Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lgi1a

Gene Name Gene ID Reads Annotation
lgi1a ENSDARG00000020493 1218 leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]










Genes with expression patterns similar to lgi1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lgi1a ENSDARG00000020493 1218 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
2. TUBB8P7_1 TUBB8P7_1 2722 4.226 0.774 0.704 - - 0.983 0.889 0.876 - -
3. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 3.555 0.771 - - - 0.976 0.869 0.939 - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
4. nrarpb ENSDARG00000018958 6225 3.456 - 0.798 - - 0.916 0.836 0.906 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
5. atp6v0cb ENSDARG00000036577 3472 3.454 0.777 - - - 0.974 0.828 0.875 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
6. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 3.434 0.733 - 0.985 - - 0.874 0.842 - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
7. calm3a ENSDARG00000015050, ENSDARG00000100825 1817 3.384 0.782 - - - 0.984 0.863 0.755 - - calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
8. tuba1c ENSDARG00000055216 8384 3.35 0.747 - 0.897 - - 0.889 0.817 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
9. plp1a ENSDARG00000103732 3544 3.339 0.749 - 0.911 - - 0.760 0.919 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
10. gpr85 ENSDARG00000068701, ENSDARG00000116501 372 3.326 - 0.760 - - - 0.926 0.870 0.770 - G protein-coupled receptor 85 [Source:ZFIN;Acc:ZDB-GENE-000710-2]
11. nova2 ENSDARG00000017673 7685 3.316 - 0.729 0.753 - - 0.926 0.908 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
12. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 3.308 - - - - 0.972 0.871 0.754 0.711 - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
13. sept5a ENSDARG00000013843 1206 3.276 0.767 - - - - 0.882 0.872 0.755 - septin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7868]
14. syngr3a ENSDARG00000014871 405 3.264 0.824 0.773 - - - 0.860 0.807 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
15. dbx2 2971 3.259 - 0.722 0.927 - - 0.792 0.818 - - developing brain homeobox 2
16. nrn1a ENSDARG00000071860 1311 3.254 0.762 0.762 - - - 0.800 0.930 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
17. snap25a ENSDARG00000020609 4537 3.248 0.845 0.752 - - - 0.881 0.770 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
18. atp2b3b ENSDARG00000023445 1424 3.245 0.789 0.774 - - - 0.706 0.976 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
19. gap43 ENSDARG00000099744 4114 3.243 0.832 0.772 - - - 0.822 0.817 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
20. rbfox3 rbfox3 1443 3.243 0.819 0.796 - - - 0.874 0.754 - -
21. nmnat2 ENSDARG00000004580 370 3.238 0.778 - - - - 0.870 0.889 0.701 - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
22. slc1a2b ENSDARG00000102453 3136 3.237 0.847 0.759 - - - 0.876 0.755 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
23. stx1b ENSDARG00000000503 2724 3.233 0.738 0.779 - - - 0.933 0.783 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
24. tmem35 ENSDARG00000052567 5685 3.232 0.805 - - - 0.733 0.792 0.902 - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
25. nova1 ENSDARG00000020178 4129 3.21 - 0.778 0.842 - - 0.864 0.726 - - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
26. scn8aa ENSDARG00000005775 792 3.193 0.791 0.801 - - - 0.893 0.708 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
27. ptprnb ENSDARG00000077047 2743 3.175 0.724 0.761 - - - 0.730 0.960 - - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
28. slc32a1 ENSDARG00000059775 1092 3.161 0.795 0.761 - - - 0.862 0.743 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
29. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 3.149 0.703 - 0.846 - - 0.829 0.771 - - meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
30. amph ENSDARG00000007663 599 3.136 0.800 0.777 - - - 0.830 0.729 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
31. gng3 ENSDARG00000009553 2530 3.121 0.723 0.742 - - - 0.818 0.838 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
32. zic4 ENSDARG00000031307 1228 3.116 0.758 0.719 - - - 0.802 0.837 - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
33. mapk12b ENSDARG00000006409 2246 3.085 0.714 0.760 - - - 0.746 0.865 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
34. si:ch211-152f6.6 si:ch211-152f6.6 278 3.065 0.704 0.770 - - - 0.852 - 0.739 -
35. stmn2a ENSDARG00000033234 2272 3.042 0.808 0.751 - - - 0.740 0.743 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
36. ephb3a ENSDARG00000031548 1872 2.927 0.719 - - - 0.732 0.713 0.763 - - eph receptor B3a [Source:ZFIN;Acc:ZDB-GENE-990415-60]
37. CR548630.1 CR548630.1 3301 2.809 - - 0.972 - 0.986 0.851 - - -
38. nefma ENSDARG00000021351 790 2.663 0.790 - - - 0.997 0.876 - - - neurofilament, medium polypeptide a [Source:ZFIN;Acc:ZDB-GENE-050522-205]
39. RAB39B RAB39B 482 2.654 - - 0.994 - - 0.802 0.858 - -
40. pou2f2a ENSDARG00000019658, ENSDARG00000036816 2027 2.64 - - 0.995 - - 0.797 0.848 - - POU class 2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-060310-2]
41. UBE2QL1 ENSDARG00000079276 3474 2.625 - - - - 0.987 0.865 0.773 - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
42. marcksa ENSDARG00000004049 2518 2.623 - - - - 0.943 0.795 0.885 - - myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
43. FAM168B ENSDARG00000101733, ENSDARG00000113953, ENSDARG00000115746 2175 2.609 0.773 - - - 0.975 - 0.861 - - family with sequence similarity 168, member B [Source:ZFIN;Acc:ZDB-GENE-060929-180]
44. zic5 ENSDARG00000016022 1034 2.605 0.758 - - - 0.980 - 0.867 - - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
45. dpysl3 ENSDARG00000002587 4381 2.582 0.843 - - - - 0.921 0.818 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
46. msi1 ENSDARG00000010710 2634 2.571 - - - - 0.895 0.890 0.786 - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
47. MCTP1 MCTP1 219 2.568 - 0.747 - - - 0.900 0.921 - -
48. ckbb ENSDARG00000043257 3503 2.567 0.781 - - - - 0.924 0.862 - - creatine kinase, brain b [Source:ZFIN;Acc:ZDB-GENE-020103-2]
49. TUSC5_1 TUSC5_1 320 2.565 0.855 - - - 0.996 0.714 - - -
50. STMN3 ENSDARG00000038465 1009 2.563 0.853 - - - - 0.896 0.814 - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
51. nes ENSDARG00000088805 2710 2.55 - 0.741 - - - 0.869 0.940 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
52. MAP6 MAP6 643 2.55 0.828 0.823 - - - - 0.899 - -
53. adam23a ENSDARG00000062323 580 2.544 - 0.712 - - - 0.877 0.955 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
54. ppp1r14ab ENSDARG00000017710, ENSDARG00000110779 3296 2.534 0.885 - - - - 0.896 0.753 - - protein phosphatase 1, regulatory (inhibitor) subunit 14Ab [Source:ZFIN;Acc:ZDB-GENE-040426-1783]
55. rusc1 ENSDARG00000078125 617 2.532 0.829 - - - - 0.876 0.827 - - RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
56. syt11a ENSDARG00000057913 1145 2.531 - 0.826 - - - 0.762 0.943 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
57. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 2.531 - 0.732 - - - 0.867 0.932 - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
58. eno2 ENSDARG00000014287 2162 2.528 0.776 - - - - 0.810 0.942 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
59. slc1a3a ENSDARG00000104431 9888 2.524 0.762 - - - - 0.851 0.911 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
60. sox1a ENSDARG00000069866, ENSDARG00000110682, ENSDARG00000114571 576 2.515 - 0.742 - - 0.993 - 0.780 - - SRY (sex determining region Y)-box 1a [Source:ZFIN;Acc:ZDB-GENE-040718-186]
61. TUBB8P7 TUBB8P7 1353 2.513 0.806 0.818 - - - 0.889 - - -
62. appb ENSDARG00000055543, ENSDARG00000109552 4461 2.511 - - 0.929 - - 0.732 0.850 - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
63. onecutl ENSDARG00000040253 2143 2.504 - - 0.971 - - 0.783 0.750 - - one cut domain, family member, like [Source:ZFIN;Acc:ZDB-GENE-020531-1]
64. calm1a ENSDARG00000021811 4791 2.498 - - - - 0.898 0.894 0.706 - - calmodulin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8308]
65. scube2 ENSDARG00000037362 2833 2.498 0.721 - - - 0.942 0.835 - - - signal peptide, CUB domain, EGF-like 2 [Source:ZFIN;Acc:ZDB-GENE-050302-80]
66. her4.2 ENSDARG00000056729, ENSDARG00000094426 289 2.49 - 0.724 - - - 0.820 0.946 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
67. adcyap1b ENSDARG00000027740 1539 2.484 0.846 - - - - 0.797 0.841 - - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
68. mllt11 ENSDARG00000071026 2518 2.481 0.753 - - - - 0.872 0.856 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
69. nadl1.1 1200 2.479 - 0.740 - - - 0.841 0.898 - - neural adhesion molecule L1.1, transcript variant X1
70. tox ENSDARG00000032317 9126 2.475 - - 0.857 - - 0.770 0.848 - - thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
71. apc ENSDARG00000058868 2605 2.473 - - - - 0.973 0.792 - 0.708 - adenomatous polyposis coli [Source:ZFIN;Acc:ZDB-GENE-031112-7]
72. APBB3 ENSDARG00000053771 654 2.471 0.737 - - - - 0.885 0.849 - - amyloid beta (A4) precursor protein-binding, family B, member 3 [Source:ZFIN;Acc:ZDB-GENE-140106-53]
73. SYT2 ENSDARG00000014169 265 2.469 0.824 - - - - 0.838 0.807 - - synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
74. scn2b ENSDARG00000101713 796 2.46 - 0.777 - - - 0.809 0.874 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
75. necap1 ENSDARG00000020798 612 2.451 0.748 - - - - 0.812 0.891 - - NECAP endocytosis associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1682]
76. ATP6AP1L ATP6AP1L 164 2.45 0.762 - - - - 0.783 0.905 - -
77. cers6 ENSDARG00000053583 247 2.449 0.727 - - - - 0.829 0.893 - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
78. negr1 ENSDARG00000021607 1051 2.441 0.719 - - - - 0.874 0.848 - - neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
79. tmem59l ENSDARG00000003655 1536 2.438 0.811 - - - - 0.803 0.824 - - transmembrane protein 59-like [Source:ZFIN;Acc:ZDB-GENE-040426-2651]
80. prrt1 ENSDARG00000062208 368 2.434 0.779 - - - - 0.779 0.876 - - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
81. pcsk1nl ENSDARG00000076170 1232 2.434 - 0.803 - - - 0.753 0.878 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
82. dbx1a ENSDARG00000086393 3161 2.422 - - 0.951 - 0.709 0.762 - - - developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
83. pou4f1 ENSDARG00000005559 821 2.416 0.814 - - - - 0.777 0.825 - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
84. CHL1 CHL1 1553 2.416 - 0.803 - - - 0.847 0.766 - -
85. spock2 ENSDARG00000075393 791 2.415 0.800 - - - - 0.770 0.845 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-090312-170]
86. SNAP91 ENSDARG00000098809 556 2.415 - 0.755 - - - 0.838 0.822 - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
87. TUSC3 ENSDARG00000078854 1021 2.414 0.830 - - - - 0.725 0.859 - - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
88. GADD45G GADD45G 382 2.413 0.782 - - - - 0.755 0.876 - -
89. lhx5 ENSDARG00000057936 785 2.411 0.832 - - - - 0.785 0.794 - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
90. nrxn1a ENSDARG00000061647, ENSDARG00000111866 1069 2.41 - 0.798 - - - 0.851 0.761 - - neurexin 1a [Source:ZFIN;Acc:ZDB-GENE-070206-1]
91. nrxn3b ENSDARG00000062693 192 2.41 0.708 - - - - 0.766 0.936 - - neurexin 3b [Source:ZFIN;Acc:ZDB-GENE-070206-10]
92. nacad ENSDARG00000012347 1268 2.409 0.757 - - - - 0.828 0.824 - - NAC alpha domain containing [Source:ZFIN;Acc:ZDB-GENE-091020-7]
93. epha4b ENSDARG00000011600 3110 2.408 - - 0.708 - - 0.869 0.831 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
94. nptx1l ENSDARG00000074671 569 2.406 0.730 0.749 - - - - 0.927 - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
95. elavl4 ENSDARG00000045639 998 2.405 0.754 - - - - 0.849 0.802 - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
96. rufy3 ENSDARG00000029692 3031 2.398 - 0.732 - - - 0.854 0.812 - - RUN and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050327-58]
97. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 2.39 0.764 - - - - 0.860 0.766 - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
98. calb1 ENSDARG00000031598 252 2.39 0.754 - - - - 0.795 0.841 - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
99. tshz1 ENSDARG00000005026 1948 2.389 - - 0.725 - - 0.912 0.752 - - teashirt zinc finger homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030820-3]
100. sez6l2 ENSDARG00000076052 360 2.387 0.795 - - - - 0.765 0.827 - - seizure related 6 homolog (mouse)-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-189]

There are 2244 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA