Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ldlrad3

Gene Name Gene ID Reads Annotation
ldlrad3 ENSDARG00000078600 926 low density lipoprotein receptor class A domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1533]










Genes with expression patterns similar to ldlrad3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ldlrad3 ENSDARG00000078600 926 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 low density lipoprotein receptor class A domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1533]
2. ARHGAP35 2409 1.766 - - - - - 0.998 - 0.768 - Rho GTPase activating protein 35b, transcript variant X2
3. atf4b2 atf4b2 4734 1.715 - - - - - 0.989 0.726 - -
4. thoc1 ENSDARG00000088246 1718 1.712 0.713 - - - - 0.999 - - - THO complex 1 [Source:ZFIN;Acc:ZDB-GENE-030826-9]
5. ppm1la ENSDARG00000063218 2142 1.708 - - - - - 0.997 - 0.711 - protein phosphatase, Mg2+/Mn2+ dependent, 1La [Source:ZFIN;Acc:ZDB-GENE-061103-118]
6. gnsa ENSDARG00000023766 545 1.63 0.824 - - - - - 0.806 - - glucosamine (N-acetyl)-6-sulfatase a [Source:ZFIN;Acc:ZDB-GENE-050107-5]
7. cdan1 ENSDARG00000042261 658 1.569 0.855 - - - - - - 0.714 - codanin 1 [Source:ZFIN;Acc:ZDB-GENE-110411-280]
8. gcc1 ENSDARG00000045541 1821 1.547 0.723 - - - - - - 0.824 - GRIP and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-118]
9. ifrd2 ENSDARG00000036811, ENSDARG00000115385 3697 1.538 - 0.802 - - - - 0.736 - - interferon-related developmental regulator 2 [Source:ZFIN;Acc:ZDB-GENE-040801-140]
10. FRMD4B FRMD4B 359 1.537 0.709 0.828 - - - - - - -
11. cplx4c ENSDARG00000094889 253 1.53 - 0.817 - - - - - 0.713 - complexin 4c [Source:ZFIN;Acc:ZDB-GENE-101018-1]
12. stat4 ENSDARG00000028731 146 1.516 - 0.727 - - 0.789 - - - - signal transducer and activator of transcription 4 [Source:ZFIN;Acc:ZDB-GENE-030616-264]
13. rtkn2 rtkn2 1092 1.513 0.745 - - - - - 0.768 - -
14. CPNE8_1 CPNE8_1 140 1.513 0.787 - - - 0.726 - - - -
15. ccdc93 ENSDARG00000040678 1131 1.508 - - - - - - 0.721 0.787 - coiled-coil domain containing 93 [Source:ZFIN;Acc:ZDB-GENE-060421-8315]
16. ZNF337_7 ZNF337_7 198 1.492 - - - - 0.786 - - 0.706 -
17. ss18l2 ENSDARG00000101085 748 1.481 - 0.766 - - - - - 0.715 - synovial sarcoma translocation gene on chromosome 18-like 2 [Source:ZFIN;Acc:ZDB-GENE-050417-268]
18. cramp1l cramp1l 700 1.463 0.733 0.730 - - - - - - -
19. scrn2 ENSDARG00000043497 204 1.46 - 0.738 - - - - - 0.722 - secernin 2 [Source:ZFIN;Acc:ZDB-GENE-040724-75]
20. txndc11 ENSDARG00000101291 589 1.428 - 0.725 - - - - - 0.703 - thioredoxin domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-041008-112]
21. rnf41 ENSDARG00000036831, ENSDARG00000111636 872 1.427 0.708 - - - - - - 0.719 - ring finger protein 41 [Source:ZFIN;Acc:ZDB-GENE-040426-2920]
22. slc35b1_1 ENSDARG00000038213 194 1.419 0.705 - - - - - - 0.714 - solute carrier family 35, member B1 [Source:ZFIN;Acc:ZDB-GENE-040912-148]
23. olfml2bb ENSDARG00000021480 256 1 - - - - - 1.000 - - - olfactomedin-like 2Bb [Source:ZFIN;Acc:ZDB-GENE-070912-266]
24. ctdspla ENSDARG00000071673 1447 0.999 - - - - - 0.999 - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a [Source:ZFIN;Acc:ZDB-GENE-060825-333]
25. gopc ENSDARG00000023117 1206 0.999 - - - - - 0.999 - - - golgi-associated PDZ and coiled-coil motif containing [Source:ZFIN;Acc:ZDB-GENE-030131-5086]
26. myo5b ENSDARG00000062003 653 0.999 - - - - - 0.999 - - - myosin VB [Source:ZFIN;Acc:ZDB-GENE-031219-7]
27. cited2 ENSDARG00000030905 1319 0.999 - - - - - 0.999 - - - Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 [Source:ZFIN;Acc:ZDB-GENE-041010-141]
28. tpd52l2a ENSDARG00000027154 4359 0.999 - - - - - 0.999 - - - tumor protein D52-like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7047]
29. icln icln 1279 0.999 - - - - - 0.999 - - -
30. cul1a ENSDARG00000019239, ENSDARG00000113068, ENSDARG00000114068 2110 0.999 - - - - - 0.999 - - - cullin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2603]
31. sap18 ENSDARG00000057854, ENSDARG00000110983 3132 0.999 - - - - - 0.999 - - - Sin3A-associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-1679]
32. mef2cb ENSDARG00000009418 1124 0.999 - - - - - 0.999 - - - myocyte enhancer factor 2cb [Source:ZFIN;Acc:ZDB-GENE-040901-7]
33. etf1 etf1 12861 0.999 - - - - - 0.999 - - -
34. hoxb1a ENSDARG00000008174 462 0.999 - - - - - 0.999 - - - homeobox B1a [Source:ZFIN;Acc:ZDB-GENE-990415-101]
35. UNCX ENSDARG00000102976 847 0.999 - - - - - 0.999 - - - UNC homeobox [Source:ZFIN;Acc:ZDB-GENE-080509-1]
36. s1pr2 ENSDARG00000036548 1109 0.999 - - - - - 0.999 - - - sphingosine-1-phosphate receptor 2 [Source:ZFIN;Acc:ZDB-GENE-020123-2]
37. MTMR11 ENSDARG00000069755 917 0.999 - - - - - 0.999 - - - myotubularin related protein 11 [Source:ZFIN;Acc:ZDB-GENE-130530-726]
38. pir ENSDARG00000056638 722 0.999 - - - - - 0.999 - - - pirin [Source:ZFIN;Acc:ZDB-GENE-040718-288]
39. nudcd2 ENSDARG00000078059, ENSDARG00000109490 2234 0.999 - - - - - 0.999 - - - NudC domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040801-49]
40. ube2g2 ENSDARG00000025404 1774 0.999 - - - - - 0.999 - - - ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-288]
41. arl8ba ENSDARG00000006915 720 0.999 - - - - - 0.999 - - - ADP-ribosylation factor-like 8Ba [Source:ZFIN;Acc:ZDB-GENE-030131-9370]
42. si:dkeyp-27e10.3 ENSDARG00000063008 369 0.999 - - - - - 0.999 - - - si:dkeyp-27e10.3 [Source:ZFIN;Acc:ZDB-GENE-041210-96]
43. flcn ENSDARG00000062385, ENSDARG00000116055 614 0.999 - - - - - 0.999 - - - folliculin [Source:ZFIN;Acc:ZDB-GENE-060421-3470]
44. LRP10 ENSDARG00000054539 1895 0.999 - - - - - 0.999 - - - low density lipoprotein receptor-related protein 10 [Source:ZFIN;Acc:ZDB-GENE-140418-2]
45. zcchc7 ENSDARG00000055443 2159 0.999 - - - - - 0.999 - - - zinc finger, CCHC domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-030102-2]
46. sart3 ENSDARG00000008032 2594 0.999 - - - - - 0.999 - - - squamous cell carcinoma antigen recognized by T cells 3 [Source:ZFIN;Acc:ZDB-GENE-040724-10]
47. prpf6 ENSDARG00000091367 1868 0.999 - - - - - 0.999 - - - PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2575]
48. FRG1 ENSDARG00000056504 1196 0.999 - - - - - 0.999 - - - FSHD region gene 1 [Source:ZFIN;Acc:ZDB-GENE-050417-324]
49. timm10b ENSDARG00000043898 1233 0.998 - - - - - 0.998 - - - translocase of inner mitochondrial membrane 10 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-370]
50. kifc3 ENSDARG00000054978 1220 0.998 - - - - - 0.998 - - - kinesin family member C3 [Source:ZFIN;Acc:ZDB-GENE-030131-3724]
51. slc3a2a ENSDARG00000036427, ENSDARG00000112231 2967 0.998 - - - - - 0.998 - - - solute carrier family 3 (amino acid transporter heavy chain), member 2a [Source:ZFIN;Acc:ZDB-GENE-000831-3]
52. SPIN4_1 SPIN4_1 2562 0.998 - - - - - 0.998 - - -
53. zgc:162945 ENSDARG00000028815, ENSDARG00000116996 439 0.998 - - - - - 0.998 - - - zgc:162945 [Source:ZFIN;Acc:ZDB-GENE-030131-3975]
54. alpi.1 ENSDARG00000015273 1712 0.998 - - - - - 0.998 - - - alkaline phosphatase, intestinal, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050327-78]
55. thbs4b ENSDARG00000020072 2500 0.998 - - - - - 0.998 - - - thrombospondin 4b [Source:ZFIN;Acc:ZDB-GENE-020708-4]
56. nuf2 ENSDARG00000034624 2252 0.998 - - - - - 0.998 - - - NUF2, NDC80 kinetochore complex component, homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1121]
57. ufm1 ENSDARG00000043857 4152 0.998 - - - - - 0.998 - - - ubiquitin-fold modifier 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2930]
58. CABZ01028296.1 CABZ01028296.1 6203 0.998 - - - - - 0.998 - - -
59. kif13ba ENSDARG00000079731 1726 0.998 - - - - - 0.998 - - - kinesin family member 13Ba [Source:ZFIN;Acc:ZDB-GENE-070521-1]
60. ndrg2 ENSDARG00000011170 11442 0.998 - - - - - 0.998 - - - NDRG family member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-15]
61. mrps24 ENSDARG00000100116 1750 0.998 - - - - - 0.998 - - - mitochondrial ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-050522-393]
62. hm13 ENSDARG00000037846 5019 0.998 - - - - - 0.998 - - - histocompatibility (minor) 13 [Source:ZFIN;Acc:ZDB-GENE-020802-3]
63. vps13a ENSDARG00000039225 3151 0.998 - - - - - 0.998 - - - vacuolar protein sorting 13 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030926-1]
64. mgat1b ENSDARG00000036065 996 0.998 - - - - - 0.998 - - - mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase b [Source:ZFIN;Acc:ZDB-GENE-061103-589]
65. fam50a ENSDARG00000024895 3020 0.998 - - - - - 0.998 - - - family with sequence similarity 50, member A [Source:ZFIN;Acc:ZDB-GENE-050417-110]
66. hspb7 ENSDARG00000104441 1417 0.998 - - - - - 0.998 - - - heat shock protein family, member 7 (cardiovascular) [Source:ZFIN;Acc:ZDB-GENE-041010-136]
67. sufu ENSDARG00000056801 1543 0.998 - - - - - 0.998 - - - suppressor of fused homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6223]
68. GRK6 ENSDARG00000032157 1136 0.998 - - - - - 0.998 - - - G protein-coupled receptor kinase 6 [Source:ZFIN;Acc:ZDB-GENE-101006-5]
69. fam3c ENSDARG00000056152 3833 0.998 - - - - - 0.998 - - - family with sequence similarity 3, member C [Source:ZFIN;Acc:ZDB-GENE-030131-6137]
70. CTBP1 ENSDARG00000057007, ENSDARG00000115804 2088 0.998 - - - - - 0.998 - - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
71. nudt3a ENSDARG00000016256 2713 0.998 - - - - - 0.998 - - - nudix (nucleoside diphosphate linked moiety X)-type motif 3a [Source:ZFIN;Acc:ZDB-GENE-040426-792]
72. mir205 2147 0.998 - - - - - 0.998 - - - microRNA 205
73. kank2 ENSDARG00000018393 1804 0.998 - - - - - 0.998 - - - KN motif and ankyrin repeat domains 2 [Source:ZFIN;Acc:ZDB-GENE-040724-121]
74. emc8 ENSDARG00000017093 1947 0.997 - - - - - 0.997 - - - ER membrane protein complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2692]
75. ST7 ENSDARG00000039960, ENSDARG00000112691 2020 0.997 - - - - - 0.997 - - - suppression of tumorigenicity 7 [Source:ZFIN;Acc:ZDB-GENE-060421-2807]
76. mcm2 ENSDARG00000102798 8148 0.997 - - - - - 0.997 - - - minichromosome maintenance complex component 2 [Source:ZFIN;Acc:ZDB-GENE-020419-24]
77. zgc:66479 ENSDARG00000008732 3347 0.997 - - - - - 0.997 - - - zgc:66479 [Source:ZFIN;Acc:ZDB-GENE-031030-10]
78. pi4kaa ENSDARG00000076724 1949 0.997 - - - - - 0.997 - - - phosphatidylinositol 4-kinase, catalytic, alpha a [Source:ZFIN;Acc:ZDB-GENE-100204-2]
79. C19H1orf51 C19H1orf51 1776 0.997 - - - - - 0.997 - - -
80. ptgs1 ENSDARG00000052148 2443 0.997 - - - - - 0.997 - - - prostaglandin-endoperoxide synthase 1 [Source:ZFIN;Acc:ZDB-GENE-020530-1]
81. mcm7 ENSDARG00000101180 12417 0.997 - - - - - 0.997 - - - minichromosome maintenance complex component 7 [Source:ZFIN;Acc:ZDB-GENE-020419-27]
82. pitx2 ENSDARG00000036194 2279 0.997 - - - - - 0.997 - - - paired-like homeodomain 2 [Source:ZFIN;Acc:ZDB-GENE-990714-27]
83. pfkpa ENSDARG00000028000 1206 0.997 - - - - - 0.997 - - - phosphofructokinase, platelet a [Source:ZFIN;Acc:ZDB-GENE-091112-22]
84. si:dkey-42i9.4 ENSDARG00000008049 4752 0.996 - - - - - 0.996 - - - si:dkey-42i9.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8398]
85. psma3 ENSDARG00000086618 6200 0.996 - - - - - 0.996 - - - proteasome subunit alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050913-120]
86. prkacaa ENSDARG00000100349 2711 0.996 - - - - - 0.996 - - - protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a [Source:ZFIN;Acc:ZDB-GENE-050114-6]
87. phyhd1 ENSDARG00000029905 1394 0.996 - - - - - 0.996 - - - phytanoyl-CoA dioxygenase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-159]
88. neurod4 ENSDARG00000003469, ENSDARG00000117149 1732 0.996 - - - - - 0.996 - - - neuronal differentiation 4 [Source:ZFIN;Acc:ZDB-GENE-030730-1]
89. chst11 ENSDARG00000034375 2701 0.996 - - - - - 0.996 - - - carbohydrate (chondroitin 4) sulfotransferase 11 [Source:ZFIN;Acc:ZDB-GENE-040315-1]
90. fam131bb ENSDARG00000070575 1054 0.996 - - - - - 0.996 - - - family with sequence similarity 131, member Bb [Source:ZFIN;Acc:ZDB-GENE-100922-12]
91. nhsl1b ENSDARG00000042627 3697 0.996 - - - - - 0.996 - - - NHS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040910-1]
92. slc1a5 ENSDARG00000099186 7580 0.996 - - - - - 0.996 - - - solute carrier family 1 (neutral amino acid transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-070501-4]
93. MIB1 ENSDARG00000102184 3285 0.996 - - - - - 0.996 - - - mindbomb E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-030404-2]
94. ppargc1b ENSDARG00000101569 3452 0.996 - - - - - 0.996 - - - peroxisome proliferator-activated receptor gamma, coactivator 1 beta [Source:ZFIN;Acc:ZDB-GENE-030616-43]
95. pacsin3 ENSDARG00000099339 4668 0.995 - - - - - 0.995 - - - protein kinase C and casein kinase substrate in neurons 3 [Source:ZFIN;Acc:ZDB-GENE-040426-984]
96. cpsf6 ENSDARG00000018618 3923 0.995 - - - - - 0.995 - - - cleavage and polyadenylation specific factor 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5277]
97. eprs ENSDARG00000060494 4729 0.995 - - - - - 0.995 - - - glutamyl-prolyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-638]
98. tars ENSDARG00000013250, ENSDARG00000110996, ENSDARG00000113759 4599 0.994 - - - - - 0.994 - - - threonyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-041010-218]
99. myo1c myo1c 4978 0.994 - - - - - 0.994 - - -
100. si:ch211-286b5.5 ENSDARG00000096661 3136 0.994 - - - - - 0.994 - - - si:ch211-286b5.5 [Source:ZFIN;Acc:ZDB-GENE-121214-209]

There are 801 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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