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Results for ldlr

Gene Name Gene ID Reads Annotation
ldlr ldlr 35










Genes with expression patterns similar to ldlr

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ldlr ldlr 35 4 - - - - 1.000 - 1.000 1.000 1.000
2. cpb1 ENSDARG00000045442, ENSDARG00000110762 22 1.817 - - - - 0.836 - - - 0.981 carboxypeptidase B1 (tissue) [Source:ZFIN;Acc:ZDB-GENE-030131-1132]
3. si:ch211-283g2.1 ENSDARG00000046091 123 1.767 - - - - 0.893 - - - 0.874 si:ch211-283g2.1 [Source:ZFIN;Acc:ZDB-GENE-060531-57]
4. rnasen ENSDARG00000055563 609 1.657 - - - - - - 0.766 - 0.891 ribonuclease type III, nuclear [Source:ZFIN;Acc:ZDB-GENE-070209-23]
5. arhgap4a ENSDARG00000039265 181 1.649 - - - - - - 0.768 - 0.881 Rho GTPase activating protein 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1229]
6. skilb ENSDARG00000022904 300 1.538 - - - - - - 0.764 - 0.774 SKI-like proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-080723-40]
7. rgs5a ENSDARG00000002644, ENSDARG00000114979 564 1.514 - - - - - - 0.793 - 0.721 regulator of G protein signaling 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7570]
8. si:dkey-4m13.3 6 1 - - - - 1.000 - - - - si:dkey-4m13.3
9. ARFGAP1 ENSDARG00000101616 2952 1 - - - - 1.000 - - - - ADP-ribosylation factor GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-041114-130]
10. rgs16 ENSDARG00000040177, ENSDARG00000110238 12 1 - - - - 1.000 - - - - regulator of G protein signaling 16 [Source:ZFIN;Acc:ZDB-GENE-050417-393]
11. hmgcra ENSDARG00000052734, ENSDARG00000109336 45 0.99 - - - - - - - - 0.990 3-hydroxy-3-methylglutaryl-CoA reductase a [Source:ZFIN;Acc:ZDB-GENE-040401-2]
12. CRHR2 ENSDARG00000092918, ENSDARG00000103704 12 0.989 - - - - - - - - 0.989 corticotropin releasing hormone receptor 2 [Source:NCBI gene;Acc:100002312]
13. ribc1 ENSDARG00000055739 32 0.989 - - - - - - - - 0.989 RIB43A domain with coiled-coils 1 [Source:ZFIN;Acc:ZDB-GENE-081031-7]
14. C5H9orf171 C5H9orf171 34 0.989 - - - - - - - - 0.989
15. si:ch211-202h22.10 ENSDARG00000087290 13 0.989 - - - - - - - - 0.989 si:ch211-202h22.10 [Source:ZFIN;Acc:ZDB-GENE-110914-121]
16. zgc:165481 ENSDARG00000060092 95 0.988 - - - - - - - - 0.988 zgc:165481 [Source:ZFIN;Acc:ZDB-GENE-070615-21]
17. si:ch211-76l23.5 si:ch211-76l23.5 26 0.988 - - - - - - - - 0.988
18. si:dkey-238o14.6 si:dkey-238o14.6 42 0.987 - - - - - - - - 0.987
19. dnajb13 ENSDARG00000043157 50 0.987 - - - - - - - - 0.987 DnaJ (Hsp40) homolog, subfamily B, member 13 [Source:ZFIN;Acc:ZDB-GENE-040910-4]
20. htr1fa ENSDARG00000002773, ENSDARG00000109862 38 0.986 - - - - - - - - 0.986 5-hydroxytryptamine (serotonin) receptor 1Fa [Source:ZFIN;Acc:ZDB-GENE-081105-125]
21. arl10 37 0.986 - - - - - - - - 0.986 ADP-ribosylation factor-like 10
22. gpr126 gpr126 51 0.986 - - - - - - - - 0.986
23. ccdc106 ccdc106 101 0.984 - - - - - - - - 0.984
24. KIF21B ENSDARG00000009733 53 0.983 - - - - - - - - 0.983 kinesin family member 21B [Source:ZFIN;Acc:ZDB-GENE-130530-537]
25. stx11a ENSDARG00000044039 39 0.983 - - - - - - - - 0.983 syntaxin 11a [Source:ZFIN;Acc:ZDB-GENE-040426-2564]
26. URB1 ENSDARG00000060308 78 0.982 - - - - - - - - 0.982 URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]
27. BX649554.3_1 BX649554.3_1 1071 0.981 - - - - - - - - 0.981
28. arl15a ENSDARG00000076040, ENSDARG00000114295 41 0.979 - - - - - - - - 0.979 ADP-ribosylation factor-like 15a [Source:ZFIN;Acc:ZDB-GENE-070209-3]
29. thbs4a ENSDARG00000102777 625 0.974 - - - - - - - - 0.974 thrombospondin 4a [Source:ZFIN;Acc:ZDB-GENE-080215-11]
30. klhl23 ENSDARG00000078475 92 0.974 - - - - - - - - 0.974 kelch-like family member 23 [Source:ZFIN;Acc:ZDB-GENE-081104-458]
31. C5H9orf117 C5H9orf117 88 0.973 - - - - - - - - 0.973
32. ccdc169 ENSDARG00000089570 101 0.973 - - - - - - - - 0.973 coiled-coil domain containing 169 [Source:ZFIN;Acc:ZDB-GENE-091204-29]
33. zgc:162184 ENSDARG00000077217 47 0.97 - - - - - - - - 0.970 zgc:162184 [Source:ZFIN;Acc:ZDB-GENE-070424-83]
34. si:dkey-88j15.5 si:dkey-88j15.5 48 0.969 - - - - - - - - 0.969
35. BX890577.1 BX890577.1 257 0.967 - - - - - - - - 0.967
36. RUFY1 ENSDARG00000078685 114 0.966 - - - - - - - - 0.966 RUN and FYVE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090421-4]
37. lss ENSDARG00000061274 68 0.966 - - - - - - - - 0.966 lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) [Source:ZFIN;Acc:ZDB-GENE-050119-7]
38. ccrl1a ccrl1a 40 0.963 - - - - - - - - 0.963
39. CU929225.1 CU929225.1 104 0.961 - - - - - - - - 0.961
40. sult2st3 ENSDARG00000028367 79 0.961 - - - - - - - - 0.961 sulfotransferase family 2, cytosolic sulfotransferase 3 [Source:ZFIN;Acc:ZDB-GENE-061117-4]
41. SRR SRR 544 0.961 - - - - - - - - 0.961
42. ctgfb ENSDARG00000104292 69 0.959 - - - - - - - - 0.959 connective tissue growth factor b [Source:ZFIN;Acc:ZDB-GENE-070705-82]
43. atp2c1 ENSDARG00000060197 273 0.958 - - - - - - - - 0.958 ATPase secretory pathway Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-060503-615]
44. RAP1GAP2 RAP1GAP2 52 0.958 - - - - - - 0.958 - -
45. fpgt ENSDARG00000042139 155 0.958 - - - - - - - - 0.958 fucose-1-phosphate guanylyltransferase [Source:ZFIN;Acc:ZDB-GENE-050522-489]
46. si:ch73-257c13.2 ENSDARG00000074305 197 0.956 - - - - - - - - 0.956 si:ch73-257c13.2 [Source:ZFIN;Acc:ZDB-GENE-081104-269]
47. SORCS2 ENSDARG00000077465 185 0.956 - - - - - - - - 0.956 sortilin-related VPS10 domain containing receptor 2 [Source:ZFIN;Acc:ZDB-GENE-130530-825]
48. eva1bb ENSDARG00000100698 223 0.955 - - - - - - - - 0.955 eva-1 homolog Bb (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-080204-108]
49. si:ch211-89f7.1 si:ch211-89f7.1 699 0.954 - - - - - - - - 0.954
50. QPCT ENSDARG00000089717 1383 0.954 - - - - - - - - 0.954 glutaminyl-peptide cyclotransferase [Source:ZFIN;Acc:ZDB-GENE-130827-1]
51. gnat2 ENSDARG00000042529 112 0.952 - - - - - - 0.952 - - guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-011128-10]
52. CR759791.3 CR759791.3 134 0.951 - - - - - - - - 0.951
53. CU234171.2 CU234171.2 86 0.95 - - - - - - 0.950 - -
54. si:dkey-43b14.8 35 0.947 - - - - - - - - 0.947 si:dkey-43b14.8
55. CABZ01038313.1 CABZ01038313.1 79 0.946 - - - - - - - - 0.946
56. rmi1 ENSDARG00000041376 674 0.945 - - - - - - - - 0.945 RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-829]
57. POMK ENSDARG00000003208, ENSDARG00000112152 529 0.944 - - - - - - - - 0.944 protein-O-mannose kinase [Source:ZFIN;Acc:ZDB-GENE-041114-119]
58. SLC36A4 ENSDARG00000039661 175 0.943 - - - - - - - - 0.943 solute carrier family 36 (proton/amino acid symporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-050309-239]
59. si:dkey-204f11.64 ENSDARG00000094695 586 0.942 - - - - - - - - 0.942 si:dkey-204f11.64 [Source:ZFIN;Acc:ZDB-GENE-030131-8332]
60. tnfaip8l2a ENSDARG00000075592 90 0.942 - - - - - - - - 0.942 tumor necrosis factor, alpha-induced protein 8-like 2a [Source:ZFIN;Acc:ZDB-GENE-060616-38]
61. CSGALNACT1 CSGALNACT1 116 0.94 - - - - - - - - 0.940
62. ntpcr ENSDARG00000021853 104 0.939 - - - - - - - - 0.939 nucleoside-triphosphatase, cancer-related [Source:ZFIN;Acc:ZDB-GENE-040801-200]
63. mgat1b ENSDARG00000036065 996 0.939 - - - - - - - - 0.939 mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase b [Source:ZFIN;Acc:ZDB-GENE-061103-589]
64. osbp2 ENSDARG00000053487 42 0.937 - - - - - - - - 0.937 oxysterol binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-091113-18]
65. pex16 ENSDARG00000058202 486 0.935 - - - - - - - - 0.935 peroxisomal biogenesis factor 16 [Source:ZFIN;Acc:ZDB-GENE-050626-49]
66. si:rp71-1i20.2 ENSDARG00000043198 113 0.934 - - - - - - - - 0.934 si:rp71-1i20.2 [Source:ZFIN;Acc:ZDB-GENE-040724-207]
67. gcga ENSDARG00000079296 70 0.934 - - - - - - 0.934 - - glucagon a [Source:ZFIN;Acc:ZDB-GENE-010219-1]
68. HEATR2_1 HEATR2_1 166 0.934 - - - - - - - - 0.934
69. epb41l4b ENSDARG00000061398 721 0.934 - - - - - - - - 0.934 erythrocyte membrane protein band 4.1 like 4B [Source:ZFIN;Acc:ZDB-GENE-100921-92]
70. adm2a ENSDARG00000045708, ENSDARG00000111740 246 0.933 - - - - - - - - 0.933 adrenomedullin 2a [Source:ZFIN;Acc:ZDB-GENE-041210-100]
71. mst4 mst4 1672 0.931 - - - - - - - - 0.931
72. FP015791.1 FP015791.1 90 0.93 - - - - - - 0.930 - -
73. GPR4 ENSDARG00000079479 92 0.93 - - - - - - 0.930 - - G protein-coupled receptor 4 [Source:ZFIN;Acc:ZDB-GENE-101202-1]
74. si:busm1-228j01.5 si:busm1-228j01.5 9 0.93 - - - - - - 0.930 - -
75. has2 ENSDARG00000036987 349 0.93 - - - - - - - - 0.930 hyaluronan synthase 2 [Source:ZFIN;Acc:ZDB-GENE-020828-1]
76. plxdc1 ENSDARG00000078417 41 0.93 - - - - - - 0.930 - - plexin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081104-391]
77. CU928217.1 CU928217.1 12 0.93 - - - - - - 0.930 - -
78. CABZ01064968.2 CABZ01064968.2 20 0.93 - - - - - - 0.930 - -
79. col5a3a_1 ENSDARG00000098294 271 0.93 - - - - - - - - 0.930 collagen, type V, alpha 3a [Source:ZFIN;Acc:ZDB-GENE-030131-968]
80. MASP1 ENSDARG00000068726 34 0.93 - - - - - - 0.930 - - mannan-binding lectin serine peptidase 1 [Source:ZFIN;Acc:ZDB-GENE-110421-4]
81. BX510926.2 BX510926.2 12 0.93 - - - - - - 0.930 - -
82. tmem107l ENSDARG00000088398, ENSDARG00000109909 208 0.926 - - - - - - - - 0.926 transmembrane protein 107 like [Source:ZFIN;Acc:ZDB-GENE-090313-269]
83. nsfa ENSDARG00000007654 16 0.925 - - - - 0.925 - - - - N-ethylmaleimide-sensitive factor a [Source:ZFIN;Acc:ZDB-GENE-030616-37]
84. MRPL53_1 MRPL53_1 83 0.925 - - - - - - - - 0.925
85. dfna5 dfna5 361 0.925 - - - - - - 0.925 - -
86. pipox ENSDARG00000055591 260 0.924 - - - - - - - - 0.924 pipecolic acid oxidase [Source:ZFIN;Acc:ZDB-GENE-110627-2]
87. ndufaf7 ENSDARG00000033134 202 0.924 - - - - - - - - 0.924 NADH:ubiquinone oxidoreductase complex assembly factor 7 [Source:ZFIN;Acc:ZDB-GENE-060929-628]
88. ADAMTSL3 ENSDARG00000027903 278 0.924 - - - - - - - - 0.924 ADAMTS-like 3 [Source:ZFIN;Acc:ZDB-GENE-121030-8]
89. acsl3a ENSDARG00000032079 897 0.923 - - - - - - - - 0.923 acyl-CoA synthetase long chain family member 3a [Source:ZFIN;Acc:ZDB-GENE-050420-181]
90. smyd4 ENSDARG00000060983 106 0.922 - - - - - - 0.922 - - SET and MYND domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-248]
91. agtr1b ENSDARG00000045443 232 0.922 - - - - - - - - 0.922 angiotensin II receptor, type 1b [Source:ZFIN;Acc:ZDB-GENE-110411-117]
92. hsd17b7 ENSDARG00000088140 185 0.922 - - - - - - - - 0.922 hydroxysteroid (17-beta) dehydrogenase 7 [Source:ZFIN;Acc:ZDB-GENE-061013-378]
93. ablim3 ENSDARG00000088168, ENSDARG00000112071, ENSDARG00000114074 573 0.92 - - - - - - - - 0.920 actin binding LIM protein family, member 3 [Source:ZFIN;Acc:ZDB-GENE-070112-1122]
94. sptlc3 ENSDARG00000030743 596 0.92 - - - - - - - - 0.920 serine palmitoyltransferase, long chain base subunit 3 [Source:ZFIN;Acc:ZDB-GENE-041210-281]
95. ZNF385D ENSDARG00000086162 202 0.918 - - - - - - - - 0.918 zinc finger protein 385D [Source:ZFIN;Acc:ZDB-GENE-130201-2]
96. spata6l ENSDARG00000004874 149 0.917 - - - - - - - - 0.917 spermatogenesis associated 6-like [Source:ZFIN;Acc:ZDB-GENE-040426-1369]
97. hsp70l_1 ENSDARG00000055723 72 0.917 - - - - - - - - 0.917 heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1]
98. kremen1 ENSDARG00000062579 190 0.917 - - - - - - - - 0.917 kringle containing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-070705-262]
99. CABZ01077217.1_1 ENSDARG00000079145 184 0.916 - - - - - - - - 0.916 uncharacterized LOC100007503 [Source:NCBI gene;Acc:100007503]
100. acad9 ENSDARG00000055620 211 0.916 - - - - - - - - 0.916 acyl-CoA dehydrogenase family, member 9 [Source:ZFIN;Acc:ZDB-GENE-060616-196]

There are 648 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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