Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lhfpl3

Gene Name Gene ID Reads Annotation
lhfpl3 ENSDARG00000021595 107 LHFPL tetraspan subfamily member 3 [Source:ZFIN;Acc:ZDB-GENE-040801-180]










Genes with expression patterns similar to lhfpl3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lhfpl3 ENSDARG00000021595 107 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 LHFPL tetraspan subfamily member 3 [Source:ZFIN;Acc:ZDB-GENE-040801-180]
2. fyna ENSDARG00000011370 1679 2.259 0.702 - - - - 0.783 0.774 - - FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
3. DLGAP2 DLGAP2 36 1.953 - 1.000 - - - 0.953 - - -
4. pou3f2a ENSDARG00000070220 817 1.884 - 1.000 - - - 0.884 - - - POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
5. NETO2 121 1.836 - 1.000 - - - 0.836 - - - neuropilin and tolloid like 2, transcript variant X2
6. EGR4 ENSDARG00000077799 34 1.797 0.946 - - - - 0.851 - - - early growth response 4 [Source:ZFIN;Acc:ZDB-GENE-080204-90]
7. fam49a ENSDARG00000006672 939 1.796 - - - - - 0.962 0.834 - - family with sequence similarity 49, member A [Source:ZFIN;Acc:ZDB-GENE-031002-50]
8. C14H5orf45 C14H5orf45 83 1.786 0.786 1.000 - - - - - - -
9. BX640518.1 BX640518.1 24 1.786 0.786 1.000 - - - - - - -
10. chst1 ENSDARG00000088593, ENSDARG00000112011 102 1.777 0.937 - - - - 0.840 - - - carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-21]
11. AL935272.2 AL935272.2 37 1.774 - 1.000 - - - 0.774 - - -
12. VOPP1_1 VOPP1_1 73 1.771 0.771 1.000 - - - - - - -
13. si:ch211-225h9.2 si:ch211-225h9.2 16 1.771 0.771 1.000 - - - - - - -
14. hs6st3b ENSDARG00000069500 5 1.771 0.771 1.000 - - - - - - - heparan sulfate 6-O-sulfotransferase 3b [Source:ZFIN;Acc:ZDB-GENE-070103-3]
15. lrp2b ENSDARG00000007906 23 1.771 0.771 1.000 - - - - - - - low density lipoprotein receptor-related protein 2b [Source:ZFIN;Acc:ZDB-GENE-111115-1]
16. SLITRK4 ENSDARG00000079781 54 1.771 - 1.000 - - - 0.771 - - - SLIT and NTRK-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-140303-1]
17. ntrk1 ENSDARG00000004586 19 1.771 0.771 1.000 - - - - - - - neurotrophic tyrosine kinase, receptor, type 1 [Source:ZFIN;Acc:ZDB-GENE-980526-118]
18. si:ch211-121a2.4 ENSDARG00000028541 40 1.754 - 1.000 - - 0.754 - - - - si:ch211-121a2.4 [Source:ZFIN;Acc:ZDB-GENE-070705-23]
19. TRMT12 ENSDARG00000060338 58 1.752 - 1.000 - - 0.752 - - - - tRNA methyltransferase 12 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060825-182]
20. RIMBP2_1 RIMBP2_1 57 1.693 - - - - - 0.742 0.951 - -
21. ntng1a ENSDARG00000014973 23 1.689 0.771 - - - - 0.918 - - - netrin g1a [Source:ZFIN;Acc:ZDB-GENE-091118-13]
22. TMEM196 ENSDARG00000114159 80 1.671 0.786 0.885 - - - - - - - transmembrane protein 196 [Source:HGNC Symbol;Acc:HGNC:22431]
23. si:dkey-24g18.3 si:dkey-24g18.3 60 1.671 0.762 - - - - 0.909 - - -
24. rsph4a ENSDARG00000067606 132 1.66 0.771 0.889 - - - - - - - radial spoke head component 4A [Source:ZFIN;Acc:ZDB-GENE-030131-7437]
25. atp8a1 ENSDARG00000063001 146 1.633 - 0.903 - - - 0.730 - - - ATPase phospholipid transporting 8A1 [Source:ZFIN;Acc:ZDB-GENE-060929-36]
26. sorcs3b ENSDARG00000077349 72 1.628 - - - - - 0.883 0.745 - - sortilin related VPS10 domain containing receptor 3b [Source:ZFIN;Acc:ZDB-GENE-131121-455]
27. mir219-1 101 1.628 0.771 - - - - 0.857 - - - microRNA 219-1
28. gas7a ENSDARG00000074443, ENSDARG00000111294 250 1.613 - - - - - 0.819 - 0.794 - growth arrest-specific 7a [Source:ZFIN;Acc:ZDB-GENE-130128-1]
29. sox19b ENSDARG00000040266 532 1.613 0.757 - - - - 0.856 - - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
30. skor1b ENSDARG00000062448, ENSDARG00000112341 282 1.607 - 0.714 - - - 0.893 - - - SKI family transcriptional corepressor 1b [Source:ZFIN;Acc:ZDB-GENE-050419-82]
31. BX530409.1 BX530409.1 65 1.598 0.771 - - - - 0.827 - - -
32. pcdh2ac ENSDARG00000099783 325 1.594 - - - - - 0.883 - 0.711 - protocadherin 2 alpha c [Source:ZFIN;Acc:ZDB-GENE-041118-12]
33. GPRIN3 GPRIN3 169 1.589 - - - - - 0.719 0.870 - -
34. cux2b ENSDARG00000086345 519 1.589 - - - - - 0.801 - 0.788 - cut-like homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-081104-176]
35. pif1 ENSDARG00000020289 216 1.584 0.786 - - - 0.798 - - - - PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4928]
36. gabrg2 ENSDARG00000053665 434 1.581 - - - - - 0.802 - 0.779 - gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-091118-65]
37. BSN BSN 463 1.566 - 0.781 - - - - - 0.785 -
38. pax6b ENSDARG00000045936 349 1.566 0.760 - - - - 0.806 - - - paired box 6b [Source:ZFIN;Acc:ZDB-GENE-001031-1]
39. her4.2 ENSDARG00000056729, ENSDARG00000094426 289 1.565 - - - - - 0.847 - 0.718 - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
40. neurog1 ENSDARG00000056130 3924 1.557 0.752 - - - - 0.805 - - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
41. fstl5 ENSDARG00000040198 213 1.557 0.771 - - - - 0.786 - - - follistatin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070127-1]
42. mibp ENSDARG00000101362 37 1.553 0.759 - - - - - 0.794 - - muscle-specific beta 1 integrin binding protein [Source:ZFIN;Acc:ZDB-GENE-030404-1]
43. TUBB8P7_2 TUBB8P7_2 565 1.55 0.741 - - - - 0.809 - - -
44. slco4a1 ENSDARG00000075948 74 1.545 0.771 - - - - 0.774 - - - solute carrier organic anion transporter family, member 4A1 [Source:ZFIN;Acc:ZDB-GENE-060606-4]
45. dbx1a ENSDARG00000086393 3161 1.533 - - - - - 0.830 0.703 - - developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
46. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 1.531 - - - - - 0.771 - 0.760 - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
47. mir219-2 129 1.53 - - - - - 0.825 0.705 - - microRNA 219-2
48. mb21d2b mb21d2b 84 1.523 - 0.714 - - - 0.809 - - -
49. cacng2a ENSDARG00000032565 99 1.516 0.811 - - - - - 0.705 - - calcium channel, voltage-dependent, gamma subunit 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1401]
50. tnr ENSDARG00000020771 20 1.511 0.771 - - - - 0.740 - - - tenascin R (restrictin, janusin) [Source:ZFIN;Acc:ZDB-GENE-030804-1]
51. fgf13b ENSDARG00000056633 455 1.51 - - - - - 0.749 - 0.761 - fibroblast growth factor 13b [Source:ZFIN;Acc:ZDB-GENE-040426-1793]
52. dtnbp1b ENSDARG00000055206 64 1.51 - - - - - 0.800 0.710 - - dystrobrevin binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-060503-889]
53. nkx1.2lb ENSDARG00000099427 220 1.509 0.799 - - - - - 0.710 - - NK1 transcription factor related 2-like,b [Source:ZFIN;Acc:ZDB-GENE-040615-2]
54. zgc:153157 ENSDARG00000070423, ENSDARG00000115488 79 1.509 - 0.798 - - - 0.711 - - - zgc:153157 [Source:ZFIN;Acc:ZDB-GENE-060825-224]
55. kcnc1b ENSDARG00000032959, ENSDARG00000113595 36 1.491 - - - - 0.769 0.722 - - - potassium voltage-gated channel, Shaw-related subfamily, member 1b [Source:ZFIN;Acc:ZDB-GENE-080414-3]
56. enpp5 ENSDARG00000070625 550 1.488 0.761 - - - - 0.727 - - - ectonucleotide pyrophosphatase/phosphodiesterase 5 [Source:ZFIN;Acc:ZDB-GENE-041014-10]
57. SPEF1 ENSDARG00000022007 44 1.486 0.745 - - - 0.741 - - - - sperm flagellar 1 [Source:HGNC Symbol;Acc:HGNC:15874]
58. xkr6 xkr6 286 1.485 0.771 0.714 - - - - - - -
59. chat chat 463 1.483 0.733 - - - - 0.750 - - -
60. pax6a ENSDARG00000103379 3061 1.482 0.766 - - - - 0.716 - - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
61. prrt1 ENSDARG00000062208 368 1.479 - - - - - 0.737 - 0.742 - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
62. hoxa5a ENSDARG00000102501 1667 1.477 0.732 - - - - 0.745 - - - homeobox A5a [Source:ZFIN;Acc:ZDB-GENE-000823-9]
63. clstn1 ENSDARG00000031720 5286 1.443 0.732 - - - - 0.711 - - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
64. gpr37l1b ENSDARG00000056774, ENSDARG00000114481 143 1.439 - - - - - 0.737 - 0.702 - G protein-coupled receptor 37 like 1b [Source:ZFIN;Acc:ZDB-GENE-081104-324]
65. rab42a ENSDARG00000034215 692 1.427 0.717 - - - - - 0.710 - - RAB42, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-1983]
66. pcgf5a ENSDARG00000071007, ENSDARG00000113711, ENSDARG00000114273 22 1.42 - - 0.709 - - 0.711 - - - polycomb group ring finger 5a [Source:ZFIN;Acc:ZDB-GENE-080723-33]
67. AVPR1A AVPR1A 116 1 - 1.000 - - - - - - -
68. si:ch211-11p18.6 ENSDARG00000077068, ENSDARG00000102360 0 1 - 1.000 - - - - - - - si:ch211-11p18.6 [Source:ZFIN;Acc:ZDB-GENE-070912-24]
69. si:ch211-211i20.1 si:ch211-211i20.1 29 1 - 1.000 - - - - - - -
70. fth1b ENSDARG00000007975 96 1 - 1.000 - - - - - - - ferritin, heavy polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040912-30]
71. slc12a2_1 ENSDARG00000104573 1 1 - 1.000 - - - - - - - solute carrier family 12 (sodium/potassium/chloride transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040625-53]
72. foxg1b ENSDARG00000032705 354 1 - 1.000 - - - - - - - forkhead box G1b [Source:ZFIN;Acc:ZDB-GENE-040426-2437]
73. CU984579.1 ENSDARG00000116863 15 1 - 1.000 - - - - - - - leucine-rich repeat neuronal protein 4-like [Source:NCBI gene;Acc:564748]
74. KCNT2 ENSDARG00000075812 23 1 - 1.000 - - - - - - - potassium channel, subfamily T, member 2 [Source:ZFIN;Acc:ZDB-GENE-130530-783]
75. si:ch211-209p16.1 si:ch211-209p16.1 1 1 - 1.000 - - - - - - -
76. zgc:113397 zgc:113397 60 1 - 1.000 - - - - - - -
77. gpr126 gpr126 51 1 - 1.000 - - - - - - -
78. gramd4 gramd4 4 1 - 1.000 - - - - - - -
79. CT573248.1 ENSDARG00000074029 10 1 - 1.000 - - - - - - -
80. si:dkey-58f10.4 ENSDARG00000094820 3 1 - 1.000 - - - - - - - si:dkey-58f10.4 [Source:ZFIN;Acc:ZDB-GENE-060526-318]
81. FBXL21 FBXL21 6 1 - 1.000 - - - - - - -
82. uhrf1bp1 ENSDARG00000077011 6 1 - 1.000 - - - - - - - UHRF1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-090312-82]
83. ankrd1b ENSDARG00000076192 204 1 - 1.000 - - - - - - - ankyrin repeat domain 1b (cardiac muscle) [Source:ZFIN;Acc:ZDB-GENE-070820-13]
84. PSTPIP2 ENSDARG00000089569 1 1 - 1.000 - - - - - - - proline-serine-threonine phosphatase interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-091204-90]
85. KLHL38 KLHL38 15 1 - 1.000 - - - - - - -
86. ipp ENSDARG00000075339 3 1 - 1.000 - - - - - - - intracisternal A particle-promoted polypeptide [Source:ZFIN;Acc:ZDB-GENE-080204-28]
87. atad1b ENSDARG00000056609 40 1 - 1.000 - - - - - - - ATPase family, AAA domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030616-44]
88. si:dkey-7n6.2 ENSDARG00000094602, ENSDARG00000111257 56 1 - 1.000 - - - - - - - si:dkey-7n6.2 [Source:ZFIN;Acc:ZDB-GENE-091204-262]
89. bai3 bai3 92 1 - 1.000 - - - - - - -
90. pcsk7 ENSDARG00000069968 5 1 - 1.000 - - - - - - - proprotein convertase subtilisin/kexin type 7 [Source:ZFIN;Acc:ZDB-GENE-030131-7293]
91. ifitm5 ENSDARG00000105153 132 1 - 1.000 - - - - - - - interferon induced transmembrane protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-8970]
92. cyp27a1.4 ENSDARG00000055159 47 1 - 1.000 - - - - - - - cytochrome P450, family 27, subfamily A, polypeptide 1, gene 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1060]
93. si:dkey-16p6.1_1 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 37 1 - 1.000 - - - - - - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
94. ptx3b ENSDARG00000079515 10 1 - 1.000 - - - - - - - pentraxin 3, long b [Source:ZFIN;Acc:ZDB-GENE-081104-385]
95. OTOL1 OTOL1 19 1 - 1.000 - - - - - - -
96. AKNA_1 AKNA_1 2 1 - 1.000 - - - - - - -
97. TTC40 TTC40 1 1 - 1.000 - - - - - - -
98. PDE9A_1 PDE9A_1 1 1 - 1.000 - - - - - - -
99. ENSDARG00000092910 ENSDARG00000092910 44 1 - 1.000 - - - - - - -
100. ccdc33 ENSDARG00000051858 11 1 - 1.000 - - - - - - - coiled-coil domain containing 33 [Source:ZFIN;Acc:ZDB-GENE-101011-1]

There are 1105 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA