Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for lhx2b

Gene Name Gene ID Reads Annotation
lhx2b ENSDARG00000031222 517 LIM homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-051220-1]










Genes with expression patterns similar to lhx2b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lhx2b ENSDARG00000031222 517 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 LIM homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-051220-1]
2. BX324132.5 BX324132.5 115 3.082 - - 0.715 0.718 0.892 - - - 0.757
3. nr2e1 ENSDARG00000017107 340 2.68 - - 0.870 - 0.908 - - 0.902 - nuclear receptor subfamily 2, group E, member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-127]
4. six3a ENSDARG00000058008, ENSDARG00000114971 586 2.539 - - 0.855 0.776 - - - 0.908 - SIX homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-990415-127]
5. fezf2 ENSDARG00000070677 224 2.451 - - 0.877 - 0.868 - - - 0.706 FEZ family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-001103-3]
6. foxg1a ENSDARG00000070769 928 2.448 - - 0.875 0.753 0.820 - - - - forkhead box G1a [Source:ZFIN;Acc:ZDB-GENE-990415-267]
7. vax2 ENSDARG00000058702 175 2.442 - - 0.912 0.716 0.814 - - - - ventral anterior homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030904-8]
8. fezf1 ENSDARG00000010270 379 2.412 - - 0.884 0.711 0.817 - - - - FEZ family zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-060929-970]
9. si:dkey-235h8.1 si:dkey-235h8.1 2457 2.379 - - 0.926 - 0.724 - - 0.729 -
10. rorb ENSDARG00000033498 544 2.28 - - 0.707 0.822 - - 0.751 - - RAR-related orphan receptor B [Source:ZFIN;Acc:ZDB-GENE-061204-2]
11. vezf1a ENSDARG00000008247 1449 2.24 - - - 0.739 - - - 0.798 0.703 vascular endothelial zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-040108-4]
12. negr1 ENSDARG00000021607 1051 2.227 - - - 0.730 - - - 0.789 0.708 neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
13. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 2.227 - - 0.718 0.735 0.774 - - - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
14. rln1 ENSDARG00000103762 8 1.795 - - - - - 0.799 0.996 - - relaxin 1 [Source:ZFIN;Acc:ZDB-GENE-120215-201]
15. map1lc3c ENSDARG00000100528 31 1.777 - - - - - 0.787 0.990 - - microtubule-associated protein 1 light chain 3 gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1080]
16. dlx1a ENSDARG00000013125 142 1.776 - - 0.858 - 0.918 - - - - distal-less homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-990415-48]
17. utp3 ENSDARG00000056720 922 1.707 - - - - - - 0.942 0.765 - UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-163]
18. celf4 ENSDARG00000070045 1537 1.706 - - 0.871 - 0.835 - - - - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
19. wnt7bb ENSDARG00000071107 1158 1.668 - - - - - 0.768 0.900 - - wingless-type MMTV integration site family, member 7Bb [Source:ZFIN;Acc:ZDB-GENE-081006-1]
20. nfia ENSDARG00000062420 573 1.656 - - 0.804 - - - - 0.852 - nuclear factor I/A [Source:ZFIN;Acc:ZDB-GENE-050208-501]
21. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 1.654 - - 0.760 - - - - 0.894 - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
22. amer2 ENSDARG00000075222 594 1.647 - - - 0.762 - - - 0.885 - APC membrane recruitment protein 2 [Source:ZFIN;Acc:ZDB-GENE-070719-5]
23. cnp ENSDARG00000070822 649 1.644 - - - - - 0.837 0.807 - - 2',3'-cyclic nucleotide 3' phosphodiesterase [Source:ZFIN;Acc:ZDB-GENE-030521-29]
24. slc1a3b ENSDARG00000043148 431 1.644 - - 0.830 - - - - - 0.814 solute carrier family 1 (glial high affinity glutamate transporter), member 3b [Source:ZFIN;Acc:ZDB-GENE-090708-3]
25. syt5b ENSDARG00000011640 70 1.643 - - - - - 0.799 0.844 - - synaptotagmin Vb [Source:ZFIN;Acc:ZDB-GENE-050522-134]
26. syt1a ENSDARG00000030614 542 1.64 - - - - - - - 0.815 0.825 synaptotagmin Ia [Source:ZFIN;Acc:ZDB-GENE-040718-165]
27. sema5a ENSDARG00000058821 333 1.635 - - - - - 0.761 0.874 - - sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8969]
28. tbc1d10a tbc1d10a 462 1.618 - - - - - 0.885 0.733 - -
29. CU467646.1_1 ENSDARG00000075090 128 1.616 - - - 0.704 - - 0.912 - - mucin-5AC-like [Source:NCBI gene;Acc:110439410]
30. dpy19l1l ENSDARG00000069995 584 1.605 - - - - - - 0.890 0.715 - dpy-19-like 1, like (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-030521-11]
31. six3b ENSDARG00000054879 2416 1.593 - - 0.757 0.836 - - - - - SIX homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-990415-128]
32. dpysl5a ENSDARG00000011141 1827 1.589 - - - - - - - 0.864 0.725 dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
33. si:dkey-12e7.1 ENSDARG00000069328, ENSDARG00000109272 239 1.576 - - - - - 0.776 - 0.800 - si:dkey-12e7.1 [Source:ZFIN;Acc:ZDB-GENE-050419-173]
34. znf280d ENSDARG00000077013 1387 1.572 - - - - - - - 0.870 0.702 zinc finger protein 280D [Source:ZFIN;Acc:ZDB-GENE-030131-2260]
35. lhx5 ENSDARG00000057936 785 1.561 - - 0.736 0.825 - - - - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
36. barhl1a ENSDARG00000035508, ENSDARG00000110061, ENSDARG00000112355 374 1.551 - - - - - - - 0.796 0.755 BarH-like homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-050417-212]
37. prdm1b ENSDARG00000098925 440 1.543 - - - 0.736 0.807 - - - - PR domain containing 1b, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-080618-2]
38. C5H9orf142 C5H9orf142 548 1.538 - - - - - 0.783 - 0.755 -
39. TMEM57 TMEM57 260 1.531 - - 0.814 - 0.717 - - - -
40. nkx2.2a ENSDARG00000053298 747 1.525 - - - 0.806 0.719 - - - - NK2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-403]
41. celsr1b ENSDARG00000058259 1219 1.521 - - - - - - - 0.763 0.758 cadherin EGF LAG seven-pass G-type receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050823-4]
42. SATB1 SATB1 928 1.519 - - 0.774 - - - - - 0.745
43. fam60al 2846 1.51 - - - 0.723 - - - 0.787 - family with sequence similarity 60, member A, like
44. etv1 ENSDARG00000101959 358 1.502 - - - 0.723 - - - 0.779 - ets variant 1 [Source:ZFIN;Acc:ZDB-GENE-070104-1]
45. ppp1r14ba ENSDARG00000044541 792 1.493 - - - - - - 0.700 - 0.793 protein phosphatase 1, regulatory (inhibitor) subunit 14Ba [Source:ZFIN;Acc:ZDB-GENE-060825-331]
46. foxg1b ENSDARG00000032705 354 1.491 - - - 0.705 - - - 0.786 - forkhead box G1b [Source:ZFIN;Acc:ZDB-GENE-040426-2437]
47. cldn11a ENSDARG00000020031 284 1.487 - - - 0.754 0.733 - - - - claudin 11a [Source:ZFIN;Acc:ZDB-GENE-040718-369]
48. celf3a ENSDARG00000034668 2432 1.481 - - - - - - - 0.713 0.768 cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
49. zgc:171531 zgc:171531 77 1.475 - - 0.740 - 0.735 - - - -
50. nrarpb ENSDARG00000018958 6225 1.475 - - - 0.730 - - - 0.745 - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
51. mcm7 ENSDARG00000101180 12417 1.457 - - - 0.709 - - - 0.748 - minichromosome maintenance complex component 7 [Source:ZFIN;Acc:ZDB-GENE-020419-27]
52. neurod4 ENSDARG00000003469, ENSDARG00000117149 1732 1.452 - - - - - - - 0.750 0.702 neuronal differentiation 4 [Source:ZFIN;Acc:ZDB-GENE-030730-1]
53. top1l ENSDARG00000070545 40529 1.449 - - - 0.727 - - - 0.722 - DNA topoisomerase I, like [Source:ZFIN;Acc:ZDB-GENE-060616-217]
54. aprt ENSDARG00000003519 686 1.446 - - - - - - 0.744 - 0.702 adenine phosphoribosyltransferase [Source:ZFIN;Acc:ZDB-GENE-040426-1492]
55. bcl11ab ENSDARG00000063153 3032 1.434 - - 0.705 0.729 - - - - - B cell CLL/lymphoma 11Ab [Source:ZFIN;Acc:ZDB-GENE-061009-4]
56. samd11 ENSDARG00000077852 631 1.429 - - - - - - - 0.702 0.727 sterile alpha motif domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-060428-2]
57. insm1b ENSDARG00000053301 2032 1.422 - - - 0.708 - - - - 0.714 insulinoma-associated 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2602]
58. aldh1a3 ENSDARG00000076933 95 1.411 - - 0.703 - 0.708 - - - - aldehyde dehydrogenase 1 family, member A3 [Source:ZFIN;Acc:ZDB-GENE-061128-2]
59. MPZL2 MPZL2 31 1 - - - - - - 1.000 - -
60. uckl1a ENSDARG00000001686 21 0.996 - - - - - - 0.996 - - uridine-cytidine kinase 1-like 1a [Source:ZFIN;Acc:ZDB-GENE-040724-238]
61. fstl3 ENSDARG00000025670 41 0.996 - - - - - - 0.996 - - follistatin-like 3 (secreted glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-050913-111]
62. Mar-03 Mar-03 44 0.996 - - - - - - 0.996 - -
63. hist2h3c_1 ENSDARG00000094154 45 0.996 - - - - - - 0.996 - - histone cluster 2, H3c [Source:ZFIN;Acc:ZDB-GENE-070424-8]
64. abcb9 ENSDARG00000056200, ENSDARG00000109326 63 0.996 - - - - - - 0.996 - - ATP-binding cassette, sub-family B (MDR/TAP), member 9 [Source:ZFIN;Acc:ZDB-GENE-050517-12]
65. slco1c1 ENSDARG00000016749 30 0.996 - - - - - - 0.996 - - solute carrier organic anion transporter family, member 1C1 [Source:ZFIN;Acc:ZDB-GENE-041210-50]
66. AL935186.3 ENSDARG00000109223 19 0.996 - - - - - - 0.996 - -
67. CU467646.1 ENSDARG00000075090 27 0.996 - - - - - - 0.996 - - mucin-5AC-like [Source:NCBI gene;Acc:110439410]
68. si:ch73-70k4.1 ENSDARG00000075915 69 0.996 - - - - - - 0.996 - - si:ch73-70k4.1 [Source:ZFIN;Acc:ZDB-GENE-030131-3788]
69. si:dkeyp-46h3.3 ENSDARG00000092887 11 0.996 - - - - - - 0.996 - - si:dkeyp-46h3.3 [Source:ZFIN;Acc:ZDB-GENE-060503-748]
70. trpc5a ENSDARG00000070504 5 0.996 - - - - - - 0.996 - - transient receptor potential cation channel, subfamily C, member 5a [Source:ZFIN;Acc:ZDB-GENE-040812-1]
71. si:ch211-286b5.9 ENSDARG00000086166 27 0.996 - - - - - - 0.996 - - si:ch211-286b5.9 [Source:ZFIN;Acc:ZDB-GENE-121214-63]
72. FBXO4 ENSDARG00000074170 54 0.996 - - - - - - 0.996 - - F-box protein 4 [Source:ZFIN;Acc:ZDB-GENE-081104-415]
73. f7i ENSDARG00000075827 4 0.996 - - - - - - 0.996 - - coagulation factor VIIi [Source:ZFIN;Acc:ZDB-GENE-021206-10]
74. pde4cb ENSDARG00000002411 63 0.996 - - - - - - 0.996 - - phosphodiesterase 4C, cAMP-specific b [Source:ZFIN;Acc:ZDB-GENE-030131-4075]
75. sc:d217 ENSDARG00000079645 32 0.991 - - - - - - 0.991 - - sc:d217 [Source:ZFIN;Acc:ZDB-GENE-080303-15]
76. plcd1a ENSDARG00000059123 46 0.99 - - - - - - 0.990 - - phospholipase C, delta 1a [Source:ZFIN;Acc:ZDB-GENE-071004-78]
77. si:ch211-113a14.10_1 si:ch211-113a14.10_1 59 0.99 - - - - - - 0.990 - -
78. atp1a1a.2 ENSDARG00000007739 121 0.99 - - - - - - 0.990 - - ATPase Na+/K+ transporting subunit alpha 1a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-001212-2]
79. BX548000.1 ENSDARG00000099044 45 0.99 - - - - - - 0.990 - -
80. CLDN10_1 CLDN10_1 71 0.989 - - - - - - 0.989 - -
81. tlr5b ENSDARG00000052322 86 0.989 - - - - - - 0.989 - - toll-like receptor 5b [Source:ZFIN;Acc:ZDB-GENE-040219-15]
82. NPM2 NPM2 41 0.986 - - - - - - 0.986 - -
83. SDK2 SDK2 145 0.986 - - - - - - 0.986 - -
84. ssbp3a ENSDARG00000058237 87 0.985 - - - - - - 0.985 - - single stranded DNA binding protein 3a [Source:ZFIN;Acc:ZDB-GENE-070705-484]
85. zfyve26 ENSDARG00000040131 87 0.983 - - - - - - 0.983 - - zinc finger, FYVE domain containing 26 [Source:ZFIN;Acc:ZDB-GENE-030131-3286]
86. zgc:101788 zgc:101788 9 0.983 - - - - - - 0.983 - -
87. C5H2orf42 C5H2orf42 65 0.983 - - - - - - 0.983 - -
88. cbln4 ENSDARG00000061240 67 0.982 - - - - - - 0.982 - - cerebellin 4 precursor [Source:ZFIN;Acc:ZDB-GENE-080204-58]
89. BRD8 ENSDARG00000055999 34 0.98 - - - - - - 0.980 - - bromodomain containing 8 [Source:HGNC Symbol;Acc:HGNC:19874]
90. gb:bc139653 gb:bc139653 239 0.98 - - - - - - 0.980 - -
91. plch2a ENSDARG00000059960 222 0.979 - - - - - - 0.979 - - phospholipase C, eta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6367]
92. CABZ01046432.1 ENSDARG00000079325 11 0.979 - - - - - - 0.979 - - uncharacterized LOC100331045 [Source:NCBI gene;Acc:100331045]
93. papss2a ENSDARG00000071021, ENSDARG00000110734, ENSDARG00000112597 49 0.978 - - - - - - 0.978 - - 3'-phosphoadenosine 5'-phosphosulfate synthase 2a [Source:ZFIN;Acc:ZDB-GENE-061110-85]
94. wnt9a ENSDARG00000063437 204 0.977 - - - - - - 0.977 - - wingless-type MMTV integration site family, member 9A [Source:ZFIN;Acc:ZDB-GENE-060825-97]
95. s1pr5b ENSDARG00000052192 52 0.977 - - - - - - 0.977 - - sphingosine-1-phosphate receptor 5b [Source:ZFIN;Acc:ZDB-GENE-061201-27]
96. epd ENSDARG00000103498, ENSDARG00000117020 84 0.975 - - - - - - 0.975 - - ependymin [Source:ZFIN;Acc:ZDB-GENE-980526-111]
97. rbck1 ENSDARG00000031954 95 0.975 - - - - - - 0.975 - - RanBP-type and C3HC4-type zinc finger containing 1 [Source:ZFIN;Acc:ZDB-GENE-040704-3]
98. ficd ENSDARG00000035595 129 0.974 - - - - - - 0.974 - - FIC domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-6588]
99. si:ch211-198d23.1 ENSDARG00000092574 104 0.973 - - - - - 0.973 - - - si:ch211-198d23.1 [Source:ZFIN;Acc:ZDB-GENE-081104-163]
100. si:ch211-199g17.8 si:ch211-199g17.8 9 0.972 - - - - - - 0.972 - -

There are 1056 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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