Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lim2.3

Gene Name Gene ID Reads Annotation
lim2.3 ENSDARG00000037402 302 lens intrinsic membrane protein 2.3 [Source:ZFIN;Acc:ZDB-GENE-040718-327]










Genes with expression patterns similar to lim2.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lim2.3 ENSDARG00000037402 302 5 - - 1.000 1.000 1.000 - - 1.000 1.000 lens intrinsic membrane protein 2.3 [Source:ZFIN;Acc:ZDB-GENE-040718-327]
2. lim2.4 ENSDARG00000015445 791 4.8 - - 0.989 0.984 0.971 - - 0.938 0.918 lens intrinsic membrane protein 2.4 [Source:ZFIN;Acc:ZDB-GENE-040718-104]
3. cryba2a ENSDARG00000030349 1342 4.717 - - 0.989 0.984 0.985 - - 0.906 0.853 crystallin, beta A2a [Source:ZFIN;Acc:ZDB-GENE-040625-8]
4. mipa ENSDARG00000037285, ENSDARG00000116133 507 4.702 - - 0.983 0.978 0.981 - - 0.903 0.857 major intrinsic protein of lens fiber a [Source:ZFIN;Acc:ZDB-GENE-040801-41]
5. cryba1l1 ENSDARG00000032929 1868 4.689 - - 0.985 0.797 0.972 - - 0.966 0.969 crystallin, beta A1, like 1 [Source:ZFIN;Acc:ZDB-GENE-050417-249]
6. crygm2d10 ENSDARG00000087765 358 4.661 - - 0.958 0.956 0.967 - - 0.812 0.968 crystallin, gamma M2d10 [Source:ZFIN;Acc:ZDB-GENE-071004-96]
7. cx44.1 cx44.1 799 4.648 - - 0.940 0.961 0.979 - - 0.926 0.842
8. si:ch211-212n6.16 si:ch211-212n6.16 314 4.645 - - 0.963 0.951 0.904 - - 0.846 0.981
9. mipb ENSDARG00000013963 753 4.636 - - 0.913 0.924 0.869 - - 0.993 0.937 major intrinsic protein of lens fiber b [Source:ZFIN;Acc:ZDB-GENE-050706-86]
10. crygmx ENSDARG00000053862 482 4.626 - - 0.927 0.969 0.996 - - 0.879 0.855 crystallin, gamma MX [Source:ZFIN;Acc:ZDB-GENE-030131-7732]
11. crygm2d12 ENSDARG00000069801, ENSDARG00000113681 394 4.604 - - 0.933 0.940 0.885 - - 0.884 0.962 crystallin, gamma M2d12 [Source:ZFIN;Acc:ZDB-GENE-070822-19]
12. lim2.1 ENSDARG00000068974, ENSDARG00000114525 233 4.587 - - 0.921 0.924 0.963 - - 0.936 0.843 lens intrinsic membrane protein 2.1 [Source:ZFIN;Acc:ZDB-GENE-050522-398]
13. zgc:162402 zgc:162402 298 4.544 - - 0.860 0.946 0.882 - - 0.863 0.993
14. zgc:110053 zgc:110053 69 4.537 - - 0.938 0.971 0.830 - - 0.965 0.833
15. si:ch211-212n6.18 si:ch211-212n6.18 233 4.406 - - 0.824 0.963 0.929 - - 0.839 0.851
16. cx23 ENSDARG00000054150 115 4.39 - - 0.836 0.972 0.968 - - 0.814 0.800 connexin 23 [Source:ZFIN;Acc:ZDB-GENE-050320-121]
17. cryba1l2 ENSDARG00000014803 47 4.384 - - 0.743 0.957 0.916 - - 0.923 0.845 crystallin, beta A1, like 2 [Source:ZFIN;Acc:ZDB-GENE-041010-40]
18. prox2 ENSDARG00000041952, ENSDARG00000117137 112 4.377 - - 0.939 0.961 0.762 - - 0.890 0.825 prospero homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-081003-3]
19. capn3a ENSDARG00000041864 89 4.37 - - 0.954 0.868 0.826 - - 0.867 0.855 calpain 3a, (p94) [Source:ZFIN;Acc:ZDB-GENE-040912-97]
20. crygm2d4 ENSDARG00000087164, ENSDARG00000115295 138 4.363 - - 0.886 0.935 0.898 - - 0.804 0.840 crystallin, gamma M2d4 [Source:ZFIN;Acc:ZDB-GENE-060918-3]
21. crygm2d14 ENSDARG00000087301 66 4.318 - - 0.926 0.842 0.888 - - 0.814 0.848 crystallin, gamma M2d14 [Source:ZFIN;Acc:ZDB-GENE-070822-20]
22. crygm2d1 ENSDARG00000087324 258 4.282 - - 0.797 0.974 0.829 - - 0.830 0.852 crystallin, gamma M2d1 [Source:ZFIN;Acc:ZDB-GENE-050522-395]
23. zgc:165347_1 zgc:165347_1 69 4.275 - - 0.861 0.951 0.829 - - 0.790 0.844
24. crybb1l1 ENSDARG00000007576 1020 3.873 - - 0.988 - 0.985 - - 0.951 0.949 crystallin, beta B1, like 1 [Source:ZFIN;Acc:ZDB-GENE-100112-3]
25. crybb1 ENSDARG00000068507 2255 3.781 - - 0.948 0.937 0.986 - - 0.910 - crystallin, beta B1 [Source:ZFIN;Acc:ZDB-GENE-010813-1]
26. crygm2d13 ENSDARG00000057460 1093 3.759 - - 0.995 0.964 0.867 - - 0.933 - crystallin, gamma M2d13 [Source:ZFIN;Acc:ZDB-GENE-040718-105]
27. crygmxl2 ENSDARG00000074001 282 3.757 - - 0.957 0.912 - - - 0.892 0.996 crystallin, gamma MX, like 2 [Source:ZFIN;Acc:ZDB-GENE-050522-401]
28. crygn2 ENSDARG00000030411 2551 3.714 - - 0.988 0.918 0.959 - - - 0.849 crystallin, gamma N2 [Source:ZFIN;Acc:ZDB-GENE-040801-16]
29. si:ch211-145g9.7 32 3.699 - - 0.986 0.936 0.937 - - - 0.840 si:ch211-145g9.7, transcript variant X1
30. zgc:86723 zgc:86723 299 3.622 - - 0.981 0.937 - - - 0.849 0.855
31. cryba2b ENSDARG00000041925 4329 3.6 - - 0.929 0.816 0.942 - - 0.913 - crystallin, beta A2b [Source:ZFIN;Acc:ZDB-GENE-040718-324]
32. cryba4 ENSDARG00000024548 111 3.594 - - 0.893 - 0.944 - - 0.907 0.850 crystallin, beta A4 [Source:ZFIN;Acc:ZDB-GENE-050522-143]
33. cps1 ENSDARG00000020028 67 3.551 - - - 0.932 0.892 - - 0.869 0.858 carbamoyl-phosphate synthase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-081105-17]
34. cryba1b ENSDARG00000053875 3256 3.506 - - 0.974 0.861 - - - 0.753 0.918 crystallin, beta A1b [Source:ZFIN;Acc:ZDB-GENE-040718-326]
35. zgc:165347 zgc:165347 1358 3.506 - - 0.911 0.923 0.922 - - 0.750 -
36. grifin ENSDARG00000033382 141 3.504 - - 0.958 0.823 - - - 0.878 0.845 galectin-related inter-fiber protein [Source:ZFIN;Acc:ZDB-GENE-040801-163]
37. crygm2d5 ENSDARG00000069792 207 3.501 - - 0.875 0.882 - - - 0.768 0.976 crystallin, gamma M2d5 [Source:ZFIN;Acc:ZDB-GENE-060918-4]
38. crygm2d8 ENSDARG00000116164 698 3.49 - - 0.937 - 0.842 - - 0.861 0.850 crystallin, gamma M2d8 [Source:ZFIN;Acc:ZDB-GENE-040718-321]
39. crygm2d16 ENSDARG00000076790 129 3.482 - - 0.827 0.917 - - - 0.888 0.850 crystallin, gamma M2d16 [Source:ZFIN;Acc:ZDB-GENE-071004-53]
40. crygm2d6 ENSDARG00000073874 38 3.453 - - 0.912 0.921 - - - 0.769 0.851 crystallin, gamma M2d6 [Source:ZFIN;Acc:ZDB-GENE-040625-145]
41. si:ch211-274p24.3 si:ch211-274p24.3 72 3.406 - - 0.892 - 0.990 - - 0.776 0.748
42. nrl ENSDARG00000100466 41 3.332 - - 0.856 - 0.903 - - 0.737 0.836 neural retina leucine zipper [Source:ZFIN;Acc:ZDB-GENE-050729-1]
43. crybb1l2 ENSDARG00000016793 723 2.886 - - 0.947 - 0.952 - - 0.987 - crystallin, beta B1, like 2 [Source:ZFIN;Acc:ZDB-GENE-070822-18]
44. cx50.5 cx50.5 15 2.748 - - - 0.927 - - - 0.984 0.837
45. crygm2d7 ENSDARG00000076572, ENSDARG00000116634 229 2.673 - - - 0.968 - - - 0.845 0.860 crystallin, gamma M2d7 [Source:ZFIN;Acc:ZDB-GENE-060918-5]
46. si:ch211-152c2.3 ENSDARG00000045898 3448 2.66 - - 0.911 0.863 0.886 - - - - si:ch211-152c2.3 [Source:ZFIN;Acc:ZDB-GENE-030131-9914]
47. crygm2d9 ENSDARG00000115701 28 2.608 - - - 0.955 - - - 0.823 0.830 crystallin, gamma M2d9 [Source:ZFIN;Acc:ZDB-GENE-081105-81]
48. crygm2d3 ENSDARG00000088823 1560 2.595 - - 0.943 0.822 - - - 0.830 - crystallin, gamma M2d3 [Source:ZFIN;Acc:ZDB-GENE-060918-2]
49. cryaa ENSDARG00000053502, ENSDARG00000113469 80 2.595 - - - 0.823 - - - 0.927 0.845 crystallin, alpha A [Source:ZFIN;Acc:ZDB-GENE-020508-1]
50. CU929052.1 CU929052.1 642 2.568 - - 0.986 0.860 0.722 - - - -
51. zgc:165525 zgc:165525 207 2.523 - - 0.958 - 0.818 - - - 0.747
52. cryba1a ENSDARG00000041141 8 2.502 - - 0.792 0.876 - - - - 0.834 crystallin, beta A1a [Source:ZFIN;Acc:ZDB-GENE-040718-107]
53. dnase1l3l dnase1l3l 16 2.382 - - 0.792 - - - - 0.738 0.852
54. vsx2 ENSDARG00000005574 102 2.373 - - 0.748 0.918 - - - 0.707 - visual system homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-001222-1]
55. ahr1b ENSDARG00000023537 44 2.358 - - 0.829 - 0.796 - - 0.733 - aryl hydrocarbon receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050922-1]
56. hmx1 ENSDARG00000095651, ENSDARG00000109725, ENSDARG00000111765 151 2.245 - - - 0.810 0.702 - - 0.733 - H6 family homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-080204-54]
57. hmx4 ENSDARG00000007941, ENSDARG00000115000, ENSDARG00000116208 447 2.218 - - 0.802 0.704 0.712 - - - - H6 family homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-060825-142]
58. fabp11b ENSDARG00000002311 354 1.858 - - - 0.936 0.922 - - - - fatty acid binding protein 11b [Source:ZFIN;Acc:ZDB-GENE-050522-391]
59. barhl2 ENSDARG00000104361, ENSDARG00000114681, ENSDARG00000115723 2000 1.745 - - 0.827 - 0.918 - - - - BarH-like homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-050913-153]
60. foxq2 ENSDARG00000071394 3 1.716 - - - - - - - 0.878 0.838 forkhead box Q2 [Source:ZFIN;Acc:ZDB-GENE-050208-663]
61. otc ENSDARG00000062147 95 1.701 - - - - - - - 0.876 0.825 ornithine carbamoyltransferase [Source:ZFIN;Acc:ZDB-GENE-070912-422]
62. lctlb ENSDARG00000016337 35 1.689 - - - - - - - 0.981 0.708 lactase-like b [Source:ZFIN;Acc:ZDB-GENE-060503-93]
63. crx ENSDARG00000011989, ENSDARG00000113850 330 1.656 - - - - - - - 0.852 0.804 cone-rod homeobox [Source:ZFIN;Acc:ZDB-GENE-010403-1]
64. lim2.5 ENSDARG00000041295 56 1.641 - - - - - - - 0.893 0.748 lens intrinsic membrane protein 2.5 [Source:ZFIN;Acc:ZDB-GENE-050320-94]
65. crybb1l3 ENSDARG00000007655 33 1.64 - - 0.805 - - - - - 0.835 crystallin, beta B1, like 3 [Source:ZFIN;Acc:ZDB-GENE-070820-11]
66. crygm2d15 ENSDARG00000069826 48 1.632 - - - - - - - 0.803 0.829 crystallin, gamma M2d15 [Source:ZFIN;Acc:ZDB-GENE-040718-322]
67. pmelb ENSDARG00000033760 206 1.62 - - - - 0.812 - - 0.808 - premelanosome protein b [Source:ZFIN;Acc:ZDB-GENE-050912-2]
68. pvalb5 ENSDARG00000032836 242 1.615 - - - 0.899 0.716 - - - - parvalbumin 5 [Source:ZFIN;Acc:ZDB-GENE-050417-336]
69. CCDC88A_1 CCDC88A_1 12 1.608 - - - - - - - 0.893 0.715
70. crygmxl1 ENSDARG00000018797 7 1.596 - - - - - - - 0.754 0.842 crystallin, gamma MX, like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-392]
71. trh ENSDARG00000006868 31 1.569 - - - 0.800 - - - 0.769 - thyrotropin-releasing hormone [Source:ZFIN;Acc:ZDB-GENE-020930-1]
72. ggt1a ENSDARG00000023526 26 1.565 - - - - - - - 0.726 0.839 gamma-glutamyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1388]
73. fabp11a ENSDARG00000017299 167 1.563 - - - 0.751 0.812 - - - - fatty acid binding protein 11a [Source:ZFIN;Acc:ZDB-GENE-040912-132]
74. atoh7 ENSDARG00000069552 254 1.519 - - - 0.740 - - - 0.779 - atonal bHLH transcription factor 7 [Source:ZFIN;Acc:ZDB-GENE-000926-1]
75. si:dkey-34f9.3 ENSDARG00000077813 3 1.486 - - - - - - - 0.759 0.727 si:dkey-34f9.3 [Source:ZFIN;Acc:ZDB-GENE-081104-410]
76. ydjc ENSDARG00000062655 5 1.482 - - - - 0.728 - - 0.754 - YdjC chitooligosaccharide deacetylase homolog [Source:ZFIN;Acc:ZDB-GENE-060526-182]
77. npvf ENSDARG00000036227 23 1.468 - - - - - - - 0.754 0.714 neuropeptide VF precursor [Source:ZFIN;Acc:ZDB-GENE-070424-226]
78. SLC39A14 ENSDARG00000102387 4 1.466 - - 0.731 - 0.735 - - - - solute carrier family 39 (zinc transporter), member 14 [Source:ZFIN;Acc:ZDB-GENE-060315-2]
79. CU367845.1_1 CU367845.1_1 43 1.446 - - 0.702 0.744 - - - - -
80. chgb ENSDARG00000076500 42 1.446 - - - 0.714 - - - 0.732 - chromogranin B [Source:ZFIN;Acc:ZDB-GENE-070705-268]
81. zgc:114037_1 10 0.954 - - - - - - - 0.954 - zgc:114037
82. grin1b ENSDARG00000025728 4 0.954 - - - - - - - 0.954 - glutamate receptor, ionotropic, N-methyl D-aspartate 1b [Source:ZFIN;Acc:ZDB-GENE-051202-2]
83. pou3f3b ENSDARG00000095896 3 0.954 - - - - - - - 0.954 - POU class 3 homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-980526-140]
84. vax1 ENSDARG00000021916, ENSDARG00000114230 152 0.951 - - - - - - - 0.951 - ventral anterior homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030904-9]
85. vax2 ENSDARG00000058702 175 0.938 - - - - - - - 0.938 - ventral anterior homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030904-8]
86. pax6l pax6l 54 0.934 - - - - - - - 0.934 -
87. htr2a htr2a 1 0.929 - - - - 0.929 - - - -
88. efr3a ENSDARG00000005163, ENSDARG00000115083 7 0.929 - - - - 0.929 - - - - EFR3 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1681]
89. SLC38A8 SLC38A8 17 0.927 - - - - - - - 0.927 -
90. si:dkey-21o19.2 ENSDARG00000088900 52 0.914 - - - - - - - 0.914 - si:dkey-21o19.2 [Source:ZFIN;Acc:ZDB-GENE-090313-241]
91. foxg1a ENSDARG00000070769 928 0.908 - - - 0.908 - - - - - forkhead box G1a [Source:ZFIN;Acc:ZDB-GENE-990415-267]
92. HIST1H4J_4 HIST1H4J_4 9 0.902 - - - - 0.902 - - - -
93. zgc:171531 zgc:171531 77 0.902 - - - - - - - 0.902 -
94. neurod6a ENSDARG00000040008 17 0.898 - - - - 0.898 - - - - neuronal differentiation 6a [Source:ZFIN;Acc:ZDB-GENE-010608-1]
95. si:dkey-206f10.1 ENSDARG00000032838 18 0.893 - - - 0.893 - - - - - si:dkey-206f10.1 [Source:ZFIN;Acc:ZDB-GENE-041014-154]
96. six7 ENSDARG00000070107 140 0.892 - - - - - - - 0.892 - SIX homeobox 7 [Source:ZFIN;Acc:ZDB-GENE-990825-28]
97. zgc:163061 ENSDARG00000075538, ENSDARG00000076766 54 0.891 - - - 0.891 - - - - - zgc:163061 [Source:ZFIN;Acc:ZDB-GENE-070410-132]
98. si:ch211-191a6.3 si:ch211-191a6.3 6 0.888 - - - - 0.888 - - - -
99. pcdh8 ENSDARG00000006467 317 0.88 - - - - - - - 0.880 - protocadherin 8 [Source:ZFIN;Acc:ZDB-GENE-980526-242]
100. pmchl ENSDARG00000076978 3 0.88 - - - - - - - 0.880 - pro-melanin-concentrating hormone, like [Source:ZFIN;Acc:ZDB-GENE-030131-7863]

There are 297 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA