Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for letm1

Gene Name Gene ID Reads Annotation
letm1 ENSDARG00000056978, ENSDARG00000110254 1079 leucine zipper-EF-hand containing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-154]










Genes with expression patterns similar to letm1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. letm1 ENSDARG00000056978, ENSDARG00000110254 1079 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 leucine zipper-EF-hand containing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-154]
2. morc3a ENSDARG00000056679 648 1.562 - - - 0.712 - - 0.850 - - MORC family CW-type zinc finger 3a [Source:ZFIN;Acc:ZDB-GENE-030131-1502]
3. tcf20 ENSDARG00000078348 1051 1.548 - - - 0.733 - - 0.815 - - transcription factor 20 [Source:ZFIN;Acc:ZDB-GENE-110411-97]
4. pm20d1.2 ENSDARG00000062096 97 1.546 - - - - - 0.808 0.738 - - peptidase M20 domain containing 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-061013-637]
5. si:ch211-202f5.3 ENSDARG00000092998 1388 1.511 0.741 - - - - - 0.770 - - si:ch211-202f5.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1042]
6. zgc:86896 ENSDARG00000090369 839 1.497 - 0.716 - - - - 0.781 - - zgc:86896 [Source:ZFIN;Acc:ZDB-GENE-040625-80]
7. blvra ENSDARG00000059857 270 1.49 - - - 0.762 - - 0.728 - - biliverdin reductase A [Source:ZFIN;Acc:ZDB-GENE-060929-312]
8. lrrc1 ENSDARG00000102684 1054 1.484 - 0.712 - - - - 0.772 - - leucine rich repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-050320-1]
9. lonrf1l ENSDARG00000078567 1049 1.471 - - - - - 0.765 0.706 - - LON peptidase N-terminal domain and ring finger 1, like [Source:ZFIN;Acc:ZDB-GENE-081104-397]
10. leprel1 leprel1 437 1.454 0.737 - - - - - 0.717 - -
11. sema4ba ENSDARG00000074414 1194 1.45 - - - - - - 0.711 0.739 - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ba [Source:ZFIN;Acc:ZDB-GENE-070705-31]
12. kdm5c ENSDARG00000006124 4389 1.419 - 0.710 - - - - 0.709 - - lysine (K)-specific demethylase 5C [Source:ZFIN;Acc:ZDB-GENE-060810-94]
13. rnpc3 ENSDARG00000011247 778 1.411 - 0.703 - - - 0.708 - - - RNA-binding region (RNP1, RRM) containing 3 [Source:ZFIN;Acc:ZDB-GENE-060312-35]
14. ihha ENSDARG00000058733 241 0.9 - - - - - - 0.900 - - Indian hedgehog homolog a [Source:ZFIN;Acc:ZDB-GENE-051010-1]
15. flot2b ENSDARG00000069774 2831 0.884 - - - - - - 0.884 - - flotillin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1368]
16. capg capg 2569 0.879 - - - - - - 0.879 - -
17. slmapa ENSDARG00000054458 966 0.879 - - - - - - 0.879 - - sarcolemma associated protein a [Source:ZFIN;Acc:ZDB-GENE-061013-184]
18. zgc:194392 ENSDARG00000074809 329 0.877 - - - - - - 0.877 - - zgc:194392 [Source:ZFIN;Acc:ZDB-GENE-030131-4774]
19. cdk11b ENSDARG00000102546 1579 0.877 - - - - - - 0.877 - - cyclin-dependent kinase 11B [Source:ZFIN;Acc:ZDB-GENE-041212-74]
20. spast ENSDARG00000024933 557 0.874 - - - - - - 0.874 - - spastin [Source:ZFIN;Acc:ZDB-GENE-040426-2331]
21. lrrc58a ENSDARG00000076773 1269 0.872 - - - - - - 0.872 - - leucine rich repeat containing 58a [Source:ZFIN;Acc:ZDB-GENE-090312-76]
22. gmcl1 ENSDARG00000020948 261 0.872 - - - - - 0.872 - - - germ cell-less, spermatogenesis associated 1 [Source:ZFIN;Acc:ZDB-GENE-030131-865]
23. dpf1 ENSDARG00000099927, ENSDARG00000115986 138 0.868 - - - - - 0.868 - - - D4, zinc and double PHD fingers family 1 [Source:ZFIN;Acc:ZDB-GENE-050913-31]
24. ppil1 ENSDARG00000015422 1353 0.867 - - - - - - 0.867 - - peptidylprolyl isomerase (cyclophilin)-like 1 [Source:ZFIN;Acc:ZDB-GENE-051009-1]
25. glyctk ENSDARG00000060120 143 0.867 - - - - - - 0.867 - - glycerate kinase [Source:ZFIN;Acc:ZDB-GENE-061013-308]
26. pkig ENSDARG00000086471 665 0.862 - - - - - 0.862 - - - protein kinase (cAMP-dependent, catalytic) inhibitor gamma [Source:ZFIN;Acc:ZDB-GENE-050302-97]
27. sidt2 ENSDARG00000045976 1997 0.86 - - - - - - 0.860 - - SID1 transmembrane family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7356]
28. rasa4 ENSDARG00000029372 295 0.858 - - - - - - 0.858 - - RAS p21 protein activator 4 [Source:ZFIN;Acc:ZDB-GENE-060526-349]
29. PVRL4_1 PVRL4_1 702 0.858 - - - - - - 0.858 - -
30. cyp2v1 ENSDARG00000018485 694 0.855 - - - - - - 0.855 - - cytochrome P450, family 2, subfamily V, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040912-139]
31. pacs2 ENSDARG00000078185 333 0.855 - - - - - 0.855 - - - phosphofurin acidic cluster sorting protein 2 [Source:ZFIN;Acc:ZDB-GENE-081218-1]
32. tm2d1 ENSDARG00000057042 759 0.855 - - - - - - 0.855 - - TM2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050208-580]
33. btbd10a ENSDARG00000062674 1144 0.854 - 0.854 - - - - - - - BTB (POZ) domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-070410-41]
34. BCL6B ENSDARG00000069335 602 0.852 - - - - - 0.852 - - - B-cell CLL/lymphoma 6, member B [Source:ZFIN;Acc:ZDB-GENE-120907-1]
35. tasp1 ENSDARG00000060580 453 0.851 - - - - - 0.851 - - - taspase, threonine aspartase, 1 [Source:ZFIN;Acc:ZDB-GENE-070424-242]
36. SEC16B ENSDARG00000099554 411 0.85 - - - - - 0.850 - - - SEC16 homolog B, endoplasmic reticulum export factor [Source:ZFIN;Acc:ZDB-GENE-050208-274]
37. mtrr ENSDARG00000045398 325 0.849 - - - - - 0.849 - - - 5-methyltetrahydrofolate-homocysteine methyltransferase reductase [Source:ZFIN;Acc:ZDB-GENE-101115-3]
38. sec24c ENSDARG00000103516 1575 0.849 - - - - - - 0.849 - - SEC24 homolog C, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-030131-4487]
39. cav2 ENSDARG00000052000 2516 0.848 - - - - - - 0.848 - - caveolin 2 [Source:ZFIN;Acc:ZDB-GENE-040625-164]
40. mfsd5 ENSDARG00000015997 570 0.845 - - - - - - 0.845 - - major facilitator superfamily domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040718-468]
41. NUAK1 NUAK1 1074 0.844 - - - - - - 0.844 - -
42. WNK2_1 WNK2_1 1048 0.844 - - - - - - 0.844 - -
43. prnprs3 ENSDARG00000003705 1854 0.841 - 0.841 - - - - - - - prion protein, related sequence 3 [Source:ZFIN;Acc:ZDB-GENE-041221-3]
44. yes1 ENSDARG00000005941 3577 0.84 - - - - - - 0.840 - - YES proto-oncogene 1, Src family tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-050126-1]
45. PARP10 PARP10 385 0.839 - - - - - - 0.839 - -
46. atl2 ENSDARG00000057719, ENSDARG00000113378, ENSDARG00000113487 1582 0.838 - 0.838 - - - - - - - atlastin GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6505]
47. slc38a5a ENSDARG00000009901 2527 0.837 - - - - - - 0.837 - - solute carrier family 38, member 5a [Source:ZFIN;Acc:ZDB-GENE-081105-92]
48. DOCK2 66 0.837 - - - - - 0.837 - - - dedicator of cytokinesis 2
49. taf6 ENSDARG00000102998 722 0.835 - - - - - - 0.835 - - TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-040912-23]
50. BX957362.1 ENSDARG00000105682 1941 0.834 - - - - - - 0.834 - - uncharacterized LOC103911422 [Source:NCBI gene;Acc:103911422]
51. CR788231.1 CR788231.1 61 0.833 - - - - - 0.833 - - -
52. CDH26 CDH26 938 0.833 - - - - - - 0.833 - -
53. ttc36 ENSDARG00000011693 61 0.832 - - - - - 0.832 - - - tetratricopeptide repeat domain 36 [Source:ZFIN;Acc:ZDB-GENE-041114-87]
54. itpkb ENSDARG00000010059 2352 0.832 - - - - - - 0.832 - - inositol-trisphosphate 3-kinase B [Source:ZFIN;Acc:ZDB-GENE-041014-166]
55. CR936975.4 CR936975.4 235 0.831 - - - - - - 0.831 - -
56. cyp3c1 ENSDARG00000015575 825 0.831 - - - - - - 0.831 - - cytochrome P450, family 3, subfamily c, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3060]
57. hsd17b12a ENSDARG00000015709 2499 0.83 - - - - - - 0.830 - - hydroxysteroid (17-beta) dehydrogenase 12a [Source:ZFIN;Acc:ZDB-GENE-030131-5628]
58. KLB ENSDARG00000076294 595 0.829 - - - - - - 0.829 - - klotho beta [Source:ZFIN;Acc:ZDB-GENE-110909-4]
59. rrp15 ENSDARG00000013478 1126 0.829 - 0.829 - - - - - - - ribosomal RNA processing 15 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-5261]
60. C13H4orf32 C13H4orf32 174 0.829 - - - - - - 0.829 - -
61. slc33a1 ENSDARG00000020085 899 0.828 - - - - - - 0.828 - - solute carrier family 33 (acetyl-CoA transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1241]
62. cyp2r1 ENSDARG00000056587 84 0.827 - - - - - 0.827 - - - cytochrome P450, family 2, subfamily R, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-110114-1]
63. ptpn13 ENSDARG00000103699 2866 0.827 - - - - - - 0.827 - - protein tyrosine phosphatase, non-receptor type 13 [Source:ZFIN;Acc:ZDB-GENE-070410-72]
64. CLEC19A ENSDARG00000113127, ENSDARG00000115545 486 0.826 - - - - - - 0.826 - - C-type lectin domain containing 19A [Source:ZFIN;Acc:ZDB-GENE-080917-46]
65. CDS1 ENSDARG00000019549 1659 0.826 - - - - - - 0.826 - - CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1 [Source:ZFIN;Acc:ZDB-GENE-070705-78]
66. ARF5 ENSDARG00000070472, ENSDARG00000115687 6101 0.826 - - - - - - 0.826 - - ADP-ribosylation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030910-5]
67. fam46a fam46a 92 0.826 - - - - - 0.826 - - -
68. spata2l ENSDARG00000068814 152 0.825 - - - - - 0.825 - - - spermatogenesis associated 2-like [Source:ZFIN;Acc:ZDB-GENE-070705-402]
69. inpp4aa ENSDARG00000063352 1297 0.825 - - - - - - 0.825 - - inositol polyphosphate-4-phosphatase type I Aa [Source:ZFIN;Acc:ZDB-GENE-060312-5]
70. dpf2 ENSDARG00000012219 666 0.825 - - - - - 0.825 - - - D4, zinc and double PHD fingers family 2 [Source:ZFIN;Acc:ZDB-GENE-041024-2]
71. PPIC ENSDARG00000104343 662 0.824 - - - - - - 0.824 - - peptidylprolyl isomerase C [Source:ZFIN;Acc:ZDB-GENE-170217-1]
72. isl1 ENSDARG00000004023 981 0.824 - - - 0.824 - - - - - ISL LIM homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-112]
73. acin1b ENSDARG00000026842 3806 0.823 - 0.823 - - - - - - - apoptotic chromatin condensation inducer 1b [Source:ZFIN;Acc:ZDB-GENE-030826-12]
74. apeh ENSDARG00000008703 694 0.821 - - - - - - 0.821 - - acylaminoacyl-peptide hydrolase [Source:ZFIN;Acc:ZDB-GENE-030131-9870]
75. pard6a ENSDARG00000069378, ENSDARG00000115700 665 0.821 - - - - - - 0.821 - - par-6 family cell polarity regulator alpha [Source:ZFIN;Acc:ZDB-GENE-070705-215]
76. mapk14a ENSDARG00000000857, ENSDARG00000112397 1743 0.82 - - - - - - 0.820 - - mitogen-activated protein kinase 14a [Source:ZFIN;Acc:ZDB-GENE-010202-2]
77. neurl4 ENSDARG00000078127, ENSDARG00000116566 334 0.82 - - - - - 0.820 - - - neuralized E3 ubiquitin protein ligase 4 [Source:ZFIN;Acc:ZDB-GENE-100318-4]
78. dusp22a ENSDARG00000056396 605 0.82 - - - - - - 0.820 - - dual specificity phosphatase 22a [Source:ZFIN;Acc:ZDB-GENE-040718-219]
79. trappc2 ENSDARG00000097660 760 0.82 - - - - - - 0.820 - - trafficking protein particle complex 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1266]
80. npl ENSDARG00000009390 1377 0.819 - - - - - - 0.819 - - N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase) [Source:ZFIN;Acc:ZDB-GENE-030131-926]
81. tmcc3 ENSDARG00000045525, ENSDARG00000109550 1347 0.819 - - - - - - 0.819 - - transmembrane and coiled-coil domain family 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1811]
82. si:dkeyp-1h4.8 208 0.819 - - - - - - 0.819 - - si:dkeyp-1h4.8
83. SMIM20 ENSDARG00000112670 423 0.819 - 0.819 - - - - - - - small integral membrane protein 20 [Source:ZFIN;Acc:ZDB-GENE-131002-2]
84. PRKD2 ENSDARG00000104676 1004 0.819 - - - - - 0.819 - - - protein kinase D2 [Source:ZFIN;Acc:ZDB-GENE-131120-142]
85. STARD5 ENSDARG00000076117 251 0.818 - - - - - 0.818 - - - StAR-related lipid transfer (START) domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-130103-4]
86. ZDHHC3 ZDHHC3 1208 0.818 - - - - - - 0.818 - -
87. efnb2b_1 ENSDARG00000074050 1094 0.817 - 0.817 - - - - - - - ephrin-B2b [Source:ZFIN;Acc:ZDB-GENE-010618-1]
88. sptssa ENSDARG00000071203 2306 0.817 - - - - - - 0.817 - - serine palmitoyltransferase, small subunit A [Source:ZFIN;Acc:ZDB-GENE-050320-26]
89. mfng ENSDARG00000042925 104 0.817 - - - - - 0.817 - - - MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-041130-1]
90. zgc:194469 ENSDARG00000104367 93 0.817 - - - - - 0.817 - - - zgc:194469 [Source:ZFIN;Acc:ZDB-GENE-081022-114]
91. herpud1 ENSDARG00000024314 1207 0.817 - - - - - - 0.817 - - homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 [Source:ZFIN;Acc:ZDB-GENE-050913-47]
92. CCNYL1 ENSDARG00000099692 1330 0.816 - - - 0.816 - - - - - cyclin Y-like 1 [Source:ZFIN;Acc:ZDB-GENE-060929-732]
93. spred2b ENSDARG00000008372 405 0.816 - 0.816 - - - - - - - sprouty-related, EVH1 domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2342]
94. PPP1R8 PPP1R8 1897 0.816 - 0.816 - - - - - - -
95. rad54l2 ENSDARG00000063031 821 0.816 - 0.816 - - - - - - - RAD54 like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3097]
96. cox14 ENSDARG00000092124 2229 0.815 - 0.815 - - - - - - - cytochrome c oxidase assembly factor COX14 [Source:ZFIN;Acc:ZDB-GENE-060503-626]
97. sap18 ENSDARG00000057854, ENSDARG00000110983 3132 0.813 - - - - - - 0.813 - - Sin3A-associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-1679]
98. pcmtl ENSDARG00000042848, ENSDARG00000110149 301 0.811 - - - - - 0.811 - - - l-isoaspartyl protein carboxyl methyltransferase, like [Source:ZFIN;Acc:ZDB-GENE-040426-1738]
99. senp3b ENSDARG00000056741 1296 0.81 - - - - - - 0.810 - - SUMO specific peptidase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-6714]
100. cryl1 ENSDARG00000003675, ENSDARG00000112171 1496 0.81 - - - - - - 0.810 - - crystallin, lambda 1 [Source:ZFIN;Acc:ZDB-GENE-060810-7]

There are 542 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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