Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for lgi1b

Gene Name Gene ID Reads Annotation
lgi1b ENSDARG00000058421 12 leucine-rich, glioma inactivated 1b [Source:ZFIN;Acc:ZDB-GENE-060217-1]










Genes with expression patterns similar to lgi1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lgi1b ENSDARG00000058421 12 5 1.000 - 1.000 1.000 1.000 - - - 1.000 leucine-rich, glioma inactivated 1b [Source:ZFIN;Acc:ZDB-GENE-060217-1]
2. gper gper 4 1.951 1.000 - - - 0.951 - - - -
3. crygm2e ENSDARG00000044875 1 1.749 - - 0.749 - 1.000 - - - - crystallin, gamma M2e [Source:ZFIN;Acc:ZDB-GENE-081105-116]
4. arhgap15 ENSDARG00000062349 28 1.714 1.000 - - - 0.714 - - - - Rho GTPase activating protein 15 [Source:ZFIN;Acc:ZDB-GENE-070912-314]
5. st3gal1 ENSDARG00000079654 4 1.714 - - - 1.000 0.714 - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060321-1]
6. BX511021.2 ENSDARG00000097646 5 1.603 - - - - 0.871 - - - 0.732
7. camkvl ENSDARG00000057000 40 1.527 - - 0.749 - 0.778 - - - - CaM kinase-like vesicle-associated, like [Source:ZFIN;Acc:ZDB-GENE-090311-58]
8. si:dkey-178e17.1 ENSDARG00000080000 4 1.481 - - 0.749 - - - - - 0.732 si:dkey-178e17.1 [Source:ZFIN;Acc:ZDB-GENE-081104-41]
9. si:dkey-11f7.4 si:dkey-11f7.4 1 1.463 - - 0.749 - 0.714 - - - -
10. piwil1 ENSDARG00000041699 21 1.433 - - 0.718 - 0.715 - - - - piwi-like RNA-mediated gene silencing 1 [Source:ZFIN;Acc:ZDB-GENE-030813-2]
11. olfcw1 ENSDARG00000100604, ENSDARG00000109588 0 1 - - - - 1.000 - - - - olfactory receptor C family, w1 [Source:ZFIN;Acc:ZDB-GENE-050522-281]
12. ighm ighm 6 1 - - - - 1.000 - - - -
13. tceb3 40 1 1.000 - - - - - - - - transcription elongation factor B (SIII), polypeptide 3
14. CABZ01090975.1 CABZ01090975.1 9 1 1.000 - - - - - - - -
15. MSH4 ENSDARG00000075826 37 1 1.000 - - - - - - - - mutS homolog 4 [Source:ZFIN;Acc:ZDB-GENE-131121-643]
16. snx21 ENSDARG00000062770, ENSDARG00000111065 9 1 1.000 - - - - - - - - sorting nexin family member 21 [Source:ZFIN;Acc:ZDB-GENE-061013-557]
17. abcc8 ENSDARG00000051879, ENSDARG00000114458 18 1 - - - - 1.000 - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 8 [Source:ZFIN;Acc:ZDB-GENE-050517-22]
18. tmprss13a ENSDARG00000100969 84 1 1.000 - - - - - - - - transmembrane serine protease 13a [Source:ZFIN;Acc:ZDB-GENE-090309-3]
19. zgc:153116 ENSDARG00000077205 7 1 - - - - 1.000 - - - - zgc:153116 [Source:ZFIN;Acc:ZDB-GENE-060825-107]
20. mab21l3 ENSDARG00000076013, ENSDARG00000112160 35 1 1.000 - - - - - - - - mab-21-like 3 [Source:ZFIN;Acc:ZDB-GENE-070912-242]
21. zdhhc24 ENSDARG00000105134, ENSDARG00000110259, ENSDARG00000116301 6 1 - - - - 1.000 - - - - zinc finger, DHHC-type containing 24 [Source:ZFIN;Acc:ZDB-GENE-040718-8]
22. or135-1 ENSDARG00000053648 1 1 1.000 - - - - - - - - odorant receptor, family H, subfamily 135, member 1 [Source:ZFIN;Acc:ZDB-GENE-070806-32]
23. si:dkey-27j5.5 ENSDARG00000026383 6 1 - - - - 1.000 - - - - si:dkey-27j5.5 [Source:ZFIN;Acc:ZDB-GENE-121214-264]
24. Metazoa_SRP_29 Metazoa_SRP_29 1 1 1.000 - - - - - - - -
25. ompb ENSDARG00000032380, ENSDARG00000115093 12 1 - - - - 1.000 - - - - olfactory marker protein b [Source:ZFIN;Acc:ZDB-GENE-030103-1]
26. zgc:195633_2 34 1 1.000 - - - - - - - - zgc:195633
27. RNH1_1 RNH1_1 0 1 - - - - 1.000 - - - -
28. si:dkey-78i1.2 si:dkey-78i1.2 15 1 1.000 - - - - - - - -
29. Metazoa_SRP_6 Metazoa_SRP_6 7 1 - - - - 1.000 - - - -
30. zgc:123068 ENSDARG00000017489 15 1 - - - - 1.000 - - - - zgc:123068 [Source:ZFIN;Acc:ZDB-GENE-051030-98]
31. U6_24 U6_24 0 1 - - - - 1.000 - - - -
32. si:dkey-153k10.6 10 1 - - - - 1.000 - - - - si:dkey-153k10.6, transcript variant X1
33. gna15.3 ENSDARG00000056654, ENSDARG00000092948 9 1 - - - 1.000 - - - - - guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-050208-700]
34. si:dkey-25o1.3 si:dkey-25o1.3 0 1 - - - - 1.000 - - - -
35. echdc1 68 1 1.000 - - - - - - - - enoyl CoA hydratase domain containing 1, transcript variant 1
36. plxna1_1 plxna1_1 1 1 - - - 1.000 - - - - -
37. SYTL2 SYTL2 139 1 1.000 - - - - - - - -
38. bbs9 ENSDARG00000079217 4 1 - - - - 1.000 - - - - Bardet-Biedl syndrome 9 [Source:ZFIN;Acc:ZDB-GENE-081027-4]
39. neu3.2 ENSDARG00000010047, ENSDARG00000117176 68 1 - - - - 1.000 - - - - sialidase 3 (membrane sialidase), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040801-262]
40. si:dkeyp-46h3.8 ENSDARG00000093704 9 1 1.000 - - - - - - - - si:dkeyp-46h3.8 [Source:ZFIN;Acc:ZDB-GENE-060503-183]
41. VPS13B VPS13B 1 1 1.000 - - - - - - - -
42. fnbp1 fnbp1 5 1 - - - - 1.000 - - - -
43. abcg1 ENSDARG00000063475 97 1 1.000 - - - - - - - - ATP-binding cassette, sub-family G (WHITE), member 1 [Source:ZFIN;Acc:ZDB-GENE-070424-84]
44. samsn1b ENSDARG00000078647 8 1 - - - - 1.000 - - - - SAM domain, SH3 domain and nuclear localisation signals 1b [Source:ZFIN;Acc:ZDB-GENE-041010-135]
45. CR762480.2 ENSDARG00000102728 1 1 - - - - 1.000 - - - -
46. RNF214_1 RNF214_1 5 1 1.000 - - - - - - - -
47. cgrrf1 ENSDARG00000037040, ENSDARG00000109850, ENSDARG00000110308 50 1 1.000 - - - - - - - - cell growth regulator with ring finger domain 1 [Source:ZFIN;Acc:ZDB-GENE-040724-100]
48. tsg101 tsg101 1 1 - - - - 1.000 - - - -
49. znhit3 ENSDARG00000023950 61 1 1.000 - - - - - - - - zinc finger, HIT-type containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1114]
50. plscr3a ENSDARG00000093078 7 1 - - - - 1.000 - - - - phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
51. ASPG_1 ASPG_1 2 1 - - - - 1.000 - - - -
52. BX004994.2 BX004994.2 17 1 1.000 - - - - - - - -
53. BX088691.1 BX088691.1 9 1 - - - 1.000 - - - - -
54. CABZ01034707.1 CABZ01034707.1 122 1 1.000 - - - - - - - -
55. CDHR5 CDHR5 2 1 1.000 - - - - - - - -
56. ANO7 ANO7 54 1 1.000 - - - - - - - -
57. gadd45aa ENSDARG00000043581 114 1 1.000 - - - - - - - - growth arrest and DNA-damage-inducible, alpha, a [Source:ZFIN;Acc:ZDB-GENE-040426-1501]
58. ADAM12 ENSDARG00000116062 35 1 1.000 - - - - - - - - ADAM metallopeptidase domain 12 [Source:HGNC Symbol;Acc:HGNC:190]
59. si:dkey-23a23.1 ENSDARG00000094824 1 1 1.000 - - - - - - - - si:dkey-23a23.1 [Source:ZFIN;Acc:ZDB-GENE-060503-65]
60. CR626884.3 ENSDARG00000104648 1 1 - - - - 1.000 - - - -
61. matn3a ENSDARG00000069245 2410 1 1.000 - - - - - - - - matrilin 3a [Source:ZFIN;Acc:ZDB-GENE-040822-21]
62. si:dkeyp-75b4.8 ENSDARG00000077542 0 1 - - - - 1.000 - - - - si:dkeyp-75b4.8 [Source:ZFIN;Acc:ZDB-GENE-090313-395]
63. aven ENSDARG00000002894 49 1 1.000 - - - - - - - - apoptosis, caspase activation inhibitor [Source:ZFIN;Acc:ZDB-GENE-041001-171]
64. CU183952.1 CU183952.1 32 1 1.000 - - - - - - - -
65. CU457819.2 ENSDARG00000105374 8 1 - - - - 1.000 - - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
66. tecta ENSDARG00000059558 15 1 1.000 - - - - - - - - tectorin alpha [Source:ZFIN;Acc:ZDB-GENE-110411-120]
67. AL935293.1 AL935293.1 2 1 1.000 - - - - - - - -
68. SLCO5A1 SLCO5A1 6 1 - - - - 1.000 - - - -
69. si:dkey-265e15.5 ENSDARG00000103229 6 1 - - - - 1.000 - - - - si:dkey-265e15.5 [Source:ZFIN;Acc:ZDB-GENE-081104-6]
70. CABZ01046432.1 ENSDARG00000079325 11 1 1.000 - - - - - - - - uncharacterized LOC100331045 [Source:NCBI gene;Acc:100331045]
71. DEPDC4 DEPDC4 1 1 - - - - 1.000 - - - -
72. si:ch211-202n12.5 si:ch211-202n12.5 19 1 1.000 - - - - - - - -
73. CU681842.3 CU681842.3 2 1 - - - - 1.000 - - - -
74. UTS2R_1 UTS2R_1 1 1 - - - - 1.000 - - - -
75. ptpn20 ENSDARG00000075459 1 1 1.000 - - - - - - - - protein tyrosine phosphatase, non-receptor type 20 [Source:ZFIN;Acc:ZDB-GENE-090313-90]
76. si:dkey-9a20.8 si:dkey-9a20.8 8 1 - - - - 1.000 - - - -
77. FOXL2 239 1 1.000 - - - - - - - - forkhead box L2, transcript variant X1
78. BX897671.1 BX897671.1 10 1 1.000 - - - - - - - -
79. ZNF135_3 ZNF135_3 1 1 1.000 - - - - - - - -
80. CR854855.2 CR854855.2 1 1 - - - - 1.000 - - - -
81. si:ch1073-525h16.1 si:ch1073-525h16.1 1 1 1.000 - - - - - - - -
82. podn ENSDARG00000019025, ENSDARG00000113615 1 1 1.000 - - - - - - - - podocan [Source:ZFIN;Acc:ZDB-GENE-100922-117]
83. SNORA65_1 SNORA65_1 1 1 - - - 1.000 - - - - -
84. si:dkey-197d18.1 si:dkey-197d18.1 4 1 - - - - 1.000 - - - -
85. pip4k2ab ENSDARG00000063544 1 1 - - - - 1.000 - - - - phosphatidylinositol-5-phosphate 4-kinase, type II, alpha b [Source:ZFIN;Acc:ZDB-GENE-070912-272]
86. ciz1b ENSDARG00000089461 57 1 1.000 - - - - - - - - cdkn1a interacting zinc finger protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2933]
87. CR356223.3 CR356223.3 0 1 - - - - 1.000 - - - -
88. si:dkey-3b8.4 si:dkey-3b8.4 13 1 - - - - 1.000 - - - -
89. si:dkey-101n15.3 si:dkey-101n15.3 1 1 - - - - 1.000 - - - -
90. C25H19orf40 C25H19orf40 17 1 1.000 - - - - - - - -
91. ANGPT2 ANGPT2 2 1 - - - - 1.000 - - - -
92. ZNF835 ZNF835 6 1 - - - - 1.000 - - - -
93. slc15a4 ENSDARG00000102612 1096 1 1.000 - - - - - - - - solute carrier family 15 (oligopeptide transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1047]
94. klhl32 ENSDARG00000003576 99 1 1.000 - - - - - - - - kelch-like family member 32 [Source:ZFIN;Acc:ZDB-GENE-070209-47]
95. itpr2 ENSDARG00000011909 3 1 - - - - 1.000 - - - - inositol 1,4,5-trisphosphate receptor, type 2 [Source:ZFIN;Acc:ZDB-GENE-050419-192]
96. ZNF337_17 ZNF337_17 12 1 - - - - 1.000 - - - -
97. prkab1a ENSDARG00000044183 264 1 1.000 - - - - - - - - protein kinase, AMP-activated, beta 1 non-catalytic subunit, a [Source:ZFIN;Acc:ZDB-GENE-040718-377]
98. GPR137B_1 GPR137B_1 8 1 1.000 - - - - - - - -
99. si:dkey-163m14.5 si:dkey-163m14.5 1 1 1.000 - - - - - - - -
100. mlycd ENSDARG00000104732, ENSDARG00000117073 5 1 1.000 - - - - - - - - malonyl-CoA decarboxylase [Source:ZFIN;Acc:ZDB-GENE-070410-120]

There are 451 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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