Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for lingo1b

Gene Name Gene ID Reads Annotation
lingo1b ENSDARG00000035899 86 leucine rich repeat and Ig domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040912-136]










Genes with expression patterns similar to lingo1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lingo1b ENSDARG00000035899 86 7 - 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 leucine rich repeat and Ig domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040912-136]
2. slc17a6a ENSDARG00000001127 337 2.524 - 1.000 - - - - - 0.788 0.736 solute carrier family 17 (vesicular glutamate transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-050105-4]
3. ttc9b ENSDARG00000068421 251 2.384 - 0.822 - - - - - 0.763 0.799 tetratricopeptide repeat domain 9B [Source:ZFIN;Acc:ZDB-GENE-050419-67]
4. pou3f2a ENSDARG00000070220 817 2.336 - - - - - 0.717 - 0.882 0.737 POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
5. lhx1a ENSDARG00000014018 958 2.314 - 0.903 - - - 0.708 - - 0.703 LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
6. st8sia1_1 ENSDARG00000098221 16 2 - 1.000 - - - 1.000 - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051005-1]
7. TMEM74 26 1.968 - 1.000 - - - 0.968 - - - transmembrane protein 74, transcript variant X3
8. FRMPD1 34 1.947 - 1.000 - - - 0.947 - - - FERM and PDZ domain containing 1, transcript variant X3
9. si:dkey-19f21.8 si:dkey-19f21.8 12 1.939 - 1.000 - - - 0.939 - - -
10. CU914780.1 ENSDARG00000114023 105 1.937 - 1.000 - - - 0.937 - - -
11. C18H15orf59 C18H15orf59 80 1.927 - 1.000 - - - 0.927 - - -
12. XRCC2 ENSDARG00000013933 15 1.908 - 1.000 - - 0.908 - - - - X-ray repair cross complementing 2 [Source:HGNC Symbol;Acc:HGNC:12829]
13. CR388095.2 ENSDARG00000117604 76 1.884 - 1.000 - - 0.884 - - - -
14. hoxc9a ENSDARG00000092809 18 1.851 - 1.000 - - - 0.851 - - - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
15. DKK3 DKK3 12 1.851 - 1.000 - - - 0.851 - - -
16. mfsd4a mfsd4a 179 1.851 - 1.000 - - - 0.851 - - -
17. RIMS1 RIMS1 9 1.851 - 1.000 - - - 0.851 - - -
18. si:dkey-97l20.5 si:dkey-97l20.5 33 1.851 - 1.000 - - - 0.851 - - -
19. gltpb ENSDARG00000077962 5 1.851 - 1.000 - - - 0.851 - - - glycolipid transfer protein b [Source:ZFIN;Acc:ZDB-GENE-091118-80]
20. rbfox3l rbfox3l 34 1.851 - 1.000 - - - 0.851 - - -
21. kcnk10b ENSDARG00000045956 43 1.809 - 1.000 - - - 0.809 - - - potassium channel, subfamily K, member 10b [Source:ZFIN;Acc:ZDB-GENE-050420-31]
22. si:ch211-42i9.5 si:ch211-42i9.5 21 1.803 - - - - - 1.000 - 0.803 -
23. otpb ENSDARG00000058379 1143 1.788 - 1.000 - - - 0.788 - - - orthopedia homeobox b [Source:ZFIN;Acc:ZDB-GENE-990708-7]
24. zgc:113210 ENSDARG00000002872 99 1.779 - 1.000 - - 0.779 - - - - zgc:113210 [Source:ZFIN;Acc:ZDB-GENE-050320-83]
25. penka ENSDARG00000004869 161 1.775 - 0.991 - - - 0.784 - - - proenkephalin a [Source:ZFIN;Acc:ZDB-GENE-030729-31]
26. fam219ab ENSDARG00000013813 591 1.775 - 1.000 - - - 0.775 - - - family with sequence similarity 219, member Ab [Source:ZFIN;Acc:ZDB-GENE-050522-213]
27. si:ch73-127m5.1 ENSDARG00000060680 253 1.763 - 1.000 - - - 0.763 - - - si:ch73-127m5.1 [Source:ZFIN;Acc:ZDB-GENE-130531-25]
28. GPC6_1 GPC6_1 34 1.757 - 1.000 - - - 0.757 - - -
29. mybl1 ENSDARG00000030999 158 1.75 - 1.000 - - - - - 0.750 - v-myb avian myeloblastosis viral oncogene homolog-like 1 [Source:ZFIN;Acc:ZDB-GENE-041111-281]
30. porcn ENSDARG00000052558, ENSDARG00000111556 110 1.748 - 1.000 - - 0.748 - - - - porcupine O-acyltransferase [Source:ZFIN;Acc:ZDB-GENE-081105-87]
31. chst1 ENSDARG00000088593, ENSDARG00000112011 102 1.743 - - - - - 0.968 - 0.775 - carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-21]
32. tecrl2 tecrl2 11 1.742 - 1.000 - - - 0.742 - - -
33. zbtb20 ENSDARG00000005586 195 1.74 - 1.000 - - - 0.740 - - - zinc finger and BTB domain containing 20 [Source:ZFIN;Acc:ZDB-GENE-070112-1992]
34. yjefn3 ENSDARG00000061692 211 1.724 - 1.000 - - - - - 0.724 - YjeF N-terminal domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050208-755]
35. otx2 766 1.717 - - - - - - - 0.864 0.853 orthodenticle homeobox 2, transcript variant X2
36. si:ch211-42i9.10 si:ch211-42i9.10 25 1.711 - 1.000 - - - 0.711 - - -
37. syt11b ENSDARG00000056105 578 1.708 - 0.974 - - - - - 0.734 - synaptotagmin XIb [Source:ZFIN;Acc:ZDB-GENE-090601-7]
38. nek1 ENSDARG00000022350 158 1.688 - 0.802 - - - 0.886 - - - NIMA-related kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040730-1]
39. TENM2 ENSDARG00000037122 48 1.68 - - - - - 0.851 - 0.829 - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
40. EFCAB6 ENSDARG00000020735 34 1.665 - 0.816 - - - 0.849 - - - EF-hand calcium binding domain 6 [Source:ZFIN;Acc:ZDB-GENE-070828-2]
41. si:ch211-10a23.2 ENSDARG00000060656 471 1.655 - - - - - 0.858 - - 0.797 si:ch211-10a23.2 [Source:ZFIN;Acc:ZDB-GENE-090313-9]
42. zic6 ENSDARG00000071496 402 1.654 - 0.907 - - - 0.747 - - - zic family member 6 [Source:ZFIN;Acc:ZDB-GENE-061207-1]
43. si:ch211-197n1.2 58 1.641 - - - - 0.857 - - - 0.784 si:ch211-197n1.2, transcript variant X1
44. fez1 ENSDARG00000023174 701 1.639 - - - - - - - 0.841 0.798 fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
45. nrsn1 ENSDARG00000111235 123 1.631 - 0.913 - - - - - 0.718 - neurensin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7491]
46. BX324132.5 BX324132.5 115 1.622 - - - - - - - 0.849 0.773
47. cntnap2b ENSDARG00000074558, ENSDARG00000109616, ENSDARG00000116850 559 1.619 - - - - - - - 0.890 0.729 contactin associated protein like 2b [Source:NCBI gene;Acc:563345]
48. cxxc4 ENSDARG00000077817 197 1.615 - - - - - 0.874 - - 0.741 CXXC finger 4 [Source:ZFIN;Acc:ZDB-GENE-090313-179]
49. CABZ01028287.1 CABZ01028287.1 626 1.606 - - - - - 0.871 - - 0.735
50. zfpm2b ENSDARG00000100560 125 1.599 - - - - - - - 0.862 0.737 zinc finger protein, FOG family member 2b [Source:ZFIN;Acc:ZDB-GENE-060130-5]
51. CCDC13 ENSDARG00000063451 10 1.591 - - - - 0.868 - - - 0.723 coiled-coil domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-061207-11]
52. lef1 ENSDARG00000031894 492 1.587 - 0.797 - - - - - 0.790 - lymphoid enhancer-binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-990714-26]
53. si:ch211-202e12.3 401 1.582 - - - - - - - 0.811 0.771 si:ch211-202e12.3, transcript variant X6
54. si:dkey-208k4.1 si:dkey-208k4.1 15 1.582 - - - - 0.731 0.851 - - -
55. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 1.578 - - - - - - - 0.814 0.764 high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
56. DSCAML1 ENSDARG00000098057 321 1.575 - - - - - - - 0.821 0.754 Down syndrome cell adhesion molecule like 1 [Source:ZFIN;Acc:ZDB-GENE-110601-1]
57. celf3a ENSDARG00000034668 2432 1.564 - - - - - - - 0.764 0.800 cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
58. shdb ENSDARG00000062109, ENSDARG00000111006 323 1.558 - 0.767 - - - 0.791 - - - Src homology 2 domain containing transforming protein D, b [Source:ZFIN;Acc:ZDB-GENE-030131-6059]
59. SATB1 SATB1 928 1.555 - - - - - - - 0.783 0.772
60. zgc:100906 ENSDARG00000033599 344 1.554 - - - - - 0.818 - 0.736 - zgc:100906 [Source:ZFIN;Acc:ZDB-GENE-040801-20]
61. zbtb18 ENSDARG00000028228 3653 1.532 - - - - - - - 0.761 0.771 zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
62. lhx9 ENSDARG00000056979 249 1.529 - - - - - - - 0.706 0.823 LIM homeobox 9 [Source:ZFIN;Acc:ZDB-GENE-050417-210]
63. syngr3a ENSDARG00000014871 405 1.526 - 0.806 - - - 0.720 - - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
64. her4.3 ENSDARG00000070770 613 1.525 - - - - - 0.727 - 0.798 - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
65. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 1.522 - 0.713 - - - - - - 0.809 POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
66. stx1b ENSDARG00000000503 2724 1.518 - 0.814 - - - 0.704 - - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
67. sox4a ENSDARG00000004588, ENSDARG00000096389 2213 1.51 - - - - - - - 0.754 0.756 SRY (sex determining region Y)-box 4a [Source:ZFIN;Acc:ZDB-GENE-030131-8290]
68. TMEM17 ENSDARG00000116334 218 1.502 - 0.769 - - 0.733 - - - - transmembrane protein 17 [Source:ZFIN;Acc:ZDB-GENE-070615-15]
69. tbr1b ENSDARG00000004712 248 1.5 - - - - - - - 0.737 0.763 T-box, brain, 1b [Source:ZFIN;Acc:ZDB-GENE-000323-1]
70. wu:fc51f04 wu:fc51f04 7074 1.497 - - - - - - - 0.741 0.756
71. taar14h ENSDARG00000090464 22 1.491 - - - - - - - 0.754 0.737 trace amine associated receptor 14h [Source:ZFIN;Acc:ZDB-GENE-041014-32]
72. FGFBP3 FGFBP3 993 1.49 - - - - - 0.726 - - 0.764
73. tcf7l2 ENSDARG00000004415, ENSDARG00000110486 1920 1.49 - - - - - - - 0.765 0.725 transcription factor 7 like 2 [Source:ZFIN;Acc:ZDB-GENE-991110-8]
74. lgi2a ENSDARG00000111069 965 1.487 - 0.743 - - - 0.744 - - - leucine-rich repeat LGI family, member 2a [Source:ZFIN;Acc:ZDB-GENE-060217-2]
75. ptprz1a ENSDARG00000051814 385 1.474 - - - - - - - 0.766 0.708 protein tyrosine phosphatase, receptor-type, Z polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-090406-1]
76. si:dkey-235h8.1 si:dkey-235h8.1 2457 1.466 - - - - - - - 0.762 0.704
77. jag1a ENSDARG00000030289 1275 1.463 - 0.736 - - - 0.727 - - - jagged 1a [Source:ZFIN;Acc:ZDB-GENE-011128-2]
78. cspg5b ENSDARG00000099793 67 1.453 - - - - - - - 0.733 0.720 chondroitin sulfate proteoglycan 5b [Source:ZFIN;Acc:ZDB-GENE-060503-368]
79. her4.2 ENSDARG00000056729, ENSDARG00000094426 289 1.45 - 0.704 - - - 0.746 - - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
80. fsd1 ENSDARG00000062017 207 1.446 - - - - - - - 0.725 0.721 fibronectin type III and SPRY domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-218]
81. secisbp2 ENSDARG00000073892 79 1.446 - 0.704 - - - 0.742 - - - SECIS binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050208-263]
82. gabbr1b ENSDARG00000016667 14 1.434 - - - - - 0.727 - - 0.707 gamma-aminobutyric acid (GABA) B receptor, 1b [Source:ZFIN;Acc:ZDB-GENE-060503-5]
83. pcdh2ac ENSDARG00000099783 325 1.431 - 0.710 - - - 0.721 - - - protocadherin 2 alpha c [Source:ZFIN;Acc:ZDB-GENE-041118-12]
84. chd5 ENSDARG00000105083 132 1.431 - 0.704 - - - - - - 0.727 chromodomain helicase DNA binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-120314-2]
85. gsx1 ENSDARG00000035735 1243 1.425 - - - - - 0.713 - - 0.712 GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
86. CCSAP CCSAP 147 1.418 - - - - - 0.701 - 0.717 -
87. rgs12a ENSDARG00000009610 284 1.405 - - - - - 0.704 - 0.701 - regulator of G protein signaling 12a [Source:ZFIN;Acc:ZDB-GENE-030131-2614]
88. BX324210.1 BX324210.1 0 1 - 1.000 - - - - - - -
89. mir29b-1 0 1 - 1.000 - - - - - - - microRNA 29b-1
90. CU694445.1 ENSDARG00000111931 7 1 - 1.000 - - - - - - -
91. NPPC ENSDARG00000068126 45 1 - 1.000 - - - - - - - natriuretic peptide C [Source:ZFIN;Acc:ZDB-GENE-070705-24]
92. SCAMP5 SCAMP5 19 1 - 1.000 - - - - - - -
93. si:dkey-42i9.8 ENSDARG00000071541 17 1 - 1.000 - - - - - - - si:dkey-42i9.8 [Source:ZFIN;Acc:ZDB-GENE-050208-412]
94. USP43 USP43 14 1 - 1.000 - - - - - - -
95. zgc:113307 ENSDARG00000044894 17 1 - 1.000 - - - - - - - zgc:113307 [Source:ZFIN;Acc:ZDB-GENE-050522-29]
96. CABZ01073334.1 CABZ01073334.1 1 1 - 1.000 - - - - - - -
97. ddx26b 79 1 - 1.000 - - - - - - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B, transcript variant X1
98. tagln3a ENSDARG00000079805 123 1 - 1.000 - - - - - - - transgelin 3a [Source:ZFIN;Acc:ZDB-GENE-060531-53]
99. pcdh2ab7 7 1 - 1.000 - - - - - - - protocadherin 2 alpha b 7
100. DNAH10 ENSDARG00000061486 29 1 - 1.000 - - - - - - - dynein axonemal heavy chain 10 [Source:HGNC Symbol;Acc:HGNC:2941]

There are 1060 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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