Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for lhx6

Gene Name Gene ID Reads Annotation
lhx6 ENSDARG00000006896, ENSDARG00000112520 98 LIM homeobox 6 [Source:ZFIN;Acc:ZDB-GENE-041025-1]










Genes with expression patterns similar to lhx6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lhx6 ENSDARG00000006896, ENSDARG00000112520 98 7 - 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 LIM homeobox 6 [Source:ZFIN;Acc:ZDB-GENE-041025-1]
2. spo11 ENSDARG00000013837 7 2 - 1.000 - - - - 1.000 - - SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
3. kcnc1b ENSDARG00000032959, ENSDARG00000113595 36 1.95 - 1.000 - 0.950 - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 1b [Source:ZFIN;Acc:ZDB-GENE-080414-3]
4. sox17 ENSDARG00000101717 11 1.883 - - - 0.883 - - 1.000 - - SRY (sex determining region Y)-box 17 [Source:ZFIN;Acc:ZDB-GENE-991213-1]
5. CR942805.1 CR942805.1 94 1.815 - 0.815 - - - - 1.000 - -
6. BX465841.1 BX465841.1 47 1.747 - 0.906 0.841 - - - - - -
7. SUSD3 SUSD3 64 1.714 - - - 0.929 - - 0.785 - -
8. eng2a eng2a 186 1.667 - 0.829 - - - - - 0.838 -
9. BRSK2 BRSK2 66 1.663 - - - - - - 0.849 0.814 -
10. ttll12 ENSDARG00000103537 364 1.528 - 0.733 0.795 - - - - - - tubulin tyrosine ligase-like family, member 12 [Source:ZFIN;Acc:ZDB-GENE-040426-697]
11. CR855306.1 ENSDARG00000099475 102 1.518 - 0.732 0.786 - - - - - -
12. hyal3 ENSDARG00000036818 23 1 - - - - - - 1.000 - - hyaluronoglucosaminidase 3 [Source:ZFIN;Acc:ZDB-GENE-081104-366]
13. aftphb ENSDARG00000071347 161 1 - 1.000 - - - - - - - aftiphilin b [Source:ZFIN;Acc:ZDB-GENE-060503-388]
14. si:ch73-44m9.1 ENSDARG00000077115 3 1 - 1.000 - - - - - - - si:ch73-44m9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-289]
15. slc18b1 ENSDARG00000044047 7 1 - - - - - - 1.000 - - solute carrier family 18, subfamily B, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-386]
16. asic2 ENSDARG00000006849 18 1 - 1.000 - - - - - - - acid-sensing (proton-gated) ion channel 2 [Source:ZFIN;Acc:ZDB-GENE-040513-4]
17. si:dkey-94f20.4 ENSDARG00000016923 2 1 - - - - - - 1.000 - - si:dkey-94f20.4 [Source:ZFIN;Acc:ZDB-GENE-121214-276]
18. ugt5e1 ENSDARG00000058048 25 1 - 1.000 - - - - - - - UDP glucuronosyltransferase 5 family, polypeptide E1 [Source:ZFIN;Acc:ZDB-GENE-081105-106]
19. ODF3L2 40 1 - 1.000 - - - - - - - outer dense fiber of sperm tails 3-like 2
20. CABZ01073112.1 CABZ01073112.1 40 1 - - - - - - 1.000 - -
21. moxd1l ENSDARG00000069296, ENSDARG00000115126 2 1 - - - - - - 1.000 - - monooxygenase, DBH-like 1, like [Source:ZFIN;Acc:ZDB-GENE-060126-3]
22. DIP2B DIP2B 18 1 - - - - - - 1.000 - -
23. evi5b ENSDARG00000070839 239 1 - 1.000 - - - - - - - ecotropic viral integration site 5b [Source:ZFIN;Acc:ZDB-GENE-041111-244]
24. ENSDARG00000074422 ENSDARG00000074422 61 1 - - - - - - 1.000 - -
25. zp3a.1 ENSDARG00000042129 18 1 - 1.000 - - - - - - - zona pellucida glycoprotein 3a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040727-1]
26. ncf2 ENSDARG00000005821 28 1 - - - - - - 1.000 - - neutrophil cytosolic factor 2 [Source:ZFIN;Acc:ZDB-GENE-070209-29]
27. CABZ01080434.1 ENSDARG00000102438 4 1 - - - - - - 1.000 - -
28. CABZ01090975.1 CABZ01090975.1 9 1 - - - - - - 1.000 - -
29. si:dkey-85n7.11 si:dkey-85n7.11 2 1 - 1.000 - - - - - - -
30. CR762484.2 CR762484.2 42 1 - 1.000 - - - - - - -
31. SNORD83 SNORD83 43 1 - 1.000 - - - - - - -
32. si:ch211-223f7.1 si:ch211-223f7.1 38 1 - 1.000 - - - - - - -
33. arr3a ENSDARG00000056511, ENSDARG00000114648 192 1 - - - - - - 1.000 - - arrestin 3a, retinal (X-arrestin) [Source:ZFIN;Acc:ZDB-GENE-040718-102]
34. CU302326.2 CU302326.2 54 1 - 1.000 - - - - - - -
35. GPR78 GPR78 17 1 - - - - - - 1.000 - -
36. camk1ga ENSDARG00000044526 5 1 - - - - - - 1.000 - - calcium/calmodulin-dependent protein kinase IGa [Source:ZFIN;Acc:ZDB-GENE-030131-7594]
37. CU469532.1 CU469532.1 31 1 - - - - - - 1.000 - -
38. CR457462.1 CR457462.1 11 1 - - - - - - 1.000 - -
39. TMPRSS7 5 1 - 1.000 - - - - - - - transmembrane protease, serine 7
40. FAM183B FAM183B 25 1 - 1.000 - - - - - - -
41. si:ch211-113a14.14_3 si:ch211-113a14.14_3 21 1 - 1.000 - - - - - - -
42. EGR4_1 EGR4_1 14 1 - 1.000 - - - - - - -
43. CU861664.1 CU861664.1 53 1 - - - - - - 1.000 - -
44. zgc:171501 ENSDARG00000075375 11 1 - 1.000 - - - - - - - zgc:171501 [Source:ZFIN;Acc:ZDB-GENE-080204-10]
45. BX682234.3 BX682234.3 7 1 - - - - - - 1.000 - -
46. si:ch211-238g23.1 ENSDARG00000055746 23 1 - - - - - - 1.000 - - si:ch211-238g23.1 [Source:ZFIN;Acc:ZDB-GENE-050420-173]
47. si:dkey-16i5.8 ENSDARG00000096722 1 1 - 1.000 - - - - - - - si:dkey-16i5.8 [Source:ZFIN;Acc:ZDB-GENE-030131-1207]
48. si:dkeyp-4f2.3 ENSDARG00000096011, ENSDARG00000104584 5 1 - - - - - - 1.000 - - si:dkeyp-4f2.3 [Source:ZFIN;Acc:ZDB-GENE-110914-117]
49. si:dkey-15h19.3 si:dkey-15h19.3 5 1 - 1.000 - - - - - - -
50. si:dkey-46c2.2 si:dkey-46c2.2 2 1 - 1.000 - - - - - - -
51. ADTRP ADTRP 2 1 - 1.000 - - - - - - -
52. RAB3IL1 ENSDARG00000007711 11 1 - - - - - - 1.000 - - RAB3A interacting protein (rabin3)-like 1 [Source:ZFIN;Acc:ZDB-GENE-110921-5]
53. rictora ENSDARG00000100867 20 1 - 1.000 - - - - - - - RPTOR independent companion of MTOR, complex 2 a [Source:ZFIN;Acc:ZDB-GENE-060526-49]
54. zgc:172282 ENSDARG00000105059 64 1 - 1.000 - - - - - - - zgc:172282 [Source:ZFIN;Acc:ZDB-GENE-080219-38]
55. FASN ENSDARG00000087657 18 1 - 1.000 - - - - - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
56. C24H8orf34 C24H8orf34 1 1 - - - - - - 1.000 - -
57. si:ch211-103a14.1 si:ch211-103a14.1 1 1 - 1.000 - - - - - - -
58. cx50.5 cx50.5 15 1 - 1.000 - - - - - - -
59. serpinb1l2 ENSDARG00000070396 37 1 - 1.000 - - - - - - - serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 2 [Source:ZFIN;Acc:ZDB-GENE-041001-117]
60. ROCK2 ROCK2 8 1 - 1.000 - - - - - - -
61. HTRA2_6 HTRA2_6 0 1 - - - - - - 1.000 - -
62. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 1 - - - - - - 1.000 - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
63. ifit5 ifit5 12 1 - - - - - - 1.000 - -
64. ENSDARG00000091099 ENSDARG00000091099 5 1 - - - - - - 1.000 - -
65. sumo2a ENSDARG00000104390 4 1 - 1.000 - - - - - - - small ubiquitin-like modifier 2a [Source:ZFIN;Acc:ZDB-GENE-120215-155]
66. megf8 ENSDARG00000079751, ENSDARG00000103934 1 1 - 1.000 - - - - - - - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
67. TRHDE TRHDE 1 1 - - - - - - 1.000 - -
68. AL929453.1 ENSDARG00000115950 31 1 - 1.000 - - - - - - -
69. neurod2 ENSDARG00000016854 6 1 - 1.000 - - - - - - - neurogenic differentiation 2 [Source:ZFIN;Acc:ZDB-GENE-010608-3]
70. ptk2.2 ptk2.2 3 1 - 1.000 - - - - - - -
71. BX004980.1 ENSDARG00000099680 10 1 - 1.000 - - - - - - -
72. fam219b ENSDARG00000104637 3 1 - - - - - - 1.000 - - family with sequence similarity 219, member B [Source:ZFIN;Acc:ZDB-GENE-050327-82]
73. si:dkey-25i10.5 si:dkey-25i10.5 18 1 - 1.000 - - - - - - -
74. si:dkey-148b12.4 si:dkey-148b12.4 2 1 - - - - - - 1.000 - -
75. cnnm4 cnnm4 2 1 - 1.000 - - - - - - -
76. si:ch211-229i14.2 ENSDARG00000086048 19 1 - 1.000 - - - - - - - si:ch211-229i14.2 [Source:ZFIN;Acc:ZDB-GENE-070705-123]
77. VWDE_1 VWDE_1 2 1 - - - - - - 1.000 - -
78. dnaaf3 ENSDARG00000092662 20 1 - 1.000 - - - - - - - dynein, axonemal, assembly factor 3 [Source:ZFIN;Acc:ZDB-GENE-091204-296]
79. fam45a ENSDARG00000062965, ENSDARG00000115900 14 1 - 1.000 - - - - - - - family with sequence similarity 45, member A [Source:ZFIN;Acc:ZDB-GENE-030131-3548]
80. CABZ01030033.1 ENSDARG00000117613 3 1 - - - - - - 1.000 - -
81. dgkza ENSDARG00000014439 82 1 - - - - - - 1.000 - - diacylglycerol kinase, zeta a [Source:ZFIN;Acc:ZDB-GENE-111104-3]
82. Metazoa_SRP_19 Metazoa_SRP_19 17 1 - 1.000 - - - - - - -
83. si:ch211-196n4.9 si:ch211-196n4.9 1 1 - 1.000 - - - - - - -
84. si:dkey-7i4.1 ENSDARG00000086897 2 1 - 1.000 - - - - - - - si:dkey-7i4.1 [Source:ZFIN;Acc:ZDB-GENE-081028-64]
85. CABZ01066695.1 CABZ01066695.1 12 1 - - - - - - 1.000 - -
86. si:ch211-253d24.2 si:ch211-253d24.2 12 1 - 1.000 - - - - - - -
87. si:ch211-117m20.4 ENSDARG00000094286 7 1 - 1.000 - - - - - - - si:ch211-117m20.4 [Source:ZFIN;Acc:ZDB-GENE-060526-20]
88. zgc:172053 ENSDARG00000038321 9 1 - - - - - - 1.000 - - zgc:172053 [Source:ZFIN;Acc:ZDB-GENE-080219-25]
89. BX957311.1 ENSDARG00000097710 1 1 - 1.000 - - - - - - -
90. slc35f3a ENSDARG00000075909 1 1 - 1.000 - - - - - - - solute carrier family 35, member F3a [Source:ZFIN;Acc:ZDB-GENE-080204-20]
91. ebi3 ENSDARG00000053620 5 1 - 1.000 - - - - - - - Epstein-Barr virus induced 3 [Source:ZFIN;Acc:ZDB-GENE-070912-615]
92. st3gal1l ENSDARG00000079310 10 1 - 1.000 - - - - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-060321-2]
93. creb5b ENSDARG00000070536 9 1 - 1.000 - - - - - - - cAMP responsive element binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-091020-6]
94. wdr4 ENSDARG00000090581 42 1 - - - - - - 1.000 - - WD repeat domain 4 [Source:ZFIN;Acc:ZDB-GENE-060810-10]
95. si:dkey-176g1.4 si:dkey-176g1.4 1 1 - 1.000 - - - - - - -
96. si:ch211-151h10.2 ENSDARG00000068250 14 1 - 1.000 - - - - - - - si:ch211-151h10.2 [Source:ZFIN;Acc:ZDB-GENE-050419-29]
97. si:dkey-20i20.12 si:dkey-20i20.12 7 1 - 1.000 - - - - - - -
98. dapp1 ENSDARG00000039535 23 1 - 1.000 - - - - - - - dual adaptor of phosphotyrosine and 3-phosphoinositides [Source:ZFIN;Acc:ZDB-GENE-050417-180]
99. anks4b ENSDARG00000036846 8 1 - 1.000 - - - - - - - ankyrin repeat and sterile alpha motif domain containing 4B [Source:ZFIN;Acc:ZDB-GENE-040704-29]
100. CA4 CA4 1 1 - 1.000 - - - - - - -

There are 727 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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