0.851 - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
92. pkd2l1 ENSDARG00000022503 372 1.567 - - - - - 0.763 0.804 - - polycystic kidney disease 2-like 1 [Source:ZFIN;Acc:ZDB-GENE-030616-558]
93. sema3c ENSDARG00000034300 881 1.566 - - - - - 0.845 0.721 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C [Source:ZFIN;Acc:ZDB-GENE-050513-5]
94. lgi2b ENSDARG00000069701, ENSDARG00000116343 66 1.566 - - - - - 0.829 0.737 - - leucine-rich repeat LGI family, member 2b [Source:ZFIN;Acc:ZDB-GENE-060217-3]
95. zgc:162331 ENSDARG00000069607 13 1.56 - - - - - 0.816 0.744 - - zgc:162331 [Source:ZFIN;Acc:ZDB-GENE-070410-75]
96. wdr32 ENSDARG00000029600, ENSDARG00000110405 607 1.556 - - - - - 0.817 0.739 - - WD repeat domain 32 [Source:ZFIN;Acc:ZDB-GENE-040426-2314]
97. SLITRK5 SLITRK5 122 1.556 - - - - - 0.790 0.766 - -
98. sept5a ENSDARG00000013843 1206 1.554 - - - - - 0.782 0.772 - - septin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7868]
99. hmx1 ENSDARG00000095651, ENSDARG00000109725, ENSDARG00000111765 151 1.553 - - - - 0.761 - - - 0.792 H6 family homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-080204-54]
100. celf4 ENSDARG00000070045 1537 1.551 - - - - - - 0.795 0.756 - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]

There are 1576 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA