Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lingo1a

Gene Name Gene ID Reads Annotation
lingo1a ENSDARG00000034165 179 leucine rich repeat and Ig domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-080327-16]










Genes with expression patterns similar to lingo1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lingo1a ENSDARG00000034165 179 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 leucine rich repeat and Ig domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-080327-16]
2. nkx1.2lb ENSDARG00000099427 220 3.528 - 0.881 - - 0.772 0.900 0.975 - - NK1 transcription factor related 2-like,b [Source:ZFIN;Acc:ZDB-GENE-040615-2]
3. her3 ENSDARG00000076857 131 2.943 - 1.000 - - - 0.979 0.964 - - hairy-related 3 [Source:ZFIN;Acc:ZDB-GENE-980526-204]
4. arl11l arl11l 31 2.83 - 1.000 - - 0.866 - 0.964 - -
5. KCNS3 KCNS3 82 2.788 - 1.000 - - - 0.954 0.834 - -
6. slc17a6b ENSDARG00000041150 823 2.787 - 1.000 - - - 0.922 0.865 - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
7. entpd3 ENSDARG00000035309 263 2.778 - 0.895 - - - 0.919 0.964 - - ectonucleoside triphosphate diphosphohydrolase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6186]
8. nrxn2a ENSDARG00000061454 291 2.772 - 0.881 - - - 0.950 0.941 - - neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
9. SV2B SV2B 208 2.766 - 0.909 - - - 0.919 0.938 - -
10. prdm14 ENSDARG00000045371 106 2.755 0.791 1.000 - - - - 0.964 - - PR domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2709]
11. tmem91 ENSDARG00000068456 81 2.715 - 1.000 - - - 0.908 0.807 - - transmembrane protein 91 [Source:ZFIN;Acc:ZDB-GENE-060503-581]
12. scrt2 ENSDARG00000056175 4331 2.714 - 0.895 - - - 0.878 0.941 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
13. CT025910.1 CT025910.1 143 2.705 - 1.000 - - - 0.964 0.741 - -
14. amph ENSDARG00000007663 599 2.701 - 0.909 - - - 0.874 0.918 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
15. sez6l2 ENSDARG00000076052 360 2.67 - 0.907 - - - 0.912 0.851 - - seizure related 6 homolog (mouse)-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-189]
16. MAP1A MAP1A 847 2.62 - 0.811 - - - 0.864 0.945 - -
17. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 2.607 0.764 1.000 - - - - 0.843 - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
18. MAP6 MAP6 643 2.601 - 0.927 - - - 0.890 0.784 - -
19. npffr1l2 ENSDARG00000062631 127 2.563 - 0.797 - - - 0.899 0.867 - - neuropeptide FF receptor 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-060526-110]
20. fam219ab ENSDARG00000013813 591 2.549 - 1.000 - - - 0.751 0.798 - - family with sequence similarity 219, member Ab [Source:ZFIN;Acc:ZDB-GENE-050522-213]
21. syt11a ENSDARG00000057913 1145 2.548 - 0.902 - - - 0.917 0.729 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
22. stmn2a ENSDARG00000033234 2272 2.548 - 0.702 - - - 0.943 0.903 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
23. neflb ENSDARG00000012426 298 2.547 - 1.000 - - - 0.715 0.832 - - neurofilament, light polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060312-44]
24. TUSC5 TUSC5 1436 2.541 - 0.701 - - - 0.899 0.941 - -
25. prdm12b ENSDARG00000007430 914 2.52 0.746 - - - - 0.848 0.926 - - PR domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-041114-172]
26. hpca ENSDARG00000018397, ENSDARG00000110115 3866 2.508 - 0.777 - - - 0.938 0.793 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
27. rap2ip rap2ip 681 2.506 - 0.907 - - - 0.884 0.715 - -
28. snap25a ENSDARG00000020609 4537 2.505 - 0.811 - - - 0.806 0.888 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
29. si:ch211-152f6.6 si:ch211-152f6.6 278 2.504 - 0.946 0.757 - - - 0.801 - -
30. nrxn1a ENSDARG00000061647, ENSDARG00000111866 1069 2.498 - 0.815 - - - 0.882 0.801 - - neurexin 1a [Source:ZFIN;Acc:ZDB-GENE-070206-1]
31. stx1b ENSDARG00000000503 2724 2.495 - 0.814 - - - 0.765 0.916 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
32. CHRNB4 ENSDARG00000101677 128 2.482 0.778 0.946 - - - - 0.758 - - cholinergic receptor, nicotinic, beta 4 (neuronal) [Source:ZFIN;Acc:ZDB-GENE-120809-1]
33. pcsk1nl ENSDARG00000076170 1232 2.472 - 0.745 - - - 0.897 0.830 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
34. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 2.468 - 0.763 - - - 0.906 0.799 - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
35. slc1a2b ENSDARG00000102453 3136 2.444 - 0.829 - - - 0.742 0.873 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
36. scg2b ENSDARG00000038574 345 2.385 - - - - 0.756 0.876 0.753 - - secretogranin II (chromogranin C), b [Source:ZFIN;Acc:ZDB-GENE-061103-160]
37. scn8aa ENSDARG00000005775 792 2.378 - 0.754 - - - 0.728 0.896 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
38. eno2 ENSDARG00000014287 2162 2.353 - - - - 0.732 0.907 0.714 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
39. stxbp5a ENSDARG00000002656 318 2.294 - 0.733 - - - 0.705 0.856 - - syntaxin binding protein 5a (tomosyn) [Source:ZFIN;Acc:ZDB-GENE-041001-161]
40. hmgb1b ENSDARG00000030479 10398 2.271 0.770 - - - - 0.744 0.757 - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
41. rbfox3l rbfox3l 34 1.964 - 1.000 - - - - 0.964 - -
42. C10H5orf63 C10H5orf63 17 1.964 - 1.000 - - - - 0.964 - -
43. nebl ENSDARG00000021200 40 1.964 - 1.000 - - - - 0.964 - - nebulette [Source:ZFIN;Acc:ZDB-GENE-050320-151]
44. tecrl2 tecrl2 11 1.964 - 1.000 - - - - 0.964 - -
45. fam163b ENSDARG00000073914 46 1.964 - 1.000 - - - - 0.964 - - family with sequence similarity 163, member B [Source:ZFIN;Acc:ZDB-GENE-091204-96]
46. CABZ01066439.2 CABZ01066439.2 5 1.964 - 1.000 - - - - 0.964 - -
47. CABZ01084273.1 CABZ01084273.1 16 1.964 - 1.000 - - - - 0.964 - -
48. si:dkey-122c11.4 si:dkey-122c11.4 13 1.964 - 1.000 - - - - 0.964 - -
49. TUBB2A TUBB2A 142 1.939 - 1.000 - - - 0.939 - - -
50. st8sia1_1 ENSDARG00000098221 16 1.938 - 1.000 - - - - 0.938 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051005-1]
51. htr3a ENSDARG00000089212 51 1.933 - 1.000 - - - 0.933 - - - 5-hydroxytryptamine (serotonin) receptor 3A [Source:ZFIN;Acc:ZDB-GENE-071012-5]
52. trim46b ENSDARG00000058649 54 1.931 - 1.000 - - - - 0.931 - - tripartite motif containing 46b [Source:ZFIN;Acc:ZDB-GENE-060503-466]
53. CLDN20 26 1.913 - 1.000 - - - 0.913 - - - claudin 20, transcript variant X2
54. atcaya ENSDARG00000071678 344 1.912 - - - - - 0.969 0.943 - - ataxia, cerebellar, Cayman type a [Source:ZFIN;Acc:ZDB-GENE-070705-185]
55. TRPC4_1 TRPC4_1 212 1.91 - 1.000 - - - 0.910 - - -
56. nxph1 ENSDARG00000033447 182 1.907 - - - - - 0.976 0.931 - - neurexophilin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-231]
57. pnoca ENSDARG00000025024 467 1.904 - - - - - 0.919 0.985 - - prepronociceptin a [Source:ZFIN;Acc:ZDB-GENE-101229-1]
58. C19H7orf41 C19H7orf41 2243 1.904 - - - - - 0.991 0.913 - -
59. otpa ENSDARG00000014201 2290 1.897 - - - - - 0.930 0.967 - - orthopedia homeobox a [Source:ZFIN;Acc:ZDB-GENE-070216-1]
60. PLCXD1_3 PLCXD1_3 35 1.896 - 1.000 - - - 0.896 - - -
61. slc17a6a ENSDARG00000001127 337 1.884 - 1.000 - - - - 0.884 - - solute carrier family 17 (vesicular glutamate transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-050105-4]
62. xkr6 xkr6 286 1.884 - - - - - 0.943 0.941 - -
63. adarb1a ENSDARG00000041609 476 1.874 - - - - - 0.973 0.901 - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
64. zgc:153845 62 1.874 - - - - - 0.910 0.964 - - zgc:153845
65. fgf18b ENSDARG00000043962, ENSDARG00000112937 29 1.872 - - - - - 0.908 0.964 - - fibroblast growth factor 18b [Source:ZFIN;Acc:ZDB-GENE-050221-4]
66. gbx1 ENSDARG00000071418 871 1.872 - 0.909 - - - - 0.963 - - gastrulation brain homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-020117-2]
67. TPPP2 ENSDARG00000035338, ENSDARG00000113727 298 1.872 - - - - - 0.948 0.924 - - tubulin polymerization-promoting protein family member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-24]
68. lhx1a ENSDARG00000014018 958 1.867 - 0.903 - - - - 0.964 - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
69. BX957337.1 BX957337.1 1685 1.867 - - - - - 0.936 0.931 - -
70. zgc:113274 ENSDARG00000059235, ENSDARG00000116981 19 1.867 - 1.000 - - - 0.867 - - - zgc:113274 [Source:ZFIN;Acc:ZDB-GENE-050508-2]
71. htr2cl1 ENSDARG00000018228, ENSDARG00000113913 131 1.864 - 1.000 - - - 0.864 - - - 5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled-like 1 [Source:ZFIN;Acc:ZDB-GENE-081104-48]
72. grik4 ENSDARG00000026753 22 1.856 - - - - - 0.892 0.964 - - glutamate receptor, ionotropic, kainate 4 [Source:ZFIN;Acc:ZDB-GENE-070821-5]
73. ROBO3_1 ROBO3_1 468 1.855 - - - - - 0.948 0.907 - -
74. SSBP2 ENSDARG00000099727 22 1.854 - - - - - 0.890 0.964 - - single-stranded DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-090312-197]
75. TMEM57 TMEM57 260 1.854 - - - - - 0.945 0.909 - -
76. si:ch211-138k19.2 si:ch211-138k19.2 398 1.852 - 1.000 - - - - 0.852 - -
77. NPPC_1 NPPC_1 11 1.845 - 0.881 - - - - 0.964 - -
78. CAMK1 CAMK1 28 1.844 - - - - - 0.880 0.964 - -
79. penka ENSDARG00000004869 161 1.843 - 0.991 - - - - 0.852 - - proenkephalin a [Source:ZFIN;Acc:ZDB-GENE-030729-31]
80. thsd7ba ENSDARG00000095022 231 1.842 - - - - - 0.945 0.897 - - thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
81. zgc:113307 ENSDARG00000044894 17 1.842 - 1.000 - - - 0.842 - - - zgc:113307 [Source:ZFIN;Acc:ZDB-GENE-050522-29]
82. ksr2 ENSDARG00000094526 134 1.839 - 0.901 - - - 0.938 - - - kinase suppressor of ras 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8047]
83. dmrt3a ENSDARG00000035290, ENSDARG00000114587 115 1.837 - - - - - 0.858 0.979 - - doublesex and mab-3 related transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-021220-3]
84. nexmifb ENSDARG00000029296 416 1.836 - - - - - 0.990 0.846 - - neurite extension and migration factor b [Source:ZFIN;Acc:ZDB-GENE-140106-18]
85. kcnip1b ENSDARG00000034808, ENSDARG00000111766 136 1.836 - 1.000 - - - 0.836 - - - Kv channel interacting protein 1 b [Source:ZFIN;Acc:ZDB-GENE-041212-57]
86. cbln1 ENSDARG00000057296 165 1.835 - - - - - 0.950 0.885 - - cerebellin 1 precursor [Source:ZFIN;Acc:ZDB-GENE-040718-226]
87. CNTNAP1 ENSDARG00000074524 73 1.833 - - - - - 0.896 0.937 - - contactin associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030916-2]
88. ENSDARG00000086878 ENSDARG00000086878 332 1.832 - 0.898 - - - 0.934 - - -
89. SGIP1 SGIP1 236 1.83 - - - - - 0.896 0.934 - -
90. LRFN2 118 1.83 - - - - - 0.928 0.902 - - leucine rich repeat and fibronectin type III domain containing 2
91. tuba2 ENSDARG00000045014 1490 1.823 - - - - - 0.969 0.854 - - tubulin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1970]
92. neto1 ENSDARG00000068483 13 1.822 - - - - - 0.858 0.964 - - neuropilin (NRP) and tolloid (TLL)-like 1 [Source:ZFIN;Acc:ZDB-GENE-070912-592]
93. FP102801.1_1 FP102801.1_1 238 1.819 - - - - - 0.922 0.897 - -
94. si:ch211-133l11.10 ENSDARG00000005626 381 1.818 - - - - - 0.880 0.938 - - si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
95. scrt1b ENSDARG00000040214, ENSDARG00000110984 533 1.816 - - - - - 0.866 0.950 - - scratch family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-050327-72]
96. atxn1b ENSDARG00000060862 345 1.814 - 1.000 - - - 0.814 - - - ataxin 1b [Source:ZFIN;Acc:ZDB-GENE-061218-2]
97. nptx1l ENSDARG00000074671 569 1.814 - 0.918 - - - 0.896 - - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
98. sncgb ENSDARG00000109715 1014 1.814 - - - - - 0.876 0.938 - - synuclein, gamma b (breast cancer-specific protein 1) [Source:ZFIN;Acc:ZDB-GENE-050522-235]
99. ric8a ENSDARG00000007247 229 1.814 - - - - - 0.940 0.874 - - RIC8 guanine nucleotide exchange factor A [Source:ZFIN;Acc:ZDB-GENE-040927-18]
100. st6galnac5a ENSDARG00000039220 76 1.812 - - - - - 0.903 0.909 - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5a [Source:ZFIN;Acc:ZDB-GENE-070705-488]

There are 2414 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA