Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lft1

Gene Name Gene ID Reads Annotation
lft1 ENSDARG00000019920 66 lefty1 [Source:ZFIN;Acc:ZDB-GENE-990630-10]










Genes with expression patterns similar to lft1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lft1 ENSDARG00000019920 66 7 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 - lefty1 [Source:ZFIN;Acc:ZDB-GENE-990630-10]
2. si:dkey-15h19.3 si:dkey-15h19.3 5 1.86 - 0.860 - - - - 1.000 - -
3. npnt ENSDARG00000018721 19 1.835 - - 0.835 - - - 1.000 - - nephronectin [Source:ZFIN;Acc:ZDB-GENE-090312-201]
4. RP1L1 RP1L1 15 1.814 - 0.860 - - - - 0.954 - -
5. si:dkey-20i20.12 si:dkey-20i20.12 7 1.785 0.925 0.860 - - - - - - -
6. lsm14b ENSDARG00000025386 23 1.747 0.887 0.860 - - - - - - - LSM family member 14B [Source:ZFIN;Acc:ZDB-GENE-040426-779]
7. ccdc41 ccdc41 97 1.741 - 0.741 - - - - 1.000 - -
8. hydin ENSDARG00000056764, ENSDARG00000114934 16 1.739 - 0.739 - - - - 1.000 - - HYDIN, axonemal central pair apparatus protein [Source:ZFIN;Acc:ZDB-GENE-050419-219]
9. CU855821.2 CU855821.2 21 1.736 0.925 - - - - - 0.811 - -
10. C20H2orf70 C20H2orf70 8 1.736 - - - - - - 1.000 0.736 -
11. mxe ENSDARG00000014427 6 1.719 - 0.860 - - - - 0.859 - - myxovirus (influenza virus) resistance E [Source:ZFIN;Acc:ZDB-GENE-030131-9609]
12. slc4a4b ENSDARG00000044808 9 1.716 - 0.716 - - - - 1.000 - - solute carrier family 4 (sodium bicarbonate cotransporter), member 4b [Source:ZFIN;Acc:ZDB-GENE-091030-1]
13. ADAP2 ENSDARG00000070565 29 1.704 - - 0.874 - - - 0.830 - - ArfGAP with dual PH domains 2 [Source:ZFIN;Acc:ZDB-GENE-070912-21]
14. nrros ENSDARG00000071491, ENSDARG00000112102 64 1.691 - - 0.780 - - - 0.911 - - negative regulator of reactive oxygen species [Source:ZFIN;Acc:ZDB-GENE-040808-36]
15. psma6l ENSDARG00000043899 3 1.671 - 0.860 - - - - 0.811 - - proteasome subunit alpha 6, like [Source:ZFIN;Acc:ZDB-GENE-010502-2]
16. si:dkey-261e22.5 si:dkey-261e22.5 68 1.668 0.796 0.872 - - - - - - -
17. fto ENSDARG00000044216 33 1.641 0.925 0.716 - - - - - - - fat mass and obesity associated [Source:ZFIN;Acc:ZDB-GENE-061108-1]
18. avpr1b avpr1b 58 1.638 0.925 - - - - - 0.713 - -
19. si:dkey-5n7.2 ENSDARG00000102339 42 1.634 0.925 0.709 - - - - - - - si:dkey-5n7.2 [Source:ZFIN;Acc:ZDB-GENE-050420-254]
20. tmc1 23 1.63 0.770 0.860 - - - - - - - transmembrane channel-like 1, transcript variant X1
21. sh3bp2 ENSDARG00000021982 61 1.596 - 0.741 - - - - 0.855 - - SH3-domain binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-091204-268]
22. si:dkey-162b3.5 si:dkey-162b3.5 24 1.596 0.847 - - - - - - 0.749 -
23. il17d ENSDARG00000010700, ENSDARG00000115462 102 1.595 0.758 - - - - - 0.837 - - interleukin 17d [Source:ZFIN;Acc:ZDB-GENE-061031-4]
24. fastkd3 ENSDARG00000100440 144 1.593 - 0.857 - - - - 0.736 - - FAST kinase domains 3 [Source:ZFIN;Acc:ZDB-GENE-050208-273]
25. si:ch211-161h7.5 ENSDARG00000093044 12 1.591 - 0.761 - - - - 0.830 - - si:ch211-161h7.5 [Source:ZFIN;Acc:ZDB-GENE-091204-265]
26. pde3a ENSDARG00000004227 6 1.587 0.851 - - - - - - 0.736 - phosphodiesterase 3A, cGMP-inhibited [Source:ZFIN;Acc:ZDB-GENE-041210-23]
27. eng1b eng1b 2544 1.575 0.709 0.866 - - - - - - -
28. SDR42E2 ENSDARG00000059914 132 1.573 0.717 0.856 - - - - - - - short chain dehydrogenase/reductase family 42E, member 2 [Source:ZFIN;Acc:ZDB-GENE-101203-3]
29. slc6a19a slc6a19a 41 1.547 0.736 - - - - - 0.811 - -
30. U1_33 U1_33 76 1.536 - 0.725 - - - - 0.811 - -
31. BX465203.3 BX465203.3 178 1.514 - - 0.728 - - - 0.786 - -
32. adra2da ENSDARG00000091277 173 1.506 0.776 0.730 - - - - - - - adrenergic, alpha-2D-, receptor a [Source:ZFIN;Acc:ZDB-GENE-021010-4]
33. si:ch1073-155h21.1 ENSDARG00000007582 137 1.499 - - 0.763 - - - - 0.736 - si:ch1073-155h21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-2664]
34. kcnj11 ENSDARG00000051880, ENSDARG00000114565 211 1.489 - 0.705 - - - - 0.784 - - potassium inwardly-rectifying channel, subfamily J, member 11 [Source:ZFIN;Acc:ZDB-GENE-060308-2]
35. SURF2 ENSDARG00000112476 592 1.483 0.716 0.767 - - - - - - - surfeit 2 [Source:ZFIN;Acc:ZDB-GENE-040801-86]
36. BX323793.1 ENSDARG00000104134 24 1.452 - 0.716 - - - - - 0.736 - 1-phosphatidylinositol phosphodiesterase-like [Source:NCBI gene;Acc:100331378]
37. mhc1uma ENSDARG00000039164 16 1.449 - - - - - - 0.713 0.736 - major histocompatibility complex class I UMA [Source:ZFIN;Acc:ZDB-GENE-140820-1]
38. si:rp71-84d19.2 si:rp71-84d19.2 34 1.443 - - 0.705 - - - 0.738 - -
39. si:ch211-279m15.1 si:ch211-279m15.1 67 1.424 - - 0.711 - - - 0.713 - -
40. B2M ENSDARG00000053136 2 1 - - - - - - 1.000 - - beta-2-microglobulin [Source:ZFIN;Acc:ZDB-GENE-980526-88]
41. LRRC41 LRRC41 11 1 - - - - - - 1.000 - -
42. C1GALT1_1 C1GALT1_1 1 1 - - - - - - 1.000 - -
43. FP325123.1_1 ENSDARG00000105359 38 1 - - - - - - 1.000 - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
44. SH2D1B SH2D1B 60 1 - - - - - - 1.000 - -
45. si:dkey-91f15.8 18 1 - - - - - - 1.000 - - si:dkey-91f15.8, transcript variant X1
46. zzef1 ENSDARG00000094380 4 1 - - - - - - 1.000 - - zinc finger, ZZ-type with EF hand domain 1 [Source:ZFIN;Acc:ZDB-GENE-041222-2]
47. kcnh4 kcnh4 6 1 - - - - - - 1.000 - -
48. CABZ01006835.1 CABZ01006835.1 92 1 - - - - - - 1.000 - -
49. si:ch211-260m19.8 si:ch211-260m19.8 33 1 - - - - - - 1.000 - -
50. rs1 rs1 70 1 - - - - - - 1.000 - -
51. gpr55a ENSDARG00000043447 12 1 - - - - - - 1.000 - - G protein-coupled receptor 55a [Source:ZFIN;Acc:ZDB-GENE-051113-260]
52. mir15a-1 36 1 - - - - - - 1.000 - - microRNA 15a-1
53. TRIM35_5 TRIM35_5 1 1 - - - - - - 1.000 - -
54. si:dkey-78o7.3 ENSDARG00000100387 59 1 - - - - - - 1.000 - - si:dkey-78o7.3 [Source:ZFIN;Acc:ZDB-GENE-120709-79]
55. inppl1b ENSDARG00000001442 41 1 1.000 - - - - - - - - inositol polyphosphate phosphatase-like 1b [Source:ZFIN;Acc:ZDB-GENE-030616-75]
56. fgl2 fgl2 9 1 - - - - - - 1.000 - -
57. SH3RF2 ENSDARG00000101178 0 1 - - - - - - 1.000 - - SH3 domain containing ring finger 2 [Source:ZFIN;Acc:ZDB-GENE-141212-301]
58. prkacbb_1 ENSDARG00000059125 83 1 - - - - - - 1.000 - - protein kinase, cAMP-dependent, catalytic, beta b [Source:ZFIN;Acc:ZDB-GENE-050904-4]
59. wu:fb64b08 wu:fb64b08 8 1 - - - - - - 1.000 - -
60. man2a1 ENSDARG00000102200 12 1 - - - - - - 1.000 - - mannosidase, alpha, class 2A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060526-31]
61. ENSDARG00000088134 ENSDARG00000088134 16 1 - - - - - - 1.000 - -
62. si:dkey-125h23.1 si:dkey-125h23.1 23 1 - - - - - - 1.000 - -
63. zgc:66473_1 ENSDARG00000087289, ENSDARG00000087375 1 1 - - - - - - 1.000 - - zgc:66473 [Source:ZFIN;Acc:ZDB-GENE-030131-5708]
64. OMA1 ENSDARG00000090503 19 1 - - - - - - 1.000 - - OMA1 zinc metallopeptidase [Source:ZFIN;Acc:ZDB-GENE-091204-124]
65. si:dkeyp-80d11.1 ENSDARG00000101087 91 1 - - - - - - 1.000 - - si:dkeyp-80d11.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4126]
66. zgc:158856 zgc:158856 23 1 - - - - - - 1.000 - -
67. psme2 ENSDARG00000033144 3 1 - - - - - - 1.000 - - proteasome activator subunit 2 [Source:ZFIN;Acc:ZDB-GENE-991110-16]
68. TP53I3 60 1 - - - - - - 1.000 - - tumor protein p53 inducible protein 3, transcript variant X1
69. zgc:195170 ENSDARG00000076264 3 1 - - - - - - 1.000 - - zgc:195170 [Source:ZFIN;Acc:ZDB-GENE-080723-62]
70. ftr06 ENSDARG00000018506, ENSDARG00000053450 17 1 - - - - - - 1.000 - - finTRIM family, member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-228]
71. BX569789.2 BX569789.2 12 1 - - - - - - 1.000 - -
72. si:ch211-176g6.2 ENSDARG00000079791 4 1 - - - - - - 1.000 - - si:ch211-176g6.2 [Source:ZFIN;Acc:ZDB-GENE-121214-224]
73. CKMT2 CKMT2 10 1 - - - - - - 1.000 - -
74. AHSG AHSG 3 1 - - - - - - 1.000 - -
75. si:ch73-36i7.2 si:ch73-36i7.2 5 1 - - - - - - 1.000 - -
76. si:dkey-88e10.2 si:dkey-88e10.2 7 1 - - - - - - 1.000 - -
77. si:dkey-10g2.5 si:dkey-10g2.5 72 1 - - - - - - 1.000 - -
78. NWD1 ENSDARG00000076110 3 1 - - - - - - 1.000 - - NACHT and WD repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-071116-8]
79. dync1i2a ENSDARG00000078386 53 1 - - - - - - 1.000 - - dynein, cytoplasmic 1, intermediate chain 2a [Source:ZFIN;Acc:ZDB-GENE-060929-1086]
80. BX664622.2 BX664622.2 1 1 - - - - - - 1.000 - -
81. si:ch211-278p7.5 si:ch211-278p7.5 0 1 - - - - - - 1.000 - -
82. zgc:66432 zgc:66432 16 1 - - - - - - 1.000 - -
83. TNFRSF14 TNFRSF14 330 1 - - - - - - 1.000 - -
84. gatsl3 7 1 - - - - - - 1.000 - - GATS protein-like 3
85. CR356223.1 ENSDARG00000093865 1 1 - - - - - - 1.000 - -
86. si:dkey-222o15.3 si:dkey-222o15.3 3 1 - - - - - - 1.000 - -
87. si:dkey-9i5.4 si:dkey-9i5.4 14 1 - - - - - - 1.000 - -
88. si:ch211-231i17.4 ENSDARG00000094903 2 1 - - - - - - 1.000 - - si:ch211-231i17.4 [Source:ZFIN;Acc:ZDB-GENE-110914-104]
89. CR847844.5 CR847844.5 5 1 - - - - - - 1.000 - -
90. si:dkeyp-85d8.4 si:dkeyp-85d8.4 1 1 - - - - - - 1.000 - -
91. si:dkey-208k22.2 si:dkey-208k22.2 9 1 - - - - - - 1.000 - -
92. cryba1l1 ENSDARG00000032929 1868 1 - - - - - - 1.000 - - crystallin, beta A1, like 1 [Source:ZFIN;Acc:ZDB-GENE-050417-249]
93. loxhd1a ENSDARG00000094738 7 1 - - - - - - 1.000 - - lipoxygenase homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-091112-20]
94. fosl1a ENSDARG00000015355 139 1 - - - - - - 1.000 - - FOS-like antigen 1a [Source:ZFIN;Acc:ZDB-GENE-061207-7]
95. cd8a ENSDARG00000044797 7 1 - - - - - - 1.000 - - CD8a molecule [Source:ZFIN;Acc:ZDB-GENE-060210-2]
96. si:dkey-26g8.5 ENSDARG00000089750 7070 1 - - - - - - 1.000 - - si:dkey-26g8.5 [Source:ZFIN;Acc:ZDB-GENE-121214-19]
97. RBBP6_6 RBBP6_6 1 1 - - - - - - 1.000 - -
98. si:dkey-37m8.8 si:dkey-37m8.8 1 1 - - - - - - 1.000 - -
99. CYTH4 CYTH4 2 1 - - - - - - 1.000 - -
100. si:dkey-85n7.8 ENSDARG00000095793 31 1 - - - - - - 1.000 - - si:dkey-85n7.8 [Source:ZFIN;Acc:ZDB-GENE-110411-127]

There are 888 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA