Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for letm2

Gene Name Gene ID Reads Annotation
letm2 ENSDARG00000077515 9561 leucine zipper-EF-hand containing transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-090521-4]










Genes with expression patterns similar to letm2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. letm2 ENSDARG00000077515 9561 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 leucine zipper-EF-hand containing transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-090521-4]
2. mpdu1a ENSDARG00000035562, ENSDARG00000109966 1169 2.511 - - - - - 0.792 0.786 0.933 - mannose-P-dolichol utilization defect 1a [Source:ZFIN;Acc:ZDB-GENE-040912-9]
3. xbp1 ENSDARG00000035622 18416 2.463 - - - - - - 0.761 0.712 0.990 X-box binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-011210-2]
4. itm2bb ENSDARG00000041505 2734 2.266 0.777 - - - - - 0.752 0.737 - integral membrane protein 2Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2139]
5. osbpl9 ENSDARG00000069298 2730 2.214 - - 0.726 - - 0.731 0.757 - - oxysterol binding protein-like 9 [Source:ZFIN;Acc:ZDB-GENE-061110-103]
6. cebpb ENSDARG00000042725 3921 1.763 - - - - - - 0.828 0.935 - CCAAT enhancer binding protein beta [Source:ZFIN;Acc:ZDB-GENE-020111-3]
7. BX649554.3_1 BX649554.3_1 1071 1.756 - - - 0.875 - - - 0.881 -
8. zbtb10 ENSDARG00000077101 8683 1.725 - - - - - - 0.725 - 1.000 zinc finger and BTB domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030429-10]
9. prelid1a ENSDARG00000098671 4745 1.716 - - - - - 0.853 - 0.863 - PRELI domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1341]
10. atp6v1f ENSDARG00000045543 3445 1.71 - - - - - 0.787 - 0.923 - ATPase H+ transporting V1 subunit F [Source:ZFIN;Acc:ZDB-GENE-040718-259]
11. stox2a ENSDARG00000070162 1620 1.699 - 0.787 - - - - - 0.912 - storkhead box 2a [Source:ZFIN;Acc:ZDB-GENE-090313-101]
12. gpx4b ENSDARG00000076836 8085 1.697 - - - - - - 0.783 0.914 - glutathione peroxidase 4b [Source:ZFIN;Acc:ZDB-GENE-030410-3]
13. pir ENSDARG00000056638 722 1.693 - 0.760 - - - - - 0.933 - pirin [Source:ZFIN;Acc:ZDB-GENE-040718-288]
14. ifi30 ENSDARG00000056378, ENSDARG00000112359 2472 1.685 0.766 - - - - - - 0.919 - interferon, gamma-inducible protein 30 [Source:ZFIN;Acc:ZDB-GENE-030131-8447]
15. arpc1a ENSDARG00000008383 7353 1.672 - - - - - - 0.791 0.881 - actin related protein 2/3 complex, subunit 1A [Source:ZFIN;Acc:ZDB-GENE-040116-1]
16. adka ENSDARG00000039429 7670 1.667 - - - - - 0.760 0.907 - - adenosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030425-3]
17. elovl6l ENSDARG00000038639 1184 1.663 0.756 - - - - - - 0.907 - ELOVL family member 6, elongation of long chain fatty acids like [Source:ZFIN;Acc:ZDB-GENE-031110-3]
18. map3k1 ENSDARG00000098405 3043 1.658 - 0.777 - - - - - 0.881 - mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-090313-412]
19. coro7 ENSDARG00000089616 2141 1.655 - - - - - - 0.764 0.891 - coronin 7 [Source:ZFIN;Acc:ZDB-GENE-050706-137]
20. micu2 ENSDARG00000009939 557 1.647 - - - 0.887 - - 0.760 - - mitochondrial calcium uptake 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3374]
21. SMIM19 ENSDARG00000037423, ENSDARG00000110214 886 1.643 - - - 0.729 - - - 0.914 - small integral membrane protein 19 [Source:ZFIN;Acc:ZDB-GENE-050913-125]
22. vps4b ENSDARG00000069175 1922 1.64 - - - - - - 0.712 0.928 - vacuolar protein sorting 4b homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1235]
23. gabarapl2 ENSDARG00000027200 5120 1.635 - - - - - - 0.726 0.909 - GABA(A) receptor-associated protein like 2 [Source:ZFIN;Acc:ZDB-GENE-040718-336]
24. srebf2 ENSDARG00000063438 1982 1.635 - - - - - - 0.718 0.917 - sterol regulatory element binding transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-070410-8]
25. si:dkey-3h3.3 ENSDARG00000067718 225 1.628 - 0.705 - - - - - 0.923 - si:dkey-3h3.3 [Source:ZFIN;Acc:ZDB-GENE-060526-299]
26. rnf13 ENSDARG00000019438 1560 1.626 0.769 - - 0.857 - - - - - ring finger protein 13 [Source:ZFIN;Acc:ZDB-GENE-040426-772]
27. serpinh1a ENSDARG00000075954 6488 1.617 - - - - - - 0.798 0.819 - serpin peptidase inhibitor, clade H (heat shock protein 47), member 1a [Source:ZFIN;Acc:ZDB-GENE-080219-21]
28. angptl7 ENSDARG00000027582, ENSDARG00000110344 1574 1.606 - - - 0.850 - - - 0.756 - angiopoietin-like 7 [Source:ZFIN;Acc:ZDB-GENE-041010-175]
29. shmt1 ENSDARG00000052816 5463 1.605 - - - - - 0.716 - 0.889 - serine hydroxymethyltransferase 1 (soluble) [Source:ZFIN;Acc:ZDB-GENE-040426-1558]
30. s100z ENSDARG00000038729 442 1.597 - - - 0.829 - - 0.768 - - S100 calcium binding protein Z [Source:ZFIN;Acc:ZDB-GENE-050522-69]
31. si:ch211-218d20.13 si:ch211-218d20.13 5488 1.596 - 0.729 - - - - - 0.867 -
32. atp6v1h ENSDARG00000006370 7028 1.593 - - - - - 0.716 - 0.877 - ATPase H+ transporting V1 subunit H [Source:ZFIN;Acc:ZDB-GENE-021219-2]
33. nr2f6b ENSDARG00000003165 5855 1.58 - - - 0.703 - - - 0.877 - nuclear receptor subfamily 2, group F, member 6b [Source:ZFIN;Acc:ZDB-GENE-040426-2351]
34. sept8a ENSDARG00000032606 2737 1.576 0.828 - - - - 0.748 - - - septin 8a [Source:ZFIN;Acc:ZDB-GENE-030131-309]
35. tax1bp1b ENSDARG00000056856 4526 1.569 - - - - - 0.805 0.764 - - Tax1 (human T-cell leukemia virus type I) binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2872]
36. sidt2 ENSDARG00000045976 1997 1.566 - - - - - 0.772 0.794 - - SID1 transmembrane family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7356]
37. tmem9b ENSDARG00000025693 2693 1.565 - - - - - 0.857 0.708 - - TMEM9 domain family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-4656]
38. mpv17 ENSDARG00000032431 1225 1.56 0.766 - - - - - 0.794 - - MpV17 mitochondrial inner membrane protein [Source:ZFIN;Acc:ZDB-GENE-040426-1168]
39. sesn3 ENSDARG00000015822 5328 1.56 - - - - - 0.763 0.797 - - sestrin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2924]
40. chmp1a ENSDARG00000102643 1078 1.559 - - - 0.839 - 0.720 - - - charged multivesicular body protein 1A [Source:ZFIN;Acc:ZDB-GENE-040426-1474]
41. mntb ENSDARG00000073988 1023 1.558 - - - 0.858 - 0.700 - - - MAX network transcriptional repressor b [Source:ZFIN;Acc:ZDB-GENE-070820-8]
42. CABZ01092303.1 CABZ01092303.1 8825 1.554 0.716 - - - - - 0.838 - -
43. lgals2b ENSDARG00000038153 2196 1.547 - - - - - - 0.736 0.811 - lectin, galactoside-binding, soluble, 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1590]
44. atp6v1ba ENSDARG00000013443, ENSDARG00000111525 6645 1.546 - - - - - 0.761 0.785 - - ATPase, H+ transporting, lysosomal, V1 subunit B, member a [Source:ZFIN;Acc:ZDB-GENE-030711-3]
45. mfsd5 ENSDARG00000015997 570 1.545 - - - 0.836 - - 0.709 - - major facilitator superfamily domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040718-468]
46. si:dkey-95p16.2 ENSDARG00000093484 3413 1.544 - - - 0.814 - 0.730 - - - si:dkey-95p16.2 [Source:ZFIN;Acc:ZDB-GENE-081105-65]
47. si:ch211-214j24.10 ENSDARG00000045847 5145 1.542 - - - - - 0.784 0.758 - - si:ch211-214j24.10 [Source:ZFIN;Acc:ZDB-GENE-030131-6301]
48. atp6v0ca ENSDARG00000057853 23277 1.541 - - - - - 0.725 0.816 - - ATPase H+ transporting V0 subunit ca [Source:ZFIN;Acc:ZDB-GENE-020419-23]
49. aldh4a1 ENSDARG00000038207 4639 1.539 - - - - - 0.770 0.769 - - aldehyde dehydrogenase 4 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-040426-1179]
50. bckdk ENSDARG00000016904 3775 1.534 0.816 0.718 - - - - - - - branched chain ketoacid dehydrogenase kinase [Source:ZFIN;Acc:ZDB-GENE-021204-1]
51. exosc1 ENSDARG00000059841 6895 1.525 - - - - - 0.761 0.764 - - exosome component 1 [Source:ZFIN;Acc:ZDB-GENE-080926-3]
52. gclc ENSDARG00000013095 2146 1.522 - - - 0.792 - - 0.730 - - glutamate-cysteine ligase, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-030131-5056]
53. morc3a ENSDARG00000056679 648 1.52 - 0.799 - - - - 0.721 - - MORC family CW-type zinc finger 3a [Source:ZFIN;Acc:ZDB-GENE-030131-1502]
54. gramd1a ENSDARG00000076689 1148 1.516 - - - 0.762 - - 0.754 - - GRAM domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-060503-688]
55. pcbd1 ENSDARG00000031981 3373 1.516 - - - - - 0.806 0.710 - - pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha [Source:ZFIN;Acc:ZDB-GENE-040426-1787]
56. tecra ENSDARG00000101585 609 1.514 - 0.717 - - - - 0.797 - - trans-2,3-enoyl-CoA reductase a [Source:ZFIN;Acc:ZDB-GENE-090930-1]
57. mcm3ap ENSDARG00000021402 1271 1.51 - 0.801 - - - - 0.709 - - minichromosome maintenance complex component 3 associated protein [Source:ZFIN;Acc:ZDB-GENE-040715-1]
58. cpne3 ENSDARG00000104177, ENSDARG00000109906, ENSDARG00000110868 1084 1.51 - 0.734 - - - 0.776 - - - copine III [Source:ZFIN;Acc:ZDB-GENE-040426-763]
59. col6a2 ENSDARG00000061436 5063 1.506 - 0.775 - - - 0.731 - - - collagen, type VI, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-070501-7]
60. C8H9orf116 C8H9orf116 379 1.505 - 0.719 - 0.786 - - - - -
61. huwe1 ENSDARG00000016782 6493 1.501 - - - - - 0.744 0.757 - - HECT, UBA and WWE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081104-387]
62. naga ENSDARG00000099313 2483 1.501 - - - 0.761 - - 0.740 - - N-acetylgalactosaminidase, alpha [Source:ZFIN;Acc:ZDB-GENE-051113-256]
63. setd5 ENSDARG00000078576 1974 1.499 0.782 - - - - - 0.717 - - SET domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080523-1]
64. copg2 ENSDARG00000034823 4162 1.495 0.701 - - - - - 0.794 - - coatomer protein complex, subunit gamma 2 [Source:ZFIN;Acc:ZDB-GENE-000208-8]
65. ptplb ptplb 6135 1.494 - - - - - 0.730 0.764 - -
66. atp6v0b ENSDARG00000031681 4611 1.493 - - - - - 0.705 0.788 - - ATPase H+ transporting V0 subunit b [Source:ZFIN;Acc:ZDB-GENE-030131-443]
67. CU915738.1 CU915738.1 3723 1.491 - - - - - - 0.708 0.783 -
68. atp2b1a ENSDARG00000012684 4673 1.488 - - - - - 0.765 0.723 - - ATPase plasma membrane Ca2+ transporting 1a [Source:ZFIN;Acc:ZDB-GENE-030925-29]
69. tinagl1 ENSDARG00000061231 2677 1.488 - - - - - 0.735 0.753 - - tubulointerstitial nephritis antigen-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-240]
70. ankrd54 ENSDARG00000055743 1575 1.487 - - - - - 0.771 0.716 - - ankyrin repeat domain 54 [Source:ZFIN;Acc:ZDB-GENE-040718-318]
71. dnajc5gb ENSDARG00000017687, ENSDARG00000111738 855 1.487 - 0.762 - - - 0.725 - - - DnaJ (Hsp40) homolog, subfamily C, member 5 gamma b [Source:ZFIN;Acc:ZDB-GENE-040426-1238]
72. mical1 ENSDARG00000011809 586 1.486 - 0.754 - - - 0.732 - - - microtubule associated monooxygenase, calponin and LIM domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081022-3]
73. CABZ01101003.1 CABZ01101003.1 858 1.484 - 0.706 - - - - 0.778 - -
74. nt5c3a ENSDARG00000058597 14299 1.484 - - - - - 0.780 0.704 - - 5'-nucleotidase, cytosolic IIIA [Source:ZFIN;Acc:ZDB-GENE-030131-439]
75. cyp2aa4 ENSDARG00000098803 1762 1.484 0.774 - - - - - 0.710 - - cytochrome P450, family 2, subfamily AA, polypeptide 4 [Source:ZFIN;Acc:ZDB-GENE-040625-72]
76. b4galt1 ENSDARG00000002634 1076 1.483 - - - 0.781 - - 0.702 - - UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-050417-236]
77. lypd6 ENSDARG00000004307 233 1.483 - 0.731 - - - - 0.752 - - LY6/PLAUR domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-040912-117]
78. gpm6ab ENSDARG00000004621 5825 1.483 0.731 - - - - - 0.752 - - glycoprotein M6Ab [Source:ZFIN;Acc:ZDB-GENE-030710-8]
79. copz1 ENSDARG00000017844 7277 1.483 - - - - - 0.758 0.725 - - coatomer protein complex, subunit zeta 1 [Source:ZFIN;Acc:ZDB-GENE-000406-6]
80. akap7 ENSDARG00000043843 3596 1.481 - - - - - 0.718 0.763 - - A kinase (PRKA) anchor protein 7 [Source:ZFIN;Acc:ZDB-GENE-040724-128]
81. nmt1a ENSDARG00000052966 5918 1.479 - - - - - 0.725 - 0.754 - N-myristoyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-050522-477]
82. ehd1a ENSDARG00000098853 1092 1.479 - - - - - 0.704 0.775 - - EH-domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2518]
83. zgc:152830 ENSDARG00000079932 12194 1.477 - - - - - 0.700 0.777 - - zgc:152830 [Source:ZFIN;Acc:ZDB-GENE-090312-55]
84. med22 ENSDARG00000014148 1307 1.474 - 0.702 - 0.772 - - - - - mediator complex subunit 22 [Source:ZFIN;Acc:ZDB-GENE-040625-156]
85. rftn2 ENSDARG00000056078 1449 1.472 - - - 0.705 - 0.767 - - - raftlin family member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2760]
86. serping1 ENSDARG00000058053 1344 1.472 0.725 - - - - 0.747 - - - serpin peptidase inhibitor, clade G (C1 inhibitor), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1262]
87. zgc:77651 zgc:77651 615 1.466 - - - - - 0.737 0.729 - -
88. dap1b ENSDARG00000086842, ENSDARG00000109678 2464 1.463 - - - - - 0.725 0.738 - - death associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-000511-4]
89. cyfip1 ENSDARG00000044345 5483 1.458 - - - - - 0.708 0.750 - - cytoplasmic FMR1 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8557]
90. aldh6a1 ENSDARG00000053485 7744 1.458 - 0.704 - - - 0.754 - - - aldehyde dehydrogenase 6 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-030131-9192]
91. hsdl2 ENSDARG00000002523 2746 1.457 - 0.709 - - - - 0.748 - - hydroxysteroid dehydrogenase like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1066]
92. ntd5 ENSDARG00000040944 4988 1.456 - - - 0.707 - - - 0.749 - ntl-dependent gene 5 [Source:ZFIN;Acc:ZDB-GENE-031030-7]
93. si:ch211-198a12.6 ENSDARG00000074624, ENSDARG00000114808 8911 1.456 0.749 - - - - - 0.707 - - si:ch211-198a12.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1683]
94. znrf2a ENSDARG00000077855 1845 1.455 - - - - - 0.708 0.747 - - zinc and ring finger 2a [Source:ZFIN;Acc:ZDB-GENE-070820-15]
95. C1H7orf55 C1H7orf55 2552 1.455 - - - 0.708 - 0.747 - - -
96. rnps1 ENSDARG00000116743 9994 1.453 - - - - - - 0.716 0.737 - RNA binding protein S1, serine-rich domain [Source:NCBI gene;Acc:327020]
97. KRT18 ENSDARG00000018404, ENSDARG00000109528 6022 1.446 - - - - - 0.729 0.717 - - keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
98. lsm14aa ENSDARG00000006600 2298 1.445 - - - 0.707 - - 0.738 - - LSM14A mRNA processing body assembly factor a [Source:ZFIN;Acc:ZDB-GENE-040426-1567]
99. f5 ENSDARG00000055705 973 1.445 - - - - - 0.704 0.741 - - coagulation factor V [Source:ZFIN;Acc:ZDB-GENE-030131-5531]
100. hipk3a ENSDARG00000062469 2607 1.443 - - - 0.739 - - 0.704 - - homeodomain interacting protein kinase 3a [Source:ZFIN;Acc:ZDB-GENE-061207-54]

There are 1345 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA