Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lifrb

Gene Name Gene ID Reads Annotation
lifrb ENSDARG00000039863 102 leukemia inhibitory factor receptor alpha b [Source:ZFIN;Acc:ZDB-GENE-080107-2]










Genes with expression patterns similar to lifrb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lifrb ENSDARG00000039863 102 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 leukemia inhibitory factor receptor alpha b [Source:ZFIN;Acc:ZDB-GENE-080107-2]
2. gtf3aa ENSDARG00000030267 217 2.431 - 0.925 - 0.752 - - 0.754 - - general transcription factor IIIAa [Source:ZFIN;Acc:ZDB-GENE-041006-1]
3. bicc1b ENSDARG00000070497 406 1.745 - 0.932 - 0.813 - - - - - BicC family RNA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-080522-3]
4. CR318603.2 ENSDARG00000105536 199 1.733 - 0.768 - 0.965 - - - - -
5. NMUR1 NMUR1 30 1.697 - - - 0.995 - 0.702 - - -
6. U1_25 U1_25 283 1.685 - - - 0.904 - - 0.781 - -
7. slc16a12a ENSDARG00000017773 47 1.673 - 0.715 - 0.958 - - - - - solute carrier family 16, member 12a [Source:ZFIN;Acc:ZDB-GENE-080721-24]
8. wdr46 ENSDARG00000095879 374 1.656 - - - 0.926 - - 0.730 - - WD repeat domain 46 [Source:ZFIN;Acc:ZDB-GENE-040426-1264]
9. si:dkey-17e16.18 47 1.647 - - 0.778 - 0.869 - - - - si:dkey-17e16.18
10. prdm8b ENSDARG00000054683, ENSDARG00000112649 270 1.638 - 0.817 - 0.821 - - - - - PR domain containing 8b [Source:ZFIN;Acc:ZDB-GENE-060526-174]
11. ANKS1A ANKS1A 138 1.622 - - - - 0.877 0.745 - - -
12. prpf3_1 ENSDARG00000086425, ENSDARG00000116776 84 1.584 - - - 0.883 - 0.701 - - - PRP3 pre-mRNA processing factor 3 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040823-3]
13. zgc:173480 171 1.576 - 0.818 - - 0.758 - - - - zgc:173480
14. PLEKHG3 72 1.571 0.870 - - - - 0.701 - - - pleckstrin homology and RhoGEF domain containing G3, transcript variant X5
15. abhd15a ENSDARG00000078768 409 1.563 - 0.746 - 0.817 - - - - - abhydrolase domain containing 15a [Source:ZFIN;Acc:ZDB-GENE-131121-270]
16. SLC5A6 SLC5A6 179 1.557 0.853 - - - - 0.704 - - -
17. SDSL ENSDARG00000074698 34 1.518 0.817 - - - - 0.701 - - - serine dehydratase-like [Source:ZFIN;Acc:ZDB-GENE-131121-410]
18. CABZ01085858.1 CABZ01085858.1 355 1.506 - 0.763 - - - - 0.743 - -
19. SPIN4 SPIN4 120 1.498 0.783 - - - - 0.715 - - -
20. si:dkey-253d23.8 ENSDARG00000094427 26 1.495 - 0.718 - - 0.777 - - - - si:dkey-253d23.8 [Source:ZFIN;Acc:ZDB-GENE-050208-568]
21. RNF39 RNF39 52 1.489 - 0.718 - - 0.771 - - - -
22. pcgf5b ENSDARG00000052388 163 1.487 - 0.767 - - - - 0.720 - - polycomb group ring finger 5b [Source:ZFIN;Acc:ZDB-GENE-060512-34]
23. fastkd3 ENSDARG00000100440 144 1.46 - 0.745 - - - 0.715 - - - FAST kinase domains 3 [Source:ZFIN;Acc:ZDB-GENE-050208-273]
24. BX470254.1 ENSDARG00000097402 1389 1.455 - 0.751 - 0.704 - - - - -
25. ush1c ENSDARG00000051876, ENSDARG00000112799 25 1.452 - 0.751 - - - 0.701 - - - Usher syndrome 1C [Source:ZFIN;Acc:ZDB-GENE-060312-41]
26. si:dkey-9i23.6 ENSDARG00000094678 58 1.452 - - 0.751 - - 0.701 - - - si:dkey-9i23.6 [Source:ZFIN;Acc:ZDB-GENE-090313-365]
27. CABZ01065246.2 CABZ01065246.2 45 1.428 0.704 - - - - 0.724 - - -
28. ctsl.1 ENSDARG00000003902 25 0.994 - - - 0.994 - - - - - cathepsin L.1 [Source:ZFIN;Acc:ZDB-GENE-040718-61]
29. ENSDARG00000032477 ENSDARG00000032477 18 0.994 - - - 0.994 - - - - -
30. si:dkeyp-69e1.8 ENSDARG00000055731 35 0.994 - - - 0.994 - - - - - si:dkeyp-69e1.8 [Source:ZFIN;Acc:ZDB-GENE-070912-676]
31. ABCD2_1 ABCD2_1 13 0.992 - - - 0.992 - - - - -
32. got1l1 ENSDARG00000053644 49 0.989 - - - 0.989 - - - - - glutamic-oxaloacetic transaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060929-556]
33. CABZ01064972.1 ENSDARG00000098966 199 0.988 - - - 0.988 - - - - - uncharacterized LOC100538212 [Source:NCBI gene;Acc:100538212]
34. CU694372.1 ENSDARG00000097988 105 0.986 - - - 0.986 - - - - -
35. CST7 CST7 22 0.986 - - - 0.986 - - - - -
36. cx28.8 ENSDARG00000071042 62 0.985 - - - 0.985 - - - - - connexin 28.8 [Source:ZFIN;Acc:ZDB-GENE-050616-1]
37. cyp2k18 ENSDARG00000104593 27 0.984 - - - 0.984 - - - - - cytochrome P450, family 2, subfamily K, polypeptide 18 [Source:ZFIN;Acc:ZDB-GENE-040426-1584]
38. CABZ01025393.1 CABZ01025393.1 37 0.981 - - - 0.981 - - - - -
39. ftr64 ENSDARG00000101514 33 0.98 - - - 0.980 - - - - - finTRIM family, member 64 [Source:ZFIN;Acc:ZDB-GENE-090508-8]
40. pigv ENSDARG00000101952 173 0.979 - - - 0.979 - - - - - phosphatidylinositol glycan anchor biosynthesis, class V [Source:ZFIN;Acc:ZDB-GENE-121116-1]
41. sec22bb ENSDARG00000100435 33 0.979 - - - 0.979 - - - - - SEC22 homolog B, vesicle trafficking protein b [Source:ZFIN;Acc:ZDB-GENE-030131-5488]
42. pus3 ENSDARG00000028976 52 0.979 - - - 0.979 - - - - - pseudouridylate synthase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9433]
43. ENKD1 ENSDARG00000043550 44 0.978 - - - 0.978 - - - - - enkurin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25246]
44. srd5a3 ENSDARG00000043307 142 0.977 - - - 0.977 - - - - - steroid 5 alpha-reductase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7915]
45. si:ch211-278j3.3 ENSDARG00000020284 478 0.976 - - - 0.976 - - - - - si:ch211-278j3.3 [Source:ZFIN;Acc:ZDB-GENE-041014-147]
46. asah1a ENSDARG00000037091, ENSDARG00000112187 390 0.975 - - - 0.975 - - - - - N-acylsphingosine amidohydrolase (acid ceramidase) 1a [Source:ZFIN;Acc:ZDB-GENE-041010-191]
47. rnmtl1b 116 0.974 - - - 0.974 - - - - - RNA methyltransferase like 1b
48. BEND2 BEND2 92 0.971 - - - 0.971 - - - - -
49. myh11a ENSDARG00000009782 80 0.969 - - - - - 0.969 - - - myosin, heavy chain 11a, smooth muscle [Source:ZFIN;Acc:ZDB-GENE-050531-1]
50. ENSDARG00000092910 ENSDARG00000092910 44 0.968 - - - 0.968 - - - - -
51. btr18 ENSDARG00000103618 39 0.966 - - - 0.966 - - - - - bloodthirsty-related gene family, member 18 [Source:ZFIN;Acc:ZDB-GENE-080213-2]
52. batf3 ENSDARG00000042577 34 0.966 - - - 0.966 - - - - - basic leucine zipper transcription factor, ATF-like 3 [Source:ZFIN;Acc:ZDB-GENE-041014-356]
53. si:ch211-106h11.3 ENSDARG00000027360 154 0.965 - - - 0.965 - - - - - si:ch211-106h11.3 [Source:ZFIN;Acc:ZDB-GENE-050208-296]
54. si:rp71-1i20.2 ENSDARG00000043198 113 0.965 - - - 0.965 - - - - - si:rp71-1i20.2 [Source:ZFIN;Acc:ZDB-GENE-040724-207]
55. C9H2orf40 C9H2orf40 212 0.965 - - - 0.965 - - - - -
56. tm9sf1 ENSDARG00000022970 113 0.964 - - - 0.964 - - - - - transmembrane 9 superfamily member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-64]
57. USP54 USP54 186 0.964 - - - 0.964 - - - - -
58. rasl10a ENSDARG00000062314 207 0.96 - - - 0.960 - - - - - RAS-like, family 10, member A [Source:ZFIN;Acc:ZDB-GENE-060526-273]
59. zgc:162936 ENSDARG00000069957 95 0.96 - - - 0.960 - - - - - zgc:162936 [Source:ZFIN;Acc:ZDB-GENE-030131-5253]
60. fgf24 ENSDARG00000037677 242 0.959 - - - 0.959 - - - - - fibroblast growth factor 24 [Source:ZFIN;Acc:ZDB-GENE-030708-1]
61. PAOX PAOX 251 0.958 - - - 0.958 - - - - -
62. GABRR1 ENSDARG00000043902 71 0.957 - - - 0.957 - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 1 [Source:ZFIN;Acc:ZDB-GENE-040724-212]
63. CR383676.3_1 CR383676.3_1 177 0.957 - - - 0.957 - - - - -
64. IP6K1 ENSDARG00000073744 524 0.956 - - - 0.956 - - - - - inositol hexakisphosphate kinase 1 [Source:ZFIN;Acc:ZDB-GENE-110317-2]
65. adarb1a ENSDARG00000041609 476 0.956 - - - 0.956 - - - - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
66. samd10a ENSDARG00000079978, ENSDARG00000112138 430 0.954 - - - 0.954 - - - - - sterile alpha motif domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-080204-53]
67. CR388046.3 ENSDARG00000105537 108 0.953 - - - 0.953 - - - - -
68. FAM26E FAM26E 79 0.953 - - - 0.953 - - - - -
69. nr1d4b ENSDARG00000059370 243 0.952 - - - 0.952 - - - - - nuclear receptor subfamily 1, group D, member 4b [Source:ZFIN;Acc:ZDB-GENE-080403-6]
70. si:dkey-183n20.2 si:dkey-183n20.2 210 0.951 - - - 0.951 - - - - -
71. CABZ01074309.1 CABZ01074309.1 121 0.95 - - - 0.950 - - - - -
72. si:dkey-287g12.6 ENSDARG00000096808 271 0.949 - - - 0.949 - - - - - si:dkey-287g12.6 [Source:ZFIN;Acc:ZDB-GENE-130603-36]
73. ugt2b6 ugt2b6 111 0.949 - - - 0.949 - - - - -
74. CR388132.2 ENSDARG00000104041 640 0.948 - - - 0.948 - - - - -
75. toporsb ENSDARG00000105028 1898 0.947 - - - 0.947 - - - - - topoisomerase I binding, arginine/serine-rich b [Source:ZFIN;Acc:ZDB-GENE-110728-3]
76. myo18ab ENSDARG00000061862 124 0.946 - - - 0.946 - - - - - myosin XVIIIAb [Source:ZFIN;Acc:ZDB-GENE-080423-1]
77. ascc2 ENSDARG00000013058 228 0.944 - - - 0.944 - - - - - activating signal cointegrator 1 complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1223]
78. pdik1l ENSDARG00000056509 548 0.94 - - - 0.940 - - - - - PDLIM1 interacting kinase 1 like [Source:ZFIN;Acc:ZDB-GENE-051113-236]
79. mettl21a ENSDARG00000012051 86 0.938 - - - 0.938 - - - - - methyltransferase like 21A [Source:ZFIN;Acc:ZDB-GENE-050320-145]
80. CU462878.1 ENSDARG00000090072 352 0.936 - - - 0.936 - - - - - keratinocyte associated protein 3 [Source:NCBI gene;Acc:100538219]
81. lzts1 ENSDARG00000075565 23 0.936 0.936 - - - - - - - - leucine zipper, putative tumor suppressor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-431]
82. ing1 ENSDARG00000019116 394 0.936 - - - 0.936 - - - - - inhibitor of growth family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060421-4388]
83. mtpap ENSDARG00000076155, ENSDARG00000112828 272 0.935 - 0.935 - - - - - - - mitochondrial poly(A) polymerase [Source:ZFIN;Acc:ZDB-GENE-101208-3]
84. CC2D1A 1262 0.933 - - - 0.933 - - - - - coiled-coil and C2 domain containing 1A, transcript variant X2
85. BX322608.1 ENSDARG00000111690 326 0.931 - 0.931 - - - - - - -
86. rasl12 ENSDARG00000002701 66 0.93 - - - 0.930 - - - - - RAS-like, family 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1201]
87. si:ch211-207c6.6 si:ch211-207c6.6 32 0.929 0.929 - - - - - - - -
88. BX897726.3 BX897726.3 220 0.929 - - - 0.929 - - - - -
89. si:ch73-127k6.1 si:ch73-127k6.1 114 0.927 - - - 0.927 - - - - -
90. tln2a ENSDARG00000017901, ENSDARG00000104934 222 0.927 - - - 0.927 - - - - - talin 2a [Source:ZFIN;Acc:ZDB-GENE-040724-263]
91. kdm8 ENSDARG00000102512 321 0.927 0.927 - - - - - - - - lysine (K)-specific demethylase 8 [Source:ZFIN;Acc:ZDB-GENE-040718-411]
92. rapgef4 ENSDARG00000079872 142 0.927 - - - 0.927 - - - - - Rap guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-385]
93. C21HXorf40A C21HXorf40A 216 0.923 - - - 0.923 - - - - -
94. ARSJ ENSDARG00000077590 684 0.922 - - - 0.922 - - - - - arylsulfatase family, member J [Source:ZFIN;Acc:ZDB-GENE-111215-1]
95. si:ch211-93f2.1 ENSDARG00000101726, ENSDARG00000104818 708 0.92 - - - 0.920 - - - - - si:ch211-93f2.1 [Source:ZFIN;Acc:ZDB-GENE-041014-96]
96. nap1l4a ENSDARG00000070560, ENSDARG00000113907 4244 0.918 - - - 0.918 - - - - - nucleosome assembly protein 1-like 4a [Source:ZFIN;Acc:ZDB-GENE-030131-9099]
97. si:ch73-257c13.2 ENSDARG00000074305 197 0.917 - - - 0.917 - - - - - si:ch73-257c13.2 [Source:ZFIN;Acc:ZDB-GENE-081104-269]
98. fadd ENSDARG00000103021 142 0.916 - - - 0.916 - - - - - Fas (tnfrsf6)-associated via death domain [Source:ZFIN;Acc:ZDB-GENE-070606-3]
99. si:ch211-165d12.4 ENSDARG00000079353 330 0.916 - - - - - 0.916 - - - si:ch211-165d12.4 [Source:ZFIN;Acc:ZDB-GENE-080303-7]
100. slc35b1_1 ENSDARG00000038213 194 0.916 - - - 0.916 - - - - - solute carrier family 35, member B1 [Source:ZFIN;Acc:ZDB-GENE-040912-148]

There are 1150 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA