Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lft2

Gene Name Gene ID Reads Annotation
lft2 ENSDARG00000044059 46 lefty2 [Source:ZFIN;Acc:ZDB-GENE-990630-11]










Genes with expression patterns similar to lft2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lft2 ENSDARG00000044059 46 5 - - 1.000 1.000 1.000 - - 1.000 1.000 lefty2 [Source:ZFIN;Acc:ZDB-GENE-990630-11]
2. tnnc1a ENSDARG00000011400 165 2.669 - - 0.924 0.979 - - - 0.766 - troponin C type 1a (slow) [Source:ZFIN;Acc:ZDB-GENE-030523-1]
3. hspb12 139 1.867 - - 0.887 0.980 - - - - - heat shock protein, alpha-crystallin-related, b12
4. myl7 ENSDARG00000019096 1023 1.858 - - 0.884 0.974 - - - - - myosin, light chain 7, regulatory [Source:ZFIN;Acc:ZDB-GENE-991019-3]
5. cmlc1 ENSDARG00000032976 455 1.854 - - 0.900 0.954 - - - - - cardiac myosin light chain-1 [Source:ZFIN;Acc:ZDB-GENE-030522-1]
6. rlbp1a ENSDARG00000012504 111 1.805 - - 0.848 - 0.957 - - - - retinaldehyde binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1662]
7. tnni1b ENSDARG00000052708 478 1.77 - - 0.793 0.977 - - - - - troponin I type 1b (skeletal, slow) [Source:ZFIN;Acc:ZDB-GENE-041212-37]
8. vmhc 234 1.738 - - 0.823 0.915 - - - - - ventricular myosin heavy chain
9. tnnt2a ENSDARG00000020610 313 1.687 - - 0.772 0.915 - - - - - troponin T type 2a (cardiac) [Source:ZFIN;Acc:ZDB-GENE-000626-1]
10. rx2 ENSDARG00000040321 112 1.672 - - 0.776 - 0.896 - - - - retinal homeobox gene 2 [Source:ZFIN;Acc:ZDB-GENE-990415-237]
11. rmi1 ENSDARG00000041376 674 1.665 - - - 0.726 0.939 - - - - RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-829]
12. rx1 ENSDARG00000071684 247 1.651 - - 0.896 - 0.755 - - - - retinal homeobox gene 1 [Source:ZFIN;Acc:ZDB-GENE-990415-236]
13. fhl2a ENSDARG00000042018 244 1.634 - - 0.743 0.891 - - - - - four and a half LIM domains 2a [Source:ZFIN;Acc:ZDB-GENE-040808-49]
14. gstm3 gstm3 1164 1.615 - - - 0.757 0.858 - - - -
15. col15a1b ENSDARG00000061848 398 1.57 - - - - 0.815 - - 0.755 - collagen, type XV, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-070912-689]
16. ubp1 ENSDARG00000018000 1047 1.564 - - - - 0.780 - - - 0.784 upstream binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-870]
17. eif2ak2 ENSDARG00000068729 184 1.546 - - - 0.752 0.794 - - - - eukaryotic translation initiation factor 2-alpha kinase 2 [Source:ZFIN;Acc:ZDB-GENE-080422-1]
18. CPNE8 ENSDARG00000025189 11 1 - - - - - - - 1.000 - copine VIII [Source:ZFIN;Acc:ZDB-GENE-100809-1]
19. OTOL1 OTOL1 19 0.972 - - - - - - - 0.972 -
20. chrdl2 ENSDARG00000078916 9 0.965 - - - - - - - - 0.965 chordin-like 2 [Source:ZFIN;Acc:ZDB-GENE-081104-305]
21. slc44a1a ENSDARG00000015946 10 0.965 - - - - - - - - 0.965 solute carrier family 44 (choline transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-050417-204]
22. illr3 ENSDARG00000018327 5 0.965 - - - - - - - - 0.965 immune-related, lectin-like receptor 3 [Source:ZFIN;Acc:ZDB-GENE-050311-4]
23. si:ch73-27j14.2 si:ch73-27j14.2 32 0.965 - - - - - - - - 0.965
24. greb1l_1 ENSDARG00000039196 8 0.965 - - - - - - - - 0.965 GREB1 like retinoic acid receptor coactivator [Source:ZFIN;Acc:ZDB-GENE-030131-4022]
25. slc52a3 ENSDARG00000042737 67 0.965 - - - - - - - - 0.965 solute carrier family 52 (riboflavin transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-060421-4490]
26. ftr55 ENSDARG00000009161 3 0.965 - - - - - - - - 0.965 finTRIM family, member 55 [Source:ZFIN;Acc:ZDB-GENE-070424-161]
27. ndufa4l2 153 0.965 - - - - - - - - 0.965 NDUFA4, mitochondrial complex associated like 2
28. pax6l pax6l 54 0.964 - - - - 0.964 - - - -
29. hdc ENSDARG00000075454 4 0.963 - - - - - - - - 0.963 histidine decarboxylase [Source:ZFIN;Acc:ZDB-GENE-080102-5]
30. LGALS8 LGALS8 9 0.959 - - - - - - - - 0.959
31. morn2 ENSDARG00000071360 44 0.959 - - - - - - - - 0.959 MORN repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-060825-230]
32. CABZ01012080.1 CABZ01012080.1 10 0.958 - - - - - - - - 0.958
33. pcdh1g9 ENSDARG00000057519 6 0.954 - - - - - - - - 0.954 protocadherin 1 gamma 9 [Source:ZFIN;Acc:ZDB-GENE-050609-5]
34. CABZ01059404.1 CABZ01059404.1 9 0.953 - - - - - - - - 0.953
35. SP5 SP5 8 0.952 - - - - - - - 0.952 -
36. gpr88 24 0.951 - - - - 0.951 - - - - G protein-coupled receptor 88
37. RBPMS ENSDARG00000099396 61 0.949 - - - - 0.949 - - - - RNA binding protein, mRNA processing factor [Source:ZFIN;Acc:ZDB-GENE-161017-145]
38. si:ch1073-221c23.2 si:ch1073-221c23.2 17 0.948 - - - - - - - - 0.948
39. BX005234.1 ENSDARG00000097761 3 0.945 - - - - - - - 0.945 -
40. GTPBP6 ENSDARG00000061091 29 0.945 - - - - 0.945 - - - - GTP binding protein 6 (putative) [Source:ZFIN;Acc:ZDB-GENE-031118-62]
41. zgc:158852 ENSDARG00000102076 65 0.945 - - - - 0.945 - - - - zgc:158852 [Source:ZFIN;Acc:ZDB-GENE-070112-972]
42. lppr4a lppr4a 141 0.944 - - - - - - - - 0.944
43. zgc:194210 ENSDARG00000073799, ENSDARG00000115078 100 0.943 - - - - - - - 0.943 - zgc:194210 [Source:ZFIN;Acc:ZDB-GENE-030131-2476]
44. rnh1 ENSDARG00000086631 14 0.943 - - - - - - - 0.943 - ribonuclease/angiogenin inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4718]
45. C5H11orf1 C5H11orf1 78 0.942 - - - - 0.942 - - - -
46. mir457b 21 0.942 - - - - 0.942 - - - - microRNA 457b
47. cep57l1 ENSDARG00000002826 521 0.94 - - - - 0.940 - - - - centrosomal protein 57, like 1 [Source:ZFIN;Acc:ZDB-GENE-040808-27]
48. CR382327.1 ENSDARG00000088739 56 0.939 - - - - - - - 0.939 -
49. supt3h ENSDARG00000098141 18 0.939 - - - - - - - - 0.939 SPT3 homolog, SAGA and STAGA complex component [Source:ZFIN;Acc:ZDB-GENE-040718-370]
50. WIPF1 WIPF1 32 0.939 - - - - 0.939 - - - -
51. zgc:173709 86 0.938 - - - - 0.938 - - - - zgc:173709
52. fgfbp2 fgfbp2 14 0.938 - - - - - - - 0.938 -
53. CU694256.1 ENSDARG00000097007 290 0.938 - - - - 0.938 - - - -
54. shank2 ENSDARG00000062325 66 0.937 - - - - 0.937 - - - - SH3 and multiple ankyrin repeat domains 2 [Source:ZFIN;Acc:ZDB-GENE-061207-58]
55. slc16a6a ENSDARG00000102793 60 0.936 - - - - 0.936 - - - - solute carrier family 16, member 6a [Source:ZFIN;Acc:ZDB-GENE-110208-1]
56. si:dkey-14d8.9 si:dkey-14d8.9 66 0.936 - - - - 0.936 - - - -
57. csrp3 ENSDARG00000101706 21 0.936 - - - 0.936 - - - - - cysteine and glycine-rich protein 3 (cardiac LIM protein) [Source:ZFIN;Acc:ZDB-GENE-041010-119]
58. wfikkn2b ENSDARG00000059139 45 0.935 - - - - 0.935 - - - - WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-110414-1]
59. MAP4K2 ENSDARG00000001234 39 0.935 - - - - 0.935 - - - - mitogen-activated protein kinase kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030616-163]
60. fam45a ENSDARG00000062965, ENSDARG00000115900 14 0.934 - - - - - - - - 0.934 family with sequence similarity 45, member A [Source:ZFIN;Acc:ZDB-GENE-030131-3548]
61. si:dkey-102m7.3 ENSDARG00000100366 27 0.934 - - - - 0.934 - - - - si:dkey-102m7.3 [Source:ZFIN;Acc:ZDB-GENE-091204-389]
62. DTX3 DTX3 303 0.932 - - - - 0.932 - - - -
63. hoxa4a 37 0.93 - - - - - - - - 0.930 homeobox A4a, transcript variant X4
64. nlgn3b ENSDARG00000062376 171 0.929 - - - - 0.929 - - - - neuroligin 3b [Source:ZFIN;Acc:ZDB-GENE-060526-197]
65. KHDRBS3 ENSDARG00000101020 408 0.929 - - - - 0.929 - - - - KH RNA binding domain containing, signal transduction associated 3 [Source:HGNC Symbol;Acc:HGNC:18117]
66. fstl3 ENSDARG00000025670 41 0.929 - - - - - - - - 0.929 follistatin-like 3 (secreted glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-050913-111]
67. mafb ENSDARG00000076520 139 0.928 - - - - 0.928 - - - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog b (paralog b) [Source:ZFIN;Acc:ZDB-GENE-141211-38]
68. ddx26b 79 0.926 - - - - 0.926 - - - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B, transcript variant X1
69. zgc:172128 ENSDARG00000101883, ENSDARG00000104208 28 0.925 - - - - - - - - 0.925 zgc:172128 [Source:ZFIN;Acc:ZDB-GENE-080220-2]
70. si:ch211-110p13.9 ENSDARG00000093821 82 0.924 - - - - 0.924 - - - - si:ch211-110p13.9 [Source:ZFIN;Acc:ZDB-GENE-060526-9]
71. s100s ENSDARG00000036773 90 0.921 - - - - - - - 0.921 - S100 calcium binding protein S [Source:ZFIN;Acc:ZDB-GENE-040822-31]
72. smyd4 ENSDARG00000060983 106 0.921 - - - - 0.921 - - - - SET and MYND domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-248]
73. nsmce4a ENSDARG00000024311 125 0.921 - - - - 0.921 - - - - NSE4 homolog A, SMC5-SMC6 complex component [Source:ZFIN;Acc:ZDB-GENE-050522-111]
74. foxd1 ENSDARG00000029179 726 0.918 - - - - 0.918 - - - - forkhead box D1 [Source:ZFIN;Acc:ZDB-GENE-040426-2094]
75. FBF1 FBF1 13 0.918 - - - - - - - - 0.918
76. trhrb ENSDARG00000036159 11 0.918 - - - - - - - - 0.918 thyrotropin-releasing hormone receptor b [Source:ZFIN;Acc:ZDB-GENE-060503-382]
77. CR450842.1 CR450842.1 129 0.916 - - - - 0.916 - - - -
78. rapgef5a ENSDARG00000075271 282 0.916 - - - - 0.916 - - - - Rap guanine nucleotide exchange factor (GEF) 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7681]
79. lrrc32 ENSDARG00000040621 348 0.915 - - - - 0.915 - - - - leucine rich repeat containing 32 [Source:ZFIN;Acc:ZDB-GENE-090630-1]
80. CR352265.1 ENSDARG00000062758 39 0.914 - - - - - - - 0.914 -
81. TMEM150A_1 TMEM150A_1 90 0.914 - - - - 0.914 - - - -
82. SMC6 ENSDARG00000091821 165 0.913 - - - - 0.913 - - - - structural maintenance of chromosomes 6 [Source:ZFIN;Acc:ZDB-GENE-110303-1]
83. ponzr3 ENSDARG00000088589, ENSDARG00000116407 1373 0.913 - - - - 0.913 - - - - plac8 onzin related protein 3 [Source:ZFIN;Acc:ZDB-GENE-050506-38]
84. PLXNB2 PLXNB2 99 0.913 - - - - 0.913 - - - -
85. arpc5la ENSDARG00000041720 143 0.909 - - - - 0.909 - - - - actin related protein 2/3 complex, subunit 5-like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1453]
86. stm ENSDARG00000035694 1567 0.906 - - - - - - - 0.906 - starmaker [Source:ZFIN;Acc:ZDB-GENE-031112-4]
87. si:ch211-80h18.1 ENSDARG00000078522 1941 0.905 - - - - - - - 0.905 - si:ch211-80h18.1 [Source:ZFIN;Acc:ZDB-GENE-070705-257]
88. setd6 ENSDARG00000043986, ENSDARG00000113991 194 0.905 - - - - 0.905 - - - - SET domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-1067]
89. cpn1_2 ENSDARG00000005185, ENSDARG00000096728 14 0.905 - - - - - - - - 0.905 carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
90. mkrn2 ENSDARG00000007630 127 0.903 - - - - 0.903 - - - - makorin, ring finger protein, 2 [Source:ZFIN;Acc:ZDB-GENE-020213-2]
91. atmin ENSDARG00000068601 24 0.902 - - - - - - - - 0.902 ATM interactor [Source:ZFIN;Acc:ZDB-GENE-030616-220]
92. si:ch73-44m9.2 ENSDARG00000094821 101 0.901 - - - - 0.901 - - - - si:ch73-44m9.2 [Source:ZFIN;Acc:ZDB-GENE-081031-72]
93. si:ch211-190k17.31 si:ch211-190k17.31 29 0.901 - - - 0.901 - - - - -
94. ACBD3 ENSDARG00000042623 159 0.901 - - - - 0.901 - - - - acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
95. GPN1 ENSDARG00000043928 566 0.9 - - - - 0.900 - - - - GPN-loop GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-154]
96. tgm5l ENSDARG00000098837 174 0.9 - - - - 0.900 - - - - transglutaminase 5, like [Source:ZFIN;Acc:ZDB-GENE-110411-176]
97. deptor ENSDARG00000040930 191 0.9 - - - - 0.900 - - - - DEP domain containing MTOR-interacting protein [Source:ZFIN;Acc:ZDB-GENE-061013-453]
98. CR974475.1 ENSDARG00000099094 6 0.9 - - - - - - - - 0.900
99. nkx2.7 ENSDARG00000021232 38 0.899 - - - - - - - 0.899 - NK2 transcription factor related 7 [Source:ZFIN;Acc:ZDB-GENE-990415-179]
100. fancc ENSDARG00000055232, ENSDARG00000116499 50 0.896 - - - - - - - - 0.896 FA complementation group C [Source:ZFIN;Acc:ZDB-GENE-060510-2]

There are 503 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA