Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lef1

Gene Name Gene ID Reads Annotation
lef1 ENSDARG00000031894 492 lymphoid enhancer-binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-990714-26]










Genes with expression patterns similar to lef1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lef1 ENSDARG00000031894 492 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 lymphoid enhancer-binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-990714-26]
2. TOP1 ENSDARG00000086775 48 2.312 - 0.754 - - - 0.772 0.786 - - DNA topoisomerase I [Source:ZFIN;Acc:ZDB-GENE-030131-5390]
3. her15.2 her15.2 1701 2.181 - 0.709 - - 0.701 - - - 0.771
4. VDR VDR 489 1.824 - - - 0.914 0.910 - - - -
5. si:dkey-20l4.2 si:dkey-20l4.2 110 1.777 - - - - 0.949 - 0.828 - -
6. C17H15orf41 C17H15orf41 313 1.776 - - - 0.883 0.893 - - - -
7. lgi2a ENSDARG00000111069 965 1.757 - 0.825 - - 0.932 - - - - leucine-rich repeat LGI family, member 2a [Source:ZFIN;Acc:ZDB-GENE-060217-2]
8. gad2 ENSDARG00000015537 724 1.751 - 0.829 - - 0.922 - - - - glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
9. zbtb20 ENSDARG00000005586 195 1.747 - 0.797 - - 0.950 - - - - zinc finger and BTB domain containing 20 [Source:ZFIN;Acc:ZDB-GENE-070112-1992]
10. rereb ENSDARG00000075670 136 1.745 - 0.797 - - 0.948 - - - - arginine-glutamic acid dipeptide (RE) repeats b [Source:ZFIN;Acc:ZDB-GENE-070212-3]
11. KCNB2 ENSDARG00000088842 35 1.743 - 0.796 - 0.947 - - - - - potassium voltage-gated channel subfamily B member 2 [Source:HGNC Symbol;Acc:HGNC:6232]
12. si:dkey-16p6.1_1 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 37 1.742 - - - 0.865 - - 0.877 - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
13. MTBP ENSDARG00000090447 174 1.741 - 0.801 - - 0.940 - - - - MDM2 binding protein [Source:ZFIN;Acc:ZDB-GENE-120724-1]
14. etv1 ENSDARG00000101959 358 1.724 - - - - 0.946 - - - 0.778 ets variant 1 [Source:ZFIN;Acc:ZDB-GENE-070104-1]
15. syt9b ENSDARG00000029239 31 1.715 - 0.797 - - - - 0.918 - - synaptotagmin IXb [Source:ZFIN;Acc:ZDB-GENE-040822-6]
16. nrn1a ENSDARG00000071860 1311 1.715 - - - - 0.904 - - - 0.811 neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
17. npdc1 npdc1 221 1.712 - - - 0.932 - - 0.780 - -
18. camk1db ENSDARG00000017446 47 1.712 - 0.797 - 0.915 - - - - - calcium/calmodulin-dependent protein kinase 1Db [Source:ZFIN;Acc:ZDB-GENE-070112-1872]
19. LPL_1 LPL_1 1150 1.703 - - - - 0.926 - - - 0.777
20. celf3a ENSDARG00000034668 2432 1.703 - 0.888 - - 0.815 - - - - cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
21. gng3 ENSDARG00000009553 2530 1.701 - 0.821 - - 0.880 - - - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
22. ENSDARG00000086878 ENSDARG00000086878 332 1.698 - 0.754 - - 0.944 - - - -
23. slc18a3a ENSDARG00000006356 1285 1.683 - 0.808 - - 0.875 - - - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
24. ablim2 ENSDARG00000055223 1934 1.67 - 0.804 - - 0.866 - - - - actin binding LIM protein family, member 2 [Source:ZFIN;Acc:ZDB-GENE-100316-5]
25. tmem230a ENSDARG00000027687, ENSDARG00000109832 333 1.66 - - - - 0.941 - 0.719 - - transmembrane protein 230a [Source:ZFIN;Acc:ZDB-GENE-040822-20]
26. mark2b ENSDARG00000032458 821 1.659 - - - 0.721 0.938 - - - - MAP/microtubule affinity-regulating kinase 2b [Source:ZFIN;Acc:ZDB-GENE-080215-4]
27. si:ch211-167b20.7 si:ch211-167b20.7 3 1.658 - - - - - - 0.828 0.830 -
28. ehmt1b ENSDARG00000026634, ENSDARG00000116921 1261 1.658 - - - - 0.919 - - - 0.739 euchromatic histone-lysine N-methyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-080515-3]
29. dbnla ENSDARG00000008170 2129 1.657 0.807 - - - 0.850 - - - - drebrin-like a [Source:ZFIN;Acc:ZDB-GENE-040704-42]
30. zgc:86725 2559 1.657 - 0.879 - - 0.778 - - - - zgc:86725
31. napepld ENSDARG00000009252 228 1.656 0.833 0.823 - - - - - - - N-acyl phosphatidylethanolamine phospholipase D [Source:ZFIN;Acc:ZDB-GENE-030131-3856]
32. tmigd1 ENSDARG00000007040 19 1.655 - 0.797 - - - - 0.858 - - transmembrane and immunoglobulin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-080303-6]
33. CR388095.2 ENSDARG00000117604 76 1.646 - 0.797 - - - - 0.849 - -
34. usp49 ENSDARG00000000229 706 1.646 - - - - 0.916 - - - 0.730 ubiquitin specific peptidase 49 [Source:ZFIN;Acc:ZDB-GENE-050208-484]
35. cpeb1a ENSDARG00000045932 81 1.646 - 0.780 - 0.866 - - - - - cytoplasmic polyadenylation element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-080723-42]
36. BX000701.2 ENSDARG00000105074 1123 1.63 - - - 0.782 0.848 - - - - gastrula zinc finger protein XlCGF7.1-like [Source:NCBI gene;Acc:101884528]
37. sox12 ENSDARG00000025847 681 1.629 - 0.797 - - - - - - 0.832 SRY (sex determining region Y)-box 12 [Source:ZFIN;Acc:ZDB-GENE-040724-33]
38. CABZ01041769.1 CABZ01041769.1 17 1.625 - 0.797 - - - - 0.828 - -
39. CR391998.1 ENSDARG00000091817 15 1.625 - 0.797 - - - - 0.828 - - putative protein TPRXL [Source:NCBI gene;Acc:101882255]
40. grem2 grem2 743 1.625 - 0.703 - - 0.922 - - - -
41. BX088708.1 BX088708.1 6503 1.615 - 0.818 - - - - - - 0.797
42. wu:fq41a10 wu:fq41a10 7009 1.6 - 0.757 - - 0.843 - - - -
43. lbx1b ENSDARG00000018611 399 1.593 - 0.755 - 0.838 - - - - - ladybird homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050309-27]
44. tfap2b ENSDARG00000012667 746 1.59 - - - - - - - 0.757 0.833 transcription factor AP-2 beta [Source:ZFIN;Acc:ZDB-GENE-050417-394]
45. lingo1b ENSDARG00000035899 86 1.587 - 0.797 - - - - - 0.790 - leucine rich repeat and Ig domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040912-136]
46. tspan5b ENSDARG00000070449 1056 1.583 - - - - 0.878 - - - 0.705 tetraspanin 5b [Source:ZFIN;Acc:ZDB-GENE-041212-12]
47. lingo1a ENSDARG00000034165 179 1.582 - 0.797 - 0.785 - - - - - leucine rich repeat and Ig domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-080327-16]
48. pigo ENSDARG00000011743 928 1.571 - - - 0.798 - 0.773 - - - phosphatidylinositol glycan anchor biosynthesis, class O [Source:ZFIN;Acc:ZDB-GENE-091204-80]
49. zgc:66350 zgc:66350 122 1.569 - - - - - 0.752 0.817 - -
50. CABZ01068473.1 CABZ01068473.1 67 1.566 - - - - - 0.763 0.803 - -
51. sox10 ENSDARG00000077467 1936 1.563 - 0.794 - - 0.769 - - - - SRY (sex determining region Y)-box 10 [Source:ZFIN;Acc:ZDB-GENE-011207-1]
52. wu:fj29h11 ENSDARG00000096562 863 1.55 - - - - 0.846 - - - 0.704 wu:fj29h11 [Source:ZFIN;Acc:ZDB-GENE-030131-7558]
53. fam122b ENSDARG00000036500, ENSDARG00000116582 1408 1.541 0.831 - - - - - - - 0.710 family with sequence similarity 122B [Source:ZFIN;Acc:ZDB-GENE-040801-204]
54. sat2b ENSDARG00000104221 674 1.54 0.780 0.760 - - - - - - - spermidine/spermine N1-acetyltransferase family member 2b [Source:ZFIN;Acc:ZDB-GENE-040718-292]
55. HNRNPH3 ENSDARG00000039466, ENSDARG00000113164, ENSDARG00000114248 551 1.536 - - - 0.822 - 0.714 - - - heterogeneous nuclear ribonucleoprotein H3 (2H9) [Source:ZFIN;Acc:ZDB-GENE-060421-3878]
56. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 1.536 - 0.797 - - - - - - 0.739 immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
57. st8sia2 ENSDARG00000018788 2183 1.531 - - - - 0.816 - - - 0.715 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
58. tgm5l ENSDARG00000098837 174 1.513 - - - 0.711 - 0.802 - - - transglutaminase 5, like [Source:ZFIN;Acc:ZDB-GENE-110411-176]
59. nfixa ENSDARG00000043226 14 1.512 - 0.797 - - - - - 0.715 - nuclear factor I/Xa [Source:ZFIN;Acc:ZDB-GENE-080722-15]
60. SMAD4_3 SMAD4_3 131 1.51 - 0.709 - 0.801 - - - - -
61. nkiras2_1 ENSDARG00000052594 31 1.508 - 0.797 - - - - - 0.711 - NFKB inhibitor interacting Ras-like 2 [Source:ZFIN;Acc:ZDB-GENE-040801-166]
62. si:dkeyp-51b9.3 ENSDARG00000092379 1374 1.506 0.780 0.726 - - - - - - - si:dkeyp-51b9.3 [Source:ZFIN;Acc:ZDB-GENE-081104-469]
63. nova2 ENSDARG00000017673 7685 1.496 - 0.762 - - - - - - 0.734 neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
64. si:dkey-245p14.4 ENSDARG00000070320 418 1.48 - 0.744 - - - - 0.736 - - si:dkey-245p14.4 [Source:ZFIN;Acc:ZDB-GENE-061207-63]
65. PLXDC2 ENSDARG00000059950 220 1.47 - 0.730 - 0.740 - - - - - plexin domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-140106-69]
66. SMARCAD1 SMARCAD1 104 1.465 - - 0.729 0.736 - - - - -
67. scdb ENSDARG00000030265 271 1.455 - 0.710 - 0.745 - - - - - stearoyl-CoA desaturase b [Source:ZFIN;Acc:ZDB-GENE-050522-12]
68. ly75 ENSDARG00000053113 196 1.449 - 0.713 - 0.736 - - - - - lymphocyte antigen 75 [Source:ZFIN;Acc:ZDB-GENE-050309-166]
69. TNPO2 ENSDARG00000042887 2290 1.449 - - - - 0.744 - - - 0.705 transportin 2 [Source:HGNC Symbol;Acc:HGNC:19998]
70. CR678040.1 CR678040.1 117 1.443 - 0.726 - - - - - - 0.717
71. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 1.438 - - - - 0.731 - - - 0.707 myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
72. LARS2 ENSDARG00000075337 181 1.434 - 0.717 - 0.717 - - - - - leucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070928-3]
73. ghrhra ENSDARG00000104961 230 1.408 - - 0.707 - - - 0.701 - - growth hormone releasing hormone receptor a [Source:ZFIN;Acc:ZDB-GENE-050315-2]
74. si:ch211-117m20.5 ENSDARG00000091996 7246 0.989 0.989 - - - - - - - - si:ch211-117m20.5 [Source:ZFIN;Acc:ZDB-GENE-030131-12]
75. BX927351.1 ENSDARG00000096844 125 0.976 0.976 - - - - - - - -
76. BX571949.1 BX571949.1 293 0.958 - - - - 0.958 - - - -
77. amotl2a ENSDARG00000061923 4713 0.957 - - - - 0.957 - - - - angiomotin like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-9770]
78. alg10 ENSDARG00000053917 491 0.956 - - - - 0.956 - - - - asparagine-linked glycosylation 10 [Source:ZFIN;Acc:ZDB-GENE-110310-8]
79. dlg2 ENSDARG00000099323 162 0.954 - - - - 0.954 - - - - discs, large homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050221-3]
80. mis18a ENSDARG00000035333 555 0.952 - - - - 0.952 - - - - MIS18 kinetochore protein A [Source:ZFIN;Acc:ZDB-GENE-091204-314]
81. stub1 ENSDARG00000045228 105 0.95 - - - - 0.950 - - - - STIP1 homology and U-Box containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2963]
82. si:dkeyp-106c3.1 ENSDARG00000090623 225 0.95 - - - - 0.950 - - - - si:dkeyp-106c3.1 [Source:ZFIN;Acc:ZDB-GENE-050411-73]
83. GRIN2B GRIN2B 140 0.949 - - - - 0.949 - - - -
84. pex12 ENSDARG00000035149 175 0.949 - - - - 0.949 - - - - peroxisomal biogenesis factor 12 [Source:ZFIN;Acc:ZDB-GENE-040426-929]
85. si:dkey-37o8.1 ENSDARG00000071727 64 0.949 - - - - 0.949 - - - - si:dkey-37o8.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5667]
86. cep72 ENSDARG00000105258 344 0.949 - - - - 0.949 - - - - centrosomal protein 72 [Source:ZFIN;Acc:ZDB-GENE-101115-1]
87. KEL ENSDARG00000076950 159 0.948 - - - - 0.948 - - - - Kell metallo-endopeptidase (Kell blood group) [Source:ZFIN;Acc:ZDB-GENE-110411-118]
88. ubxn8 ENSDARG00000098902, ENSDARG00000113836 152 0.948 - - - 0.948 - - - - - UBX domain protein 8 [Source:ZFIN;Acc:ZDB-GENE-050522-266]
89. slc2a8 ENSDARG00000104278 764 0.948 - - - - 0.948 - - - - solute carrier family 2 (facilitated glucose transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-030829-25]
90. LRRC30 LRRC30 83 0.947 - - - - 0.947 - - - -
91. pigt ENSDARG00000075842 210 0.947 - - - - 0.947 - - - - phosphatidylinositol glycan anchor biosynthesis, class T [Source:ZFIN;Acc:ZDB-GENE-090313-46]
92. anxa13l ENSDARG00000013613 631 0.947 - - - - 0.947 - - - - annexin A13, like [Source:ZFIN;Acc:ZDB-GENE-050522-310]
93. TTF1_3 TTF1_3 215 0.946 - - - - 0.946 - - - -
94. si:ch211-288g17.3 ENSDARG00000070959 2425 0.945 - - - - 0.945 - - - - si:ch211-288g17.3 [Source:ZFIN;Acc:ZDB-GENE-030131-461]
95. dhdds ENSDARG00000039851 1135 0.945 - - - - 0.945 - - - - dehydrodolichyl diphosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-2236]
96. sugp1 ENSDARG00000075936 826 0.944 - - - - 0.944 - - - - SURP and G patch domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070615-33]
97. si:ch73-353p21.5 si:ch73-353p21.5 568 0.944 - - - - 0.944 - - - -
98. si:dkey-183n20.2 si:dkey-183n20.2 210 0.944 - - - - 0.944 - - - -
99. si:ch211-181p13.2 ENSDARG00000096484 94 0.944 - - - - 0.944 - - - - si:ch211-181p13.2 [Source:ZFIN;Acc:ZDB-GENE-030131-9054]
100. lrp12 ENSDARG00000098845 999 0.944 - - - - 0.944 - - - - low density lipoprotein receptor-related protein 12 [Source:ZFIN;Acc:ZDB-GENE-060503-399]

There are 1730 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA