Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lgi2b

Gene Name Gene ID Reads Annotation
lgi2b ENSDARG00000069701, ENSDARG00000116343 66 leucine-rich repeat LGI family, member 2b [Source:ZFIN;Acc:ZDB-GENE-060217-3]










Genes with expression patterns similar to lgi2b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lgi2b ENSDARG00000069701, ENSDARG00000116343 66 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 leucine-rich repeat LGI family, member 2b [Source:ZFIN;Acc:ZDB-GENE-060217-3]
2. gsx1 ENSDARG00000035735 1243 2.658 0.871 - - - - 0.900 0.887 - - GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
3. GADD45G GADD45G 382 2.631 0.860 - - - - 0.923 0.848 - -
4. her4.2 ENSDARG00000056729, ENSDARG00000094426 289 2.606 0.721 - - - - 0.907 0.978 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
5. GJD2_1 GJD2_1 3045 2.592 0.799 - - - - 0.907 0.886 - -
6. elavl4 ENSDARG00000045639 998 2.592 0.825 - - - - 0.965 0.802 - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
7. nacad ENSDARG00000012347 1268 2.587 0.854 - - - - 0.843 0.890 - - NAC alpha domain containing [Source:ZFIN;Acc:ZDB-GENE-091020-7]
8. APBB3 ENSDARG00000053771 654 2.579 0.853 - - - - 0.879 0.847 - - amyloid beta (A4) precursor protein-binding, family B, member 3 [Source:ZFIN;Acc:ZDB-GENE-140106-53]
9. chst2b ENSDARG00000058585 33 2.577 0.939 - - 0.753 - - 0.885 - - carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2b [Source:ZFIN;Acc:ZDB-GENE-060720-33]
10. cacng3b ENSDARG00000076401 91 2.573 0.920 - - - - 0.725 0.928 - - calcium channel, voltage-dependent, gamma subunit 3b [Source:ZFIN;Acc:ZDB-GENE-090828-1]
11. CR407704.1 CR407704.1 188 2.565 0.857 - - - - 0.902 0.806 - -
12. SHANK1 ENSDARG00000060539 102 2.564 0.879 - - - - 0.867 0.818 - - SH3 and multiple ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130530-691]
13. rusc1 ENSDARG00000078125 617 2.56 0.832 - - - - 0.821 0.907 - - RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
14. zgc:194665 ENSDARG00000004577 136 2.549 0.881 - - - - 0.883 0.785 - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
15. her8.2 ENSDARG00000069675 315 2.547 0.802 - - - - 0.822 0.923 - - hairy-related 8.2 [Source:ZFIN;Acc:ZDB-GENE-060815-4]
16. ATP6AP1L ATP6AP1L 164 2.543 0.842 - - - - 0.824 0.877 - -
17. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 2.534 0.929 - - - - 0.780 0.825 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
18. pcloa ENSDARG00000063299 353 2.521 0.871 - - - - 0.919 0.731 - - piccolo presynaptic cytomatrix protein a [Source:ZFIN;Acc:ZDB-GENE-030131-8115]
19. scn2b ENSDARG00000101713 796 2.504 0.815 - - - - 0.818 0.871 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
20. scn8aa ENSDARG00000005775 792 2.474 0.862 - - - - 0.823 0.789 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
21. sypb ENSDARG00000002230 262 2.469 0.753 - - - - 0.882 0.834 - - synaptophysin b [Source:ZFIN;Acc:ZDB-GENE-040718-205]
22. NEFH NEFH 101 2.466 0.946 - - - - 0.703 0.817 - -
23. cdk5r1b ENSDARG00000045087 2075 2.46 0.843 - - - - 0.914 0.703 - - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
24. nmnat2 ENSDARG00000004580 370 2.458 0.802 - - - - 0.781 0.875 - - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
25. gabrg2 ENSDARG00000053665 434 2.457 0.870 - - - - 0.851 0.736 - - gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-091118-65]
26. dnm1b ENSDARG00000009281 219 2.453 0.859 - - - - 0.798 0.796 - - dynamin 1b [Source:ZFIN;Acc:ZDB-GENE-100920-3]
27. stx1b ENSDARG00000000503 2724 2.447 0.761 - - - - 0.860 0.826 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
28. tmem59l ENSDARG00000003655 1536 2.445 0.702 - - - - 0.943 0.800 - - transmembrane protein 59-like [Source:ZFIN;Acc:ZDB-GENE-040426-2651]
29. C21H5orf24 C21H5orf24 333 2.443 0.897 - - - - 0.805 0.741 - -
30. TUBB8P7_1 TUBB8P7_1 2722 2.439 0.807 - - - - 0.766 0.866 - -
31. LRRN3 LRRN3 261 2.433 0.810 - - - - 0.710 0.913 - -
32. map7d2a ENSDARG00000068480 513 2.416 0.757 - - - - 0.838 0.821 - - MAP7 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-150]
33. slc1a2b ENSDARG00000102453 3136 2.414 0.828 - - - - 0.756 0.830 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
34. map1aa ENSDARG00000059601 599 2.413 0.710 - - - - 0.913 0.790 - - microtubule-associated protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-100426-2]
35. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 2.413 0.775 - - - - 0.805 0.833 - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
36. sept5a ENSDARG00000013843 1206 2.392 0.704 - - - - 0.805 0.883 - - septin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7868]
37. STMN3 ENSDARG00000038465 1009 2.38 0.706 - - - - 0.813 0.861 - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
38. CR538726.1 ENSDARG00000097179 321 2.377 0.718 - - - - 0.804 0.855 - -
39. prrt1 ENSDARG00000062208 368 2.372 0.734 - - - - 0.774 0.864 - - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
40. mllt11 ENSDARG00000071026 2518 2.338 0.743 - - - - 0.731 0.864 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
41. gap43 ENSDARG00000099744 4114 2.3 0.721 - - - - 0.722 0.857 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
42. rac3a ENSDARG00000090062 394 2.297 0.728 - - - - 0.713 0.856 - - Rac family small GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-040718-256]
43. snap25a ENSDARG00000020609 4537 2.265 0.730 - - - - 0.740 0.795 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
44. CR848045.1 CR848045.1 459 2.242 0.705 - - - - 0.709 0.828 - -
45. sh3gl2 sh3gl2 1305 2.234 0.763 - - - - 0.726 0.745 - -
46. ppp2r2c ppp2r2c 441 2.152 0.712 - 0.700 - - 0.740 - - -
47. rheb ENSDARG00000090213 1432 1.929 - - - - - 0.961 0.968 - - Ras homolog, mTORC1 binding [Source:ZFIN;Acc:ZDB-GENE-040426-1690]
48. zgc:100906 ENSDARG00000033599 344 1.921 - - - - - 0.947 0.974 - - zgc:100906 [Source:ZFIN;Acc:ZDB-GENE-040801-20]
49. C8H9orf172 C8H9orf172 113 1.897 0.939 - - - - - 0.958 - -
50. lrrtm1 ENSDARG00000052713 1041 1.893 - - - - - 0.984 0.909 - - leucine rich repeat transmembrane neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-050506-80]
51. BX511121.1 ENSDARG00000029997 1774 1.886 - - - - - 0.935 0.951 - -
52. si:ch211-216b21.2 ENSDARG00000060253 54 1.885 0.939 - - - - - 0.946 - - si:ch211-216b21.2 [Source:ZFIN;Acc:ZDB-GENE-130603-96]
53. NPBWR2 NPBWR2 132 1.877 0.939 - - - - 0.938 - - -
54. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 1.874 - - - - - 0.938 0.936 - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
55. atpv0e2 ENSDARG00000059057 585 1.869 0.902 - - - - - 0.967 - - ATPase H+ transporting V0 subunit e2 [Source:ZFIN;Acc:ZDB-GENE-050522-135]
56. C8H1orf106 C8H1orf106 2690 1.859 - - - - - 0.916 0.943 - -
57. pou2f2a ENSDARG00000019658, ENSDARG00000036816 2027 1.858 - - - - - 0.955 0.903 - - POU class 2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-060310-2]
58. slc35g2b ENSDARG00000045447 378 1.851 - - - - - 0.962 0.889 - - solute carrier family 35, member G2b [Source:ZFIN;Acc:ZDB-GENE-050320-142]
59. PPFIA3 ENSDARG00000077053 310 1.844 0.901 - - - - - 0.943 - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
60. calb1 ENSDARG00000031598 252 1.843 0.961 - - - - - 0.882 - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
61. her4.3 ENSDARG00000070770 613 1.839 - - - - - 0.919 0.920 - - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
62. nptnb ENSDARG00000043864 165 1.833 - - - - - 0.856 0.977 - - neuroplastin b [Source:ZFIN;Acc:ZDB-GENE-040426-1821]
63. neurog1 ENSDARG00000056130 3924 1.831 - - - - - 0.903 0.928 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
64. zic6 ENSDARG00000071496 402 1.83 0.896 - - - - 0.934 - - - zic family member 6 [Source:ZFIN;Acc:ZDB-GENE-061207-1]
65. dync1i1 ENSDARG00000060948 554 1.827 - - - - - 0.913 0.914 - - dynein, cytoplasmic 1, intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-061215-62]
66. heyl ENSDARG00000055798, ENSDARG00000112770 76 1.825 - - - - - 0.901 0.924 - - hes-related family bHLH transcription factor with YRPW motif-like [Source:ZFIN;Acc:ZDB-GENE-030131-7074]
67. si:dkey-17e6.2 si:dkey-17e6.2 72 1.825 0.939 - - - - - 0.886 - -
68. cspg5a ENSDARG00000069981 1699 1.824 - - - - - 0.949 0.875 - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
69. trim36 ENSDARG00000062794 785 1.823 - - - - - 0.919 0.904 - - tripartite motif containing 36 [Source:ZFIN;Acc:ZDB-GENE-040426-2936]
70. AGO1 ENSDARG00000092644 4521 1.821 - - - - - 0.913 0.908 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
71. lgi2a ENSDARG00000111069 965 1.819 0.906 - - - - 0.913 - - - leucine-rich repeat LGI family, member 2a [Source:ZFIN;Acc:ZDB-GENE-060217-2]
72. lgi1a ENSDARG00000020493 1218 1.818 - - - - - 0.855 0.963 - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
73. st6gal1 ENSDARG00000044514 142 1.817 0.861 - - - - - 0.956 - - ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:ZFIN;Acc:ZDB-GENE-060322-3]
74. slc12a5b ENSDARG00000078187 329 1.816 - - - - - 0.875 0.941 - - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
75. nova2 ENSDARG00000017673 7685 1.816 - - - - - 0.878 0.938 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
76. SSX2IP SSX2IP 316 1.815 - - 0.851 - - - 0.964 - -
77. mnx2b ENSDARG00000030350 484 1.815 - - - - - 0.870 0.945 - - motor neuron and pancreas homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-040415-2]
78. atp2b3b ENSDARG00000023445 1424 1.813 0.852 - - - - - 0.961 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
79. her15.1 ENSDARG00000054560, ENSDARG00000054562 1500 1.812 - - - - - 0.855 0.957 - - hairy and enhancer of split-related 15, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030707-2]
80. nes ENSDARG00000088805 2710 1.812 - - - - - 0.858 0.954 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
81. elavl3 ENSDARG00000014420 8644 1.809 - - - - - 0.900 0.909 - - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
82. nhlh2 ENSDARG00000025495 1860 1.808 - - - - - 0.858 0.950 - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
83. pou3f2a ENSDARG00000070220 817 1.807 - - - - - 0.923 0.884 - - POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
84. syngr3a ENSDARG00000014871 405 1.804 - - - - - 0.933 0.871 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
85. fbxo41 ENSDARG00000078908 95 1.803 - - - - - 0.929 0.874 - - F-box protein 41 [Source:ZFIN;Acc:ZDB-GENE-090313-350]
86. shank2 ENSDARG00000062325 66 1.798 0.939 - - - - 0.859 - - - SH3 and multiple ankyrin repeat domains 2 [Source:ZFIN;Acc:ZDB-GENE-061207-58]
87. si:dkey-228i19.32 si:dkey-228i19.32 9 1.798 0.939 - - - - 0.859 - - -
88. BX470131.1 BX470131.1 86 1.798 0.939 - - - - - 0.859 - -
89. yod1 ENSDARG00000008542 56 1.794 0.939 - 0.855 - - - - - - YOD1 deubiquitinase [Source:ZFIN;Acc:ZDB-GENE-050417-217]
90. tlx3b ENSDARG00000017615, ENSDARG00000114069 84 1.793 0.994 - - - - 0.799 - - - T cell leukemia homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-021021-1]
91. sox19b ENSDARG00000040266 532 1.792 - - - - - 0.889 0.903 - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
92. eno2 ENSDARG00000014287 2162 1.79 0.828 - - - - - 0.962 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
93. inab ENSDARG00000053248 3239 1.789 0.886 - - - - 0.903 - - - internexin neuronal intermediate filament protein, alpha b [Source:ZFIN;Acc:ZDB-GENE-990415-83]
94. SPOCK1 ENSDARG00000074644 794 1.787 - - - - - 0.898 0.889 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
95. evx2 ENSDARG00000059255 317 1.787 0.958 - - - - 0.829 - - - even-skipped homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-980526-215]
96. dnajc5aa ENSDARG00000042948 2885 1.783 - - - - - 0.929 0.854 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
97. CABZ01028287.1 CABZ01028287.1 626 1.78 - - - - - 0.933 0.847 - -
98. add2 ENSDARG00000074581 1402 1.776 0.885 - - - - - 0.891 - - adducin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-080718-4]
99. slc8a2b ENSDARG00000100592 598 1.775 - - - - - 0.907 0.868 - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
100. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1.771 0.871 - - - - - 0.900 - - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]

There are 1630 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA