Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for limk2

Gene Name Gene ID Reads Annotation
limk2 ENSDARG00000005104 2598 LIM domain kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040718-398]










Genes with expression patterns similar to limk2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. limk2 ENSDARG00000005104 2598 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 LIM domain kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040718-398]
2. GPA33 2465 2.628 - - - - 0.977 0.804 0.847 - - glycoprotein A33 (transmembrane)
3. vgll4b ENSDARG00000103730 5266 2.52 - - - - 0.961 0.765 - 0.794 - vestigial-like family member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-2445]
4. fkbp11 ENSDARG00000037000, ENSDARG00000111059 2888 2.492 0.823 - - - - 0.824 0.845 - - FK506 binding protein 11 [Source:ZFIN;Acc:ZDB-GENE-030616-357]
5. atp6v0ca ENSDARG00000057853 23277 2.475 - - - - 0.748 - 0.841 0.886 - ATPase H+ transporting V0 subunit ca [Source:ZFIN;Acc:ZDB-GENE-020419-23]
6. wasf2 ENSDARG00000024209 5338 2.464 0.949 - - - - 0.706 0.809 - - WAS protein family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-865]
7. sardh ENSDARG00000058102, ENSDARG00000112110 2150 2.461 - - - - 0.973 0.712 0.776 - - sarcosine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-996]
8. elmod2 ENSDARG00000101669 3101 2.455 - 0.875 - - - - 0.716 0.864 - ELMO/CED-12 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060824-2]
9. ARF5 ENSDARG00000070472, ENSDARG00000115687 6101 2.443 - 0.761 - - 0.936 - - - 0.746 ADP-ribosylation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030910-5]
10. adka ENSDARG00000039429 7670 2.42 0.865 - - - - 0.714 0.841 - - adenosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030425-3]
11. f5 ENSDARG00000055705 973 2.411 - 0.785 - - - 0.850 0.776 - - coagulation factor V [Source:ZFIN;Acc:ZDB-GENE-030131-5531]
12. abca3b ENSDARG00000100524 2416 2.388 - 0.763 - - - - 0.728 - 0.897 ATP-binding cassette, sub-family A (ABC1), member 3b [Source:ZFIN;Acc:ZDB-GENE-050517-2]
13. hoga1 ENSDARG00000018944 800 2.383 - 0.817 - - - 0.852 0.714 - - 4-hydroxy-2-oxoglutarate aldolase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2242]
14. shc1 ENSDARG00000075437 3278 2.348 - 0.718 - - - - 0.746 0.884 - SHC (Src homology 2 domain containing) transforming protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2538]
15. uap1 ENSDARG00000052170 1168 2.346 - 0.848 - - - 0.716 0.782 - - UDP-N-acetylglucosamine pyrophosphorylase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1233]
16. si:dkey-226l10.6 ENSDARG00000087483 1651 2.331 - 0.807 - - - - 0.754 - 0.770 si:dkey-226l10.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1550]
17. mfsd6a ENSDARG00000032318 228 2.277 - 0.800 - - - 0.702 0.775 - - major facilitator superfamily domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-050208-335]
18. fkbp3 ENSDARG00000098059 5428 1.922 0.968 - - - 0.954 - - - - FK506 binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030616-419]
19. dnttip2 ENSDARG00000057648 2381 1.915 0.962 - - - 0.953 - - - - deoxynucleotidyltransferase, terminal, interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080513-5]
20. elk3 ENSDARG00000018688, ENSDARG00000110853 1108 1.892 - - - - 0.989 - - - 0.903 ELK3, ETS-domain protein [Source:ZFIN;Acc:ZDB-GENE-030716-2]
21. sas sas 1783 1.891 0.959 - - - - - - - 0.932
22. hmgcrb ENSDARG00000105206 2080 1.882 0.964 - - - - - - - 0.918 3-hydroxy-3-methylglutaryl-CoA reductase b [Source:ZFIN;Acc:ZDB-GENE-051108-1]
23. sel1l ENSDARG00000004581 2246 1.855 0.961 - - - - - - - 0.894 SEL1L, ERAD E3 ligase adaptor subunit [Source:ZFIN;Acc:ZDB-GENE-041001-122]
24. plekhh1 ENSDARG00000053835 2123 1.852 - - - - - - - 0.929 0.923 pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-061219-1]
25. Sep-02 Sep-02 10074 1.851 0.931 - - - 0.920 - - - -
26. atp6ap2 ENSDARG00000008735 5096 1.842 0.955 - - - - - - 0.887 - ATPase H+ transporting accessory protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1960]
27. ppp1r7 ENSDARG00000009740 2606 1.84 - - - - 0.956 - - 0.884 - protein phosphatase 1, regulatory (inhibitor) subunit 7 [Source:ZFIN;Acc:ZDB-GENE-051113-288]
28. qpctla ENSDARG00000061691 869 1.831 0.966 0.865 - - - - - - - glutaminyl-peptide cyclotransferase-like a [Source:ZFIN;Acc:ZDB-GENE-030131-1441]
29. TMEM218 ENSDARG00000027129 716 1.828 - - - - - - - 0.892 0.936 transmembrane protein 218 [Source:ZFIN;Acc:ZDB-GENE-040426-1232]
30. rgrb ENSDARG00000098724 1546 1.827 0.984 - - - - 0.843 - - - retinal G protein coupled receptor b [Source:ZFIN;Acc:ZDB-GENE-050522-447]
31. anxa1b ENSDARG00000100095 7763 1.827 0.943 - - - 0.884 - - - - annexin A1b [Source:ZFIN;Acc:ZDB-GENE-030131-6554]
32. slc48a1b ENSDARG00000026109 1427 1.815 - - - - 0.988 0.827 - - - solute carrier family 48 (heme transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8226]
33. wnt10a ENSDARG00000017155 491 1.815 - - - - - 0.871 - - 0.944 wingless-type MMTV integration site family, member 10a [Source:ZFIN;Acc:ZDB-GENE-990415-278]
34. acvr2aa ENSDARG00000011188 1454 1.811 - 0.822 - - 0.989 - - - - activin A receptor type 2Aa [Source:ZFIN;Acc:ZDB-GENE-980526-227]
35. prrg4 ENSDARG00000030753 1008 1.808 - - - - - - 0.887 - 0.921 proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane) [Source:ZFIN;Acc:ZDB-GENE-050417-112]
36. evpla ENSDARG00000019808 7565 1.8 0.884 - - - 0.916 - - - - envoplakin a [Source:ZFIN;Acc:ZDB-GENE-030829-19]
37. srsf6a ENSDARG00000013729 8576 1.8 0.925 - - - 0.875 - - - - serine/arginine-rich splicing factor 6a [Source:ZFIN;Acc:ZDB-GENE-040426-2824]
38. itga5 ENSDARG00000006353 1876 1.795 - 0.811 - - 0.984 - - - - integrin, alpha 5 (fibronectin receptor, alpha polypeptide) [Source:ZFIN;Acc:ZDB-GENE-031116-52]
39. hagh ENSDARG00000025338 2911 1.795 0.938 - - - - - 0.857 - - hydroxyacylglutathione hydrolase [Source:ZFIN;Acc:ZDB-GENE-030131-8921]
40. FP326665.1 FP326665.1 1893 1.793 0.938 - - - - 0.855 - - -
41. arglu1a ENSDARG00000019223 8716 1.784 0.835 - - - 0.949 - - - - arginine and glutamate rich 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2914]
42. nrp1a ENSDARG00000102153 4154 1.781 0.933 - - - 0.848 - - - - neuropilin 1a [Source:ZFIN;Acc:ZDB-GENE-030519-2]
43. ist1 ENSDARG00000051888 4536 1.781 0.946 - - - - - - - 0.835 increased sodium tolerance 1 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-179]
44. zgc:158374 zgc:158374 2227 1.778 0.899 - - - - - 0.879 - -
45. gabpb2a ENSDARG00000007943 1570 1.777 - - - - 0.989 - - 0.788 - GA binding protein transcription factor subunit beta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5733]
46. nrg1 ENSDARG00000104314 1081 1.769 0.964 0.805 - - - - - - - neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
47. ddi2 ENSDARG00000006477 4190 1.76 0.972 - - - - - - 0.788 - DNA-damage inducible protein 2 [Source:ZFIN;Acc:ZDB-GENE-031030-15]
48. fzd7a ENSDARG00000060004, ENSDARG00000115544 4171 1.757 - - - - 0.931 - - 0.826 - frizzled class receptor 7a [Source:ZFIN;Acc:ZDB-GENE-990415-223]
49. cebpd ENSDARG00000087303 2195 1.754 0.940 0.814 - - - - - - - CCAAT enhancer binding protein delta [Source:ZFIN;Acc:ZDB-GENE-020111-4]
50. sid4 sid4 1358 1.746 0.969 - - - - - 0.777 - -
51. pak2a ENSDARG00000068177 8931 1.743 - - - - 0.919 - - - 0.824 p21 protein (Cdc42/Rac)-activated kinase 2a [Source:ZFIN;Acc:ZDB-GENE-021011-2]
52. ddx6 ENSDARG00000061338 2514 1.738 - - - - - - - 0.808 0.930 DEAD (Asp-Glu-Ala-Asp) box helicase 6 [Source:ZFIN;Acc:ZDB-GENE-070912-83]
53. churc1 ENSDARG00000010831, ENSDARG00000113360 1271 1.735 - 0.846 - - - - - - 0.889 churchill domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041001-150]
54. ABHD12B ABHD12B 1877 1.735 0.944 - - - - 0.791 - - -
55. NUAK1_1 NUAK1_1 1782 1.734 0.963 - - - - 0.771 - - -
56. fga ENSDARG00000020741 5580 1.733 0.971 - - - - 0.762 - - - fibrinogen alpha chain [Source:ZFIN;Acc:ZDB-GENE-031010-21]
57. IDH2 ENSDARG00000003795 18659 1.731 0.808 - - - 0.923 - - - - isocitrate dehydrogenase 2 (NADP+), mitochondrial [Source:ZFIN;Acc:ZDB-GENE-031118-95]
58. CABZ01072607.1 ENSDARG00000113761 784 1.731 - - - - 0.990 0.741 - - - dynein cytoplasmic 2 heavy chain 1 [Source:NCBI gene;Acc:100332402]
59. arpc1a ENSDARG00000008383 7353 1.723 - - - - 0.967 - 0.756 - - actin related protein 2/3 complex, subunit 1A [Source:ZFIN;Acc:ZDB-GENE-040116-1]
60. stk25a ENSDARG00000002210 372 1.721 0.968 - - - - 0.753 - - - serine/threonine kinase 25a [Source:ZFIN;Acc:ZDB-GENE-041010-92]
61. maf1 ENSDARG00000013122 3365 1.721 - 0.741 - - 0.980 - - - - MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
62. epas1a ENSDARG00000008697 3225 1.719 - - - - - 0.884 0.835 - - endothelial PAS domain protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4490]
63. kidins220b ENSDARG00000017338 1937 1.719 - - - - - - - 0.885 0.834 kinase D-interacting substrate 220b [Source:ZFIN;Acc:ZDB-GENE-030131-7824]
64. vkorc1 ENSDARG00000086183 1212 1.715 - 0.808 - - - - - - 0.907 vitamin K epoxide reductase complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2286]
65. serpina1l ENSDARG00000090850 10625 1.714 - - - - 0.906 - 0.808 - - serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1, like [Source:ZFIN;Acc:ZDB-GENE-040721-3]
66. serpinh1a ENSDARG00000075954 6488 1.714 0.945 - - - - - 0.769 - - serpin peptidase inhibitor, clade H (heat shock protein 47), member 1a [Source:ZFIN;Acc:ZDB-GENE-080219-21]
67. cnksr1 ENSDARG00000032932, ENSDARG00000109531 2272 1.712 - 0.796 - - - - - - 0.916 connector enhancer of kinase suppressor of Ras 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1802]
68. dusp11 ENSDARG00000038156 2490 1.711 - - - - - - - 0.807 0.904 dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) [Source:ZFIN;Acc:ZDB-GENE-050417-226]
69. CT030204.3 CT030204.3 486 1.711 - 0.775 - - - - - - 0.936
70. ndufv2 ENSDARG00000013044 3758 1.708 0.952 - - - - - - - 0.756 NADH:ubiquinone oxidoreductase core subunit V2 [Source:ZFIN;Acc:ZDB-GENE-040426-1713]
71. SLC22A31 ENSDARG00000078882 1474 1.708 - - - - - 0.825 0.883 - - solute carrier family 22, member 31 [Source:ZFIN;Acc:ZDB-GENE-130530-858]
72. tm9sf2 ENSDARG00000003866, ENSDARG00000115213 3888 1.707 0.943 - - - - - 0.764 - - transmembrane 9 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6302]
73. tet3 ENSDARG00000062646 6672 1.702 - - - - 0.918 - - 0.784 - tet methylcytosine dioxygenase 3 [Source:ZFIN;Acc:ZDB-GENE-060526-109]
74. siah1 ENSDARG00000030871 1590 1.702 - - - - - - - 0.828 0.874 siah E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-010319-31]
75. nrg2a ENSDARG00000077818 854 1.7 - 0.710 - - 0.990 - - - - neuregulin 2a [Source:ZFIN;Acc:ZDB-GENE-070615-10]
76. necap2 ENSDARG00000046002 4372 1.699 0.982 - - - - - 0.717 - - NECAP endocytosis associated 2 [Source:ZFIN;Acc:ZDB-GENE-050522-67]
77. gtf2a1 ENSDARG00000011000 2026 1.697 0.963 - - - - - - - 0.734 general transcription factor IIA, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2694]
78. ppapdc1b ppapdc1b 2866 1.694 0.966 - - - - - - 0.728 -
79. ahcyl1 ENSDARG00000056331 1765 1.694 - - - - - 0.783 - - 0.911 adenosylhomocysteinase-like 1 [Source:ZFIN;Acc:ZDB-GENE-021206-7]
80. sidt2 ENSDARG00000045976 1997 1.694 - - - - - 0.843 0.851 - - SID1 transmembrane family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7356]
81. rab14 ENSDARG00000074246 4084 1.693 0.957 - - - - 0.736 - - - RAB14, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030826-20]
82. kif7 ENSDARG00000033099 971 1.692 - 0.796 - - - - - 0.896 - kinesin family member 7 [Source:ZFIN;Acc:ZDB-GENE-050307-1]
83. map9 ENSDARG00000037276, ENSDARG00000115648 581 1.691 - 0.795 - - - - - 0.896 - microtubule-associated protein 9 [Source:ZFIN;Acc:ZDB-GENE-080225-36]
84. dcun1d2 dcun1d2 1721 1.69 - - - - - 0.783 - - 0.907
85. emilin3a ENSDARG00000078052 1652 1.69 - - - - 0.846 - - - 0.844 elastin microfibril interfacer 3a [Source:ZFIN;Acc:ZDB-GENE-080612-2]
86. zgc:110339 ENSDARG00000046030 8180 1.689 0.820 - - - - - - 0.869 - zgc:110339 [Source:ZFIN;Acc:ZDB-GENE-050417-323]
87. olfml2a ENSDARG00000005648 1157 1.689 - - - - - - 0.743 - 0.946 olfactomedin-like 2A [Source:ZFIN;Acc:ZDB-GENE-081105-107]
88. ash2l ENSDARG00000060392 4916 1.686 - 0.734 - - 0.952 - - - - ash2 like, histone lysine methyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-494]
89. wdfy2 ENSDARG00000040453 406 1.686 - - - - - 0.747 - - 0.939 WD repeat and FYVE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041111-211]
90. mapk14a ENSDARG00000000857, ENSDARG00000112397 1743 1.685 - - - - - - 0.802 - 0.883 mitogen-activated protein kinase 14a [Source:ZFIN;Acc:ZDB-GENE-010202-2]
91. tmeff1b ENSDARG00000056740 11253 1.684 0.954 - - - - - - 0.730 - transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]
92. sec61a1 ENSDARG00000021669 20408 1.683 - - - - 0.939 - 0.744 - - Sec61 translocon alpha 1 subunit [Source:ZFIN;Acc:ZDB-GENE-020418-2]
93. rpia ENSDARG00000056640, ENSDARG00000110576 8288 1.682 - - - - - 0.836 0.846 - - ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase) [Source:ZFIN;Acc:ZDB-GENE-041114-24]
94. reep3 reep3 2536 1.68 - - - - - 0.706 - - 0.974
95. CABZ01087670.1 CABZ01087670.1 411 1.679 - 0.786 - - - - - 0.893 -
96. furina ENSDARG00000062909, ENSDARG00000117158 6313 1.676 - - - - - - 0.717 - 0.959 furin (paired basic amino acid cleaving enzyme) a [Source:ZFIN;Acc:ZDB-GENE-040901-1]
97. pck1 ENSDARG00000013522 1657 1.675 0.944 - - - - - 0.731 - - phosphoenolpyruvate carboxykinase 1 (soluble) [Source:ZFIN;Acc:ZDB-GENE-030909-11]
98. b3gnt2l ENSDARG00000068219 1875 1.674 - 0.823 - - - - 0.851 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2, like [Source:ZFIN;Acc:ZDB-GENE-061207-60]
99. cetn4 ENSDARG00000041215 898 1.669 - - - - - - 0.728 - 0.941 centrin 4 [Source:ZFIN;Acc:ZDB-GENE-030826-21]
100. ypel5 ENSDARG00000088929 1011 1.669 - - - - - 0.744 - - 0.925 yippee-like 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1220]

There are 2122 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA