Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lifra

Gene Name Gene ID Reads Annotation
lifra ENSDARG00000098857 11 leukemia inhibitory factor receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-050327-16]










Genes with expression patterns similar to lifra

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lifra ENSDARG00000098857 11 7 1.000 1.000 1.000 - 1.000 - 1.000 1.000 1.000 leukemia inhibitory factor receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-050327-16]
2. antxr1a ENSDARG00000025672 32 2.376 0.732 0.806 - - - - 0.838 - - ANTXR cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-110411-15]
3. cyp2p9 ENSDARG00000022631 1 2 - - - - 1.000 - - - 1.000 cytochrome P450, family 2, subfamily P, polypeptide 9 [Source:ZFIN;Acc:ZDB-GENE-040120-2]
4. CR774179.1 ENSDARG00000086969 3 2 - - - - 1.000 - - - 1.000
5. CABZ01059099.1 ENSDARG00000067927 1 2 - - - - 1.000 - - 1.000 - protein eva-1 homolog A-like [Source:NCBI gene;Acc:101882949]
6. FAM185A ENSDARG00000019142 3 2 - - - - 1.000 - - - 1.000 family with sequence similarity 185, member A [Source:ZFIN;Acc:ZDB-GENE-131121-241]
7. HIST1H4L ENSDARG00000101249, ENSDARG00000105318, ENSDARG00000105352, ENSDARG00000105353, ENSDARG00000105376, ENSDARG00000105382, ENSDARG00000105409, ENSDARG00000105482, ENSDARG00000110035, ENSDARG00000110152, ENSDARG00000110812, ENSDARG00000111165, ENSDARG00000111247, ENSDARG00000111494, ENSDARG00000111501, ENSDARG00000111619, ENSDARG00000111753, ENSDARG00000112491, ENSDARG00000112528, ENSDARG00000112954, ENSDARG00000114534, ENSDARG00000115054, ENSDARG00000115281, ENSDARG00000115799, ENSDARG00000116781 3 2 - - - - 1.000 - - 1.000 - histone 1, H4, like [Source:ZFIN;Acc:ZDB-GENE-070927-10]
8. cacng8a ENSDARG00000020450 32 2 1.000 - - - 1.000 - - - - calcium channel, voltage-dependent, gamma subunit 8a [Source:ZFIN;Acc:ZDB-GENE-050417-239]
9. si:ch211-171l17.14 ENSDARG00000100412, ENSDARG00000101388 4 2 - - - - - - - 1.000 1.000 si:ch211-171l17.14 [Source:ZFIN;Acc:ZDB-GENE-070912-153]
10. si:dkey-89j23.3 si:dkey-89j23.3 9 2 1.000 - - - 1.000 - - - -
11. slc44a5a ENSDARG00000017398 5 2 1.000 - - - 1.000 - - - - solute carrier family 44, member 5a [Source:ZFIN;Acc:ZDB-GENE-070705-333]
12. si:dkey-274m14.3 si:dkey-274m14.3 7 1.947 - - - - - - - 0.947 1.000
13. rrh ENSDARG00000039534 4 1.867 - - - - 1.000 - - - 0.867 retinal pigment epithelium-derived rhodopsin homolog [Source:ZFIN;Acc:ZDB-GENE-040912-94]
14. nid2b ENSDARG00000009471 4 1.838 - - - - 1.000 - 0.838 - - nidogen 2b (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-040724-143]
15. BX470224.1 ENSDARG00000092793 22 1.838 - - - - 1.000 - 0.838 - -
16. nphs1 ENSDARG00000060758 5 1.838 - - - - 1.000 - 0.838 - - nephrosis 1, congenital, Finnish type (nephrin) [Source:ZFIN;Acc:ZDB-GENE-051102-1]
17. BX548011.3 ENSDARG00000113526 2 1.838 - - - - 1.000 - 0.838 - -
18. RNF14 ENSDARG00000043905 41 1.806 - 0.806 - - - - 1.000 - - ring finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-040625-65]
19. TSPAN17 ENSDARG00000114067 3 1.806 - 0.806 - - - - - 1.000 - tetraspanin 17 [Source:ZFIN;Acc:ZDB-GENE-030131-3673]
20. TNFRSF14_8 TNFRSF14_8 6 1.806 - 0.806 - - 1.000 - - - -
21. hspbap1 ENSDARG00000033771 41 1.797 1.000 - - - - - 0.797 - - hspb associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040808-38]
22. si:dkey-7l6.3 ENSDARG00000094514 146 1.787 1.000 0.787 - - - - - - - si:dkey-7l6.3 [Source:ZFIN;Acc:ZDB-GENE-070912-586]
23. FJX1 ENSDARG00000035873 22 1.782 - 0.782 - - - - - - 1.000 four jointed box 1 [Source:ZFIN;Acc:ZDB-GENE-100422-10]
24. CABZ01070631.1 ENSDARG00000110183 6 1.767 1.000 - 0.767 - - - - - - F-BAR and double SH3 domains protein 2-like [Source:NCBI gene;Acc:100537850]
25. LAMB3 LAMB3 31 1.76 - 0.760 - - 1.000 - - - -
26. exoc4 ENSDARG00000004336 32 1.76 1.000 - - - - - 0.760 - - exocyst complex component 4 [Source:ZFIN;Acc:ZDB-GENE-041210-112]
27. pak1_1 ENSDARG00000103959 28 1.749 - 0.977 0.772 - - - - - - p21 protein (Cdc42/Rac)-activated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030826-29]
28. dnah9 ENSDARG00000103383 2 1.742 - - 0.742 - 1.000 - - - - dynein, axonemal, heavy chain 9 [Source:ZFIN;Acc:ZDB-GENE-020925-1]
29. CR356223.4 CR356223.4 42 1.732 1.000 - - - - - 0.732 - -
30. BX927369.1 ENSDARG00000105047 21 1.724 1.000 - - - - - 0.724 - -
31. si:ch211-136a13.1 ENSDARG00000060927 250 1.718 0.783 - - - - - 0.935 - - si:ch211-136a13.1 [Source:ZFIN;Acc:ZDB-GENE-050419-214]
32. aven ENSDARG00000002894 49 1.716 - 0.878 - - - - 0.838 - - apoptosis, caspase activation inhibitor [Source:ZFIN;Acc:ZDB-GENE-041001-171]
33. si:ch211-197g15.7 ENSDARG00000071355 26 1.649 0.823 - - - - - - 0.826 - si:ch211-197g15.7 [Source:ZFIN;Acc:ZDB-GENE-030131-4763]
34. ZNF135_5 ZNF135_5 73 1.626 - - - - - - 0.824 0.802 -
35. TBC1D10C ENSDARG00000037408 18 1.626 - - 0.820 - 0.806 - - - - TBC1 domain family, member 10C [Source:ZFIN;Acc:ZDB-GENE-130125-1]
36. pbx3b ENSDARG00000013615, ENSDARG00000110194 11 1.622 - 0.794 0.828 - - - - - - pre-B-cell leukemia homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-000405-3]
37. zgc:158320 ENSDARG00000099373 161 1.62 0.853 0.767 - - - - - - - zgc:158320 [Source:ZFIN;Acc:ZDB-GENE-061201-33]
38. zgc:171422 ENSDARG00000104715 255 1.61 0.744 - - - - - 0.866 - - zgc:171422 [Source:ZFIN;Acc:ZDB-GENE-080204-95]
39. acy3.1 ENSDARG00000093003 54 1.606 - 0.779 - - - - 0.827 - - aspartoacylase (aminocyclase) 3, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040718-345]
40. AL840631.3 AL840631.3 82 1.599 0.862 0.737 - - - - - - -
41. dcaf11 ENSDARG00000009868, ENSDARG00000113596 57 1.595 - 0.771 - - - - 0.824 - - ddb1 and cul4 associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-050809-116]
42. si:ch211-224l10.4 ENSDARG00000088762 36 1.592 - 0.806 - - - - 0.786 - - si:ch211-224l10.4 [Source:ZFIN;Acc:ZDB-GENE-090312-125]
43. n6amt2 7 1.591 - - - - 0.753 - 0.838 - - N-6 adenine-specific DNA methyltransferase 2 (putative), transcript variant X1
44. adrb3b ENSDARG00000052919 16 1.588 - 0.750 - - - - 0.838 - - adrenoceptor beta 3b [Source:ZFIN;Acc:ZDB-GENE-081022-154]
45. supt7l ENSDARG00000013461 41 1.554 - - 0.716 - - - 0.838 - - SPT7-like STAGA complex gamma subunit [Source:ZFIN;Acc:ZDB-GENE-050227-17]
46. nt5c1ba ENSDARG00000018153 31 1.534 - 0.783 0.751 - - - - - - 5'-nucleotidase, cytosolic IB a [Source:ZFIN;Acc:ZDB-GENE-070424-103]
47. slc8a2a ENSDARG00000008912, ENSDARG00000116797 12 1.52 - - 0.767 - - - 0.753 - - solute carrier family 8 (sodium/calcium exchanger), member 2a [Source:ZFIN;Acc:ZDB-GENE-060531-155]
48. tbpl2 ENSDARG00000097302 70 1.507 - 0.794 - - - - 0.713 - - TATA box binding protein like 2 [Source:ZFIN;Acc:ZDB-GENE-040520-3]
49. ppfia4 ENSDARG00000053205 276 1.506 0.743 0.763 - - - - - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 [Source:ZFIN;Acc:ZDB-GENE-070720-14]
50. CT737184.1 ENSDARG00000102726 0 1 - - - - - - - - 1.000
51. hhat ENSDARG00000074428 8 1 - - - - - - - - 1.000 hedgehog acyltransferase [Source:ZFIN;Acc:ZDB-GENE-051118-1]
52. ZBED1 ZBED1 2 1 - - - - 1.000 - - - -
53. gpc2 ENSDARG00000104217 10 1 - - - - 1.000 - - - - glypican 2 [Source:ZFIN;Acc:ZDB-GENE-050302-31]
54. ttc6 ENSDARG00000104125 7 1 - - - - - - - - 1.000 tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
55. grm2a ENSDARG00000004150 64 1 1.000 - - - - - - - - glutamate receptor, metabotropic 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8097]
56. ppid_1 ENSDARG00000038835 4 1 - - - - - - - - 1.000 peptidylprolyl isomerase D [Source:ZFIN;Acc:ZDB-GENE-040625-34]
57. si:dkey-149m13.2 si:dkey-149m13.2 1 1 - - - - - - - - 1.000
58. si:ch211-187f22.2 si:ch211-187f22.2 7 1 1.000 - - - - - - - -
59. si:dkey-282h22.5 ENSDARG00000092458 7 1 1.000 - - - - - - - - si:dkey-282h22.5 [Source:ZFIN;Acc:ZDB-GENE-091204-220]
60. zp2l1 ENSDARG00000055415, ENSDARG00000110573 2 1 - - - - 1.000 - - - - zona pellucida glycoprotein 2, like 1 [Source:ZFIN;Acc:ZDB-GENE-060818-3]
61. BX649394.1 BX649394.1 1 1 - - - - 1.000 - - - -
62. TRIM14_12 TRIM14_12 1 1 - - - - 1.000 - - - -
63. ppp1r37_1 ENSDARG00000078458 36 1 - - - - 1.000 - - - - protein phosphatase 1, regulatory subunit 37 [Source:ZFIN;Acc:ZDB-GENE-050208-7]
64. FANCA ENSDARG00000098241 39 1 1.000 - - - - - - - - FA complementation group A [Source:ZFIN;Acc:ZDB-GENE-060508-1]
65. si:dkey-44g23.9 si:dkey-44g23.9 1 1 - - - - 1.000 - - - -
66. gabbr1a ENSDARG00000018967 2 1 - - - - 1.000 - - - - gamma-aminobutyric acid (GABA) B receptor, 1a [Source:ZFIN;Acc:ZDB-GENE-030904-5]
67. LIX1 ENSDARG00000052154 9 1 - - - - - - - - 1.000 limb and CNS expressed 1 [Source:ZFIN;Acc:ZDB-GENE-060526-123]
68. si:ch211-120k19.3 si:ch211-120k19.3 5 1 - - - - 1.000 - - - -
69. SCARB2 SCARB2 24 1 1.000 - - - - - - - -
70. FAM46D FAM46D 0 1 - - - - - - - - 1.000
71. FP103003.1_1 FP103003.1_1 6 1 - - - - - - - - 1.000
72. sox11a ENSDARG00000077811 25 1 1.000 - - - - - - - - SRY (sex determining region Y)-box 11a [Source:ZFIN;Acc:ZDB-GENE-980526-395]
73. C25HXorf38_1 C25HXorf38_1 35 1 1.000 - - - - - - - -
74. DNAJC11 1 1 - - - - - - - - 1.000 DnaJ heat shock protein family (Hsp40) member C11
75. SEMA4F ENSDARG00000100308 1 1 - - - - - - - - 1.000 ssemaphorin 4F [Source:HGNC Symbol;Acc:HGNC:10734]
76. scn4aa ENSDARG00000098738, ENSDARG00000113568 5 1 - - - - 1.000 - - - - sodium channel, voltage-gated, type IV, alpha, a [Source:ZFIN;Acc:ZDB-GENE-051201-2]
77. si:dkeyp-20e4.9 si:dkeyp-20e4.9 3 1 - - - - 1.000 - - - -
78. CR394568.1 CR394568.1 0 1 - - - - - - - - 1.000
79. elovl4b ENSDARG00000027495 107 1 1.000 - - - - - - - - ELOVL fatty acid elongase 4b [Source:ZFIN;Acc:ZDB-GENE-030131-7672]
80. zgc:171750 ENSDARG00000078638 4 1 - - - - 1.000 - - - - zgc:171750 [Source:ZFIN;Acc:ZDB-GENE-071004-30]
81. si:dkey-93m18.5 si:dkey-93m18.5 2 1 - - - - - - - - 1.000
82. FAM13C FAM13C 1 1 - - - - 1.000 - - - -
83. CR759920.2 CR759920.2 1 1 - - - - 1.000 - - - -
84. zgc:194906 ENSDARG00000095773, ENSDARG00000115894 0 1 - - - - 1.000 - - - - zgc:194906 [Source:ZFIN;Acc:ZDB-GENE-080722-43]
85. slc18a2 ENSDARG00000015110, ENSDARG00000115207 6 1 - - - - - - - - 1.000 solute carrier family 18 (vesicular monoamine transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-080514-1]
86. mir138 19 1 1.000 - - - - - - - - microRNA 138
87. LRRC71 LRRC71 11 1 1.000 - - - - - - - -
88. BX511034.1_1 ENSDARG00000071629 0 1 - - - - - - - - 1.000
89. ARAP1 3 1 - - - - - - - - 1.000 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
90. si:dkey-262g12.2 si:dkey-262g12.2 9 1 1.000 - - - - - - - -
91. pde11a ENSDARG00000063732 1 1 - - - - 1.000 - - - - phosphodiesterase 11a [Source:ZFIN;Acc:ZDB-GENE-070912-207]
92. cx27.5 ENSDARG00000035553 12 1 - - - - - - - 1.000 - connexin 27.5 [Source:ZFIN;Acc:ZDB-GENE-010619-2]
93. SNORA63_2 SNORA63_2 6 1 1.000 - - - - - - - -
94. si:ch211-197g22.1 si:ch211-197g22.1 1 1 - - - - - - - - 1.000
95. htr1b ENSDARG00000053987 11 1 1.000 - - - - - - - - 5-hydroxytryptamine (serotonin) receptor 1B [Source:ZFIN;Acc:ZDB-GENE-081022-141]
96. kif16bb ENSDARG00000080018 1 1 - - - - - - - 1.000 - kinesin family member 16Bb [Source:ZFIN;Acc:ZDB-GENE-070424-241]
97. CABZ01079258.1 CABZ01079258.1 3 1 - - - - 1.000 - - - -
98. TMEM245 ENSDARG00000070455 85 1 1.000 - - - - - - - - transmembrane protein 245 [Source:ZFIN;Acc:ZDB-GENE-100922-188]
99. BX510935.2 BX510935.2 1 1 - - - - - - - 1.000 -
100. GPT GPT 2 1 - - - - - - - - 1.000

There are 1226 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA