Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Limit to:

Results for lhx6

Gene Name Gene ID Reads Annotation
lhx6 ENSDARG00000006896, ENSDARG00000112520 98 LIM homeobox 6 [Source:ZFIN;Acc:ZDB-GENE-041025-1]










Genes with expression patterns similar to lhx6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lhx6 ENSDARG00000006896, ENSDARG00000112520 98 7 - 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 LIM homeobox 6 [Source:ZFIN;Acc:ZDB-GENE-041025-1]
2. spo11 ENSDARG00000013837 7 2 - 1.000 - - - - 1.000 - - SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
3. kcnc1b ENSDARG00000032959, ENSDARG00000113595 36 1.95 - 1.000 - 0.950 - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 1b [Source:ZFIN;Acc:ZDB-GENE-080414-3]
4. sox17 ENSDARG00000101717 11 1.883 - - - 0.883 - - 1.000 - - SRY (sex determining region Y)-box 17 [Source:ZFIN;Acc:ZDB-GENE-991213-1]
5. CR942805.1 CR942805.1 94 1.815 - 0.815 - - - - 1.000 - -
6. BX465841.1 BX465841.1 47 1.747 - 0.906 0.841 - - - - - -
7. SUSD3 SUSD3 64 1.714 - - - 0.929 - - 0.785 - -
8. eng2a eng2a 186 1.667 - 0.829 - - - - - 0.838 -
9. BRSK2 BRSK2 66 1.663 - - - - - - 0.849 0.814 -
10. ttll12 ENSDARG00000103537 364 1.528 - 0.733 0.795 - - - - - - tubulin tyrosine ligase-like family, member 12 [Source:ZFIN;Acc:ZDB-GENE-040426-697]
11. CR855306.1 ENSDARG00000099475 102 1.518 - 0.732 0.786 - - - - - -
12. zgc:171501 ENSDARG00000075375 11 1 - 1.000 - - - - - - - zgc:171501 [Source:ZFIN;Acc:ZDB-GENE-080204-10]
13. slc18b1 ENSDARG00000044047 7 1 - - - - - - 1.000 - - solute carrier family 18, subfamily B, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-386]
14. bgna ENSDARG00000017884 9 1 - 1.000 - - - - - - - biglycan a [Source:ZFIN;Acc:ZDB-GENE-040704-74]
15. CABZ01048549.1 CABZ01048549.1 1 1 - - - - - - 1.000 - -
16. si:ch211-238g23.1 ENSDARG00000055746 23 1 - - - - - - 1.000 - - si:ch211-238g23.1 [Source:ZFIN;Acc:ZDB-GENE-050420-173]
17. si:ch211-163f10.4 si:ch211-163f10.4 1 1 - - - - - - 1.000 - -
18. slc35f3a ENSDARG00000075909 1 1 - 1.000 - - - - - - - solute carrier family 35, member F3a [Source:ZFIN;Acc:ZDB-GENE-080204-20]
19. zgc:172053 ENSDARG00000038321 9 1 - - - - - - 1.000 - - zgc:172053 [Source:ZFIN;Acc:ZDB-GENE-080219-25]
20. tmc1 23 1 - 1.000 - - - - - - - transmembrane channel-like 1, transcript variant X1
21. fmn2b ENSDARG00000061778 179 1 - 1.000 - - - - - - - formin 2b [Source:ZFIN;Acc:ZDB-GENE-080225-35]
22. ripply2 ENSDARG00000070535 18 1 - - - - - - 1.000 - - ripply transcriptional repressor 2 [Source:ZFIN;Acc:ZDB-GENE-060113-2]
23. evi5b ENSDARG00000070839 239 1 - 1.000 - - - - - - - ecotropic viral integration site 5b [Source:ZFIN;Acc:ZDB-GENE-041111-244]
24. si:ch211-120e1.7 ENSDARG00000094634 14 1 - - - - - - 1.000 - - si:ch211-120e1.7 [Source:ZFIN;Acc:ZDB-GENE-070424-119]
25. si:ch73-381a20.2 si:ch73-381a20.2 11 1 - 1.000 - - - - - - -
26. ptk2.2 ptk2.2 3 1 - 1.000 - - - - - - -
27. si:ch211-113a14.14_3 si:ch211-113a14.14_3 21 1 - 1.000 - - - - - - -
28. si:dkey-222f2.1 ENSDARG00000043242 192 1 - 1.000 - - - - - - - si:dkey-222f2.1 [Source:ZFIN;Acc:ZDB-GENE-050208-726]
29. ugt2b5 ugt2b5 17 1 - 1.000 - - - - - - -
30. map2k4a ENSDARG00000063583 38 1 - - - - - - 1.000 - - mitogen-activated protein kinase kinase 4a [Source:ZFIN;Acc:ZDB-GENE-060512-98]
31. si:ch211-140o17.1 si:ch211-140o17.1 0 1 - - - - - - 1.000 - -
32. si:dkeyp-3f10.12 ENSDARG00000105791 3 1 - 1.000 - - - - - - - si:dkeyp-3f10.12 [Source:ZFIN;Acc:ZDB-GENE-081104-20]
33. USP53 USP53 5 1 - 1.000 - - - - - - -
34. mxe ENSDARG00000014427 6 1 - 1.000 - - - - - - - myxovirus (influenza virus) resistance E [Source:ZFIN;Acc:ZDB-GENE-030131-9609]
35. acta2 ENSDARG00000045180 96 1 - - - - - - 1.000 - - actin, alpha 2, smooth muscle, aorta [Source:ZFIN;Acc:ZDB-GENE-030131-1229]
36. si:dkey-277m11.2 ENSDARG00000094879 15 1 - 1.000 - - - - - - - si:dkey-277m11.2 [Source:ZFIN;Acc:ZDB-GENE-060526-285]
37. PPP1R16A ENSDARG00000076980 40 1 - 1.000 - - - - - - - protein phosphatase 1, regulatory subunit 16A [Source:ZFIN;Acc:ZDB-GENE-121214-252]
38. asic2 ENSDARG00000006849 18 1 - 1.000 - - - - - - - acid-sensing (proton-gated) ion channel 2 [Source:ZFIN;Acc:ZDB-GENE-040513-4]
39. lsm14b ENSDARG00000025386 23 1 - 1.000 - - - - - - - LSM family member 14B [Source:ZFIN;Acc:ZDB-GENE-040426-779]
40. CA4 CA4 1 1 - 1.000 - - - - - - -
41. purg ENSDARG00000099187, ENSDARG00000114450 33 1 - - - - - - 1.000 - - purine-rich element binding protein G [Source:ZFIN;Acc:ZDB-GENE-070702-3]
42. ENSDARG00000088164 ENSDARG00000088164 59 1 - 1.000 - - - - - - -
43. CR854923.1 CR854923.1 18 1 - 1.000 - - - - - - -
44. anks4b ENSDARG00000036846 8 1 - 1.000 - - - - - - - ankyrin repeat and sterile alpha motif domain containing 4B [Source:ZFIN;Acc:ZDB-GENE-040704-29]
45. atp8b3 ENSDARG00000042285 31 1 - 1.000 - - - - - - - ATPase phospholipid transporting 8B3 [Source:ZFIN;Acc:ZDB-GENE-050208-424]
46. svilb_1 ENSDARG00000014651 60 1 - 1.000 - - - - - - - supervillin b [Source:ZFIN;Acc:ZDB-GENE-081104-411]
47. si:ch211-151h10.2 ENSDARG00000068250 14 1 - 1.000 - - - - - - - si:ch211-151h10.2 [Source:ZFIN;Acc:ZDB-GENE-050419-29]
48. F13A1 F13A1 1 1 - 1.000 - - - - - - -
49. SNORA81_1 SNORA81_1 8 1 - - - - - - 1.000 - -
50. GPR78 GPR78 17 1 - - - - - - 1.000 - -
51. AL929453.1 ENSDARG00000115950 31 1 - 1.000 - - - - - - -
52. si:dkey-102f14.7 ENSDARG00000092255 1 1 - - - - - - 1.000 - - si:dkey-102f14.7 [Source:ZFIN;Acc:ZDB-GENE-060503-895]
53. CABZ01066695.1 CABZ01066695.1 12 1 - - - - - - 1.000 - -
54. si:dkey-15h19.3 si:dkey-15h19.3 5 1 - 1.000 - - - - - - -
55. BX004980.1 ENSDARG00000099680 10 1 - 1.000 - - - - - - -
56. aftphb ENSDARG00000071347 161 1 - 1.000 - - - - - - - aftiphilin b [Source:ZFIN;Acc:ZDB-GENE-060503-388]
57. dapp1 ENSDARG00000039535 23 1 - 1.000 - - - - - - - dual adaptor of phosphotyrosine and 3-phosphoinositides [Source:ZFIN;Acc:ZDB-GENE-050417-180]
58. im:7136021 ENSDARG00000054128 79 1 - 1.000 - - - - - - - im:7136021 [Source:ZFIN;Acc:ZDB-GENE-041008-74]
59. pcolce2a ENSDARG00000008450 22 1 - 1.000 - - - - - - - procollagen C-endopeptidase enhancer 2a [Source:ZFIN;Acc:ZDB-GENE-070705-25]
60. ODF3L2 40 1 - 1.000 - - - - - - - outer dense fiber of sperm tails 3-like 2
61. BX682234.1 ENSDARG00000074732 5 1 - - - - - - 1.000 - - C-type lectin domain family 12 member B-like [Source:NCBI gene;Acc:101882781]
62. si:ch211-145h19.1 31 1 - 1.000 - - - - - - - si:ch211-145h19.1
63. EFEMP1 32 1 - 1.000 - - - - - - - EGF containing fibulin-like extracellular matrix protein 1, transcript variant X1
64. RAB3IL1 ENSDARG00000007711 11 1 - - - - - - 1.000 - - RAB3A interacting protein (rabin3)-like 1 [Source:ZFIN;Acc:ZDB-GENE-110921-5]
65. wu:fi26e04 wu:fi26e04 15 1 - - - - - - 1.000 - -
66. si:ch211-113a14.15_1 2 1 - - - - - - 1.000 - - si:ch211-113a14.15
67. fgf10b ENSDARG00000100475 17 1 - 1.000 - - - - - - - fibroblast growth factor 10b [Source:ZFIN;Acc:ZDB-GENE-060828-1]
68. VWDE_1 VWDE_1 2 1 - - - - - - 1.000 - -
69. TRHDE TRHDE 1 1 - - - - - - 1.000 - -
70. RP1L1 RP1L1 15 1 - 1.000 - - - - - - -
71. si:ch211-119c24.1 si:ch211-119c24.1 17 1 - 1.000 - - - - - - -
72. si:dkeyp-4f2.3 ENSDARG00000096011, ENSDARG00000104584 5 1 - - - - - - 1.000 - - si:dkeyp-4f2.3 [Source:ZFIN;Acc:ZDB-GENE-110914-117]
73. ROCK2 ROCK2 8 1 - 1.000 - - - - - - -
74. olfml2bb ENSDARG00000021480 256 1 - 1.000 - - - - - - - olfactomedin-like 2Bb [Source:ZFIN;Acc:ZDB-GENE-070912-266]
75. sh2d3cb ENSDARG00000104555, ENSDARG00000116530 21 1 - 1.000 - - - - - - - SH2 domain containing 3Cb [Source:ZFIN;Acc:ZDB-GENE-040426-1052]
76. CU302326.2 CU302326.2 54 1 - 1.000 - - - - - - -
77. si:ch211-253d24.2 si:ch211-253d24.2 12 1 - 1.000 - - - - - - -
78. dgkza ENSDARG00000014439 82 1 - - - - - - 1.000 - - diacylglycerol kinase, zeta a [Source:ZFIN;Acc:ZDB-GENE-111104-3]
79. si:ch211-134d5.3 si:ch211-134d5.3 1 1 - 1.000 - - - - - - -
80. Metazoa_SRP_19 Metazoa_SRP_19 17 1 - 1.000 - - - - - - -
81. TRIM14_3 TRIM14_3 7 1 - - - - - - 1.000 - -
82. si:ch211-113a14.14_1 si:ch211-113a14.14_1 7 1 - 1.000 - - - - - - -
83. atn1 ENSDARG00000092067 257 1 - 1.000 - - - - - - - atrophin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-426]
84. ifit5 ifit5 12 1 - - - - - - 1.000 - -
85. QSOX2 ENSDARG00000077174 26 1 - 1.000 - - - - - - - quiescin Q6 sulfhydryl oxidase 2 [Source:ZFIN;Acc:ZDB-GENE-110203-4]
86. si:dkey-94f20.4 ENSDARG00000016923 2 1 - - - - - - 1.000 - - si:dkey-94f20.4 [Source:ZFIN;Acc:ZDB-GENE-121214-276]
87. CLDND1_1 CLDND1_1 50 1 - 1.000 - - - - - - -
88. neurod2 ENSDARG00000016854 6 1 - 1.000 - - - - - - - neurogenic differentiation 2 [Source:ZFIN;Acc:ZDB-GENE-010608-3]
89. sumo2a ENSDARG00000104390 4 1 - 1.000 - - - - - - - small ubiquitin-like modifier 2a [Source:ZFIN;Acc:ZDB-GENE-120215-155]
90. cnnm4 cnnm4 2 1 - 1.000 - - - - - - -
91. zgc:171544 zgc:171544 11 1 - 1.000 - - - - - - -
92. CR457462.1 CR457462.1 11 1 - - - - - - 1.000 - -
93. ABR ENSDARG00000095180 4 1 - 1.000 - - - - - - - ABR, RhoGEF and GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-070705-146]
94. foxi1 ENSDARG00000104566 176 1 - - - - - - 1.000 - - forkhead box i1 [Source:ZFIN;Acc:ZDB-GENE-030505-1]
95. oxgr1a.1 ENSDARG00000033684 24 1 - 1.000 - - - - - - - oxoglutarate (alpha-ketoglutarate) receptor 1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-060421-6734]
96. si:dkey-7i4.1 ENSDARG00000086897 2 1 - 1.000 - - - - - - - si:dkey-7i4.1 [Source:ZFIN;Acc:ZDB-GENE-081028-64]
97. si:ch211-79g12.1 ENSDARG00000116692 2 1 - 1.000 - - - - - - - si:ch211-79g12.1 [Source:ZFIN;Acc:ZDB-GENE-110914-69]
98. slc8a2a ENSDARG00000008912, ENSDARG00000116797 12 1 - 1.000 - - - - - - - solute carrier family 8 (sodium/calcium exchanger), member 2a [Source:ZFIN;Acc:ZDB-GENE-060531-155]
99. creb5b ENSDARG00000070536 9 1 - 1.000 - - - - - - - cAMP responsive element binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-091020-6]
100. PEG3_17 PEG3_17 15 1 - - - - - - 1.000 - -

There are 727 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA