Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ldhbb

Gene Name Gene ID Reads Annotation
ldhbb ENSDARG00000071076 31 lactate dehydrogenase Bb [Source:ZFIN;Acc:ZDB-GENE-040718-176]










Genes with expression patterns similar to ldhbb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ldhbb ENSDARG00000071076 31 8 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 lactate dehydrogenase Bb [Source:ZFIN;Acc:ZDB-GENE-040718-176]
2. pde6a ENSDARG00000000380 40 2.618 - - 0.809 - 0.836 - - 0.973 - phosphodiesterase 6A, cGMP-specific, rod, alpha [Source:ZFIN;Acc:ZDB-GENE-030616-42]
3. DYNLRB2 DYNLRB2 12 2 1.000 - - - - 1.000 - - -
4. sagb ENSDARG00000038378 28 1.989 - - - - - 1.000 - 0.989 - S-antigen; retina and pineal gland (arrestin) b [Source:ZFIN;Acc:ZDB-GENE-050913-98]
5. saga ENSDARG00000012610 63 1.979 1.000 - - - - - - 0.979 - S-antigen; retina and pineal gland (arrestin) a [Source:ZFIN;Acc:ZDB-GENE-040426-1538]
6. pnrc1 ENSDARG00000043904 74 1.961 1.000 - - - - - - 0.961 - proline-rich nuclear receptor coactivator 1 [Source:ZFIN;Acc:ZDB-GENE-040724-189]
7. fem1a ENSDARG00000067966 11 1.913 - - 0.913 - - 1.000 - - - fem-1 homolog a (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-5824]
8. rem2 ENSDARG00000074064, ENSDARG00000109687 219 1.881 1.000 - - - - - - 0.881 - RAS (RAD and GEM)-like GTP binding 2 [Source:ZFIN;Acc:ZDB-GENE-081110-1]
9. TTF1_2 TTF1_2 26 1.831 - - - - 0.831 1.000 - - -
10. CU633991.1 CU633991.1 16 1.826 1.000 - 0.826 - - - - - -
11. snai3 ENSDARG00000031243 31 1.803 - 0.803 - - - 1.000 - - - snail family zinc finger 3 [Source:ZFIN;Acc:ZDB-GENE-061013-757]
12. ENSDARG00000096199 ENSDARG00000096199 15 1.803 - 0.803 - - - 1.000 - - -
13. svopb ENSDARG00000014951 1 1.803 - 0.803 - - - 1.000 - - - SV2 related protein b [Source:ZFIN;Acc:ZDB-GENE-070705-359]
14. esr2a ENSDARG00000016454 23 1.803 - - - - - 1.000 0.803 - - estrogen receptor 2a [Source:ZFIN;Acc:ZDB-GENE-030116-2]
15. CABZ01086354.1 CABZ01086354.1 22 1.803 - 0.803 - - - 1.000 - - -
16. si:ch211-259i2.2 si:ch211-259i2.2 45 1.803 1.000 0.803 - - - - - - -
17. echdc1 68 1.796 0.796 - - - - 1.000 - - - enoyl CoA hydratase domain containing 1, transcript variant 1
18. CCDC37 CCDC37 10 1.796 0.796 - - - - 1.000 - - -
19. sytl3 ENSDARG00000043468 1 1.781 - - - - 0.978 - 0.803 - - synaptotagmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-040724-150]
20. abcg1 ENSDARG00000063475 97 1.776 0.796 - - - - - - 0.980 - ATP-binding cassette, sub-family G (WHITE), member 1 [Source:ZFIN;Acc:ZDB-GENE-070424-84]
21. arl14 ENSDARG00000063223 211 1.761 - 0.963 - - - - 0.798 - - ADP-ribosylation factor-like 14 [Source:ZFIN;Acc:ZDB-GENE-070705-288]
22. pdcd2 ENSDARG00000007892 223 1.756 - - - - - - 0.792 0.964 - programmed cell death 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1236]
23. CABZ01054405.1 CABZ01054405.1 115 1.74 - - - - 0.762 - - 0.978 -
24. hlcs ENSDARG00000039934 2 1.74 - - - - - 1.000 - - 0.740 holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase) [Source:ZFIN;Acc:ZDB-GENE-030131-5333]
25. si:dkey-66i24.10 si:dkey-66i24.10 6 1.734 - - - - - 1.000 0.734 - -
26. pabpn1l ENSDARG00000087996, ENSDARG00000113382 40 1.721 - 0.721 - - - 1.000 - - - poly(A) binding protein, nuclear 1-like (cytoplasmic) [Source:ZFIN;Acc:ZDB-GENE-080709-5]
27. si:dkeyp-46h3.8 ENSDARG00000093704 9 1.708 0.796 - - - 0.912 - - - - si:dkeyp-46h3.8 [Source:ZFIN;Acc:ZDB-GENE-060503-183]
28. LRRC4C ENSDARG00000113411 36 1.706 - - - - 0.721 - - 0.985 - leucine rich repeat containing 4C [Source:ZFIN;Acc:ZDB-GENE-050522-533]
29. ighv14-1 ENSDARG00000096418 17 1.705 - 0.812 - - - - 0.893 - - immunoglobulin heavy variable 14-1 [Source:ZFIN;Acc:ZDB-GENE-040514-42]
30. atp2b1b ENSDARG00000007788 56 1.699 - - - - - 0.739 - 0.960 - ATPase plasma membrane Ca2+ transporting 1b [Source:ZFIN;Acc:ZDB-GENE-080409-1]
31. ZNF365 ENSDARG00000087985 28 1.684 - - - - - 0.881 0.803 - - zinc finger protein 365 [Source:ZFIN;Acc:ZDB-GENE-131121-260]
32. golga2 ENSDARG00000063197 30 1.684 0.811 - - - - 0.873 - - - golgin A2 [Source:ZFIN;Acc:ZDB-GENE-081030-1]
33. Metazoa_SRP_25 Metazoa_SRP_25 13 1.676 - 0.803 - - - 0.873 - - -
34. OVGP1 ENSDARG00000075745 6 1.659 - - 0.856 - - - 0.803 - - oviductal glycoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-118]
35. slc5a11 ENSDARG00000019932 160 1.655 - 0.760 - - - - - 0.895 - solute carrier family 5 (sodium/inositol cotransporter), member 11 [Source:ZFIN;Acc:ZDB-GENE-041114-9]
36. NUDT7 ENSDARG00000070387 32 1.653 - 0.939 - - - - 0.714 - - nudix (nucleoside diphosphate linked moiety X)-type motif 7 [Source:ZFIN;Acc:ZDB-GENE-131127-212]
37. si:dkey-246g23.2 ENSDARG00000062964 5 1.652 - - 0.912 - - - - - 0.740 si:dkey-246g23.2 [Source:ZFIN;Acc:ZDB-GENE-050419-100]
38. skor1a ENSDARG00000069030 19 1.639 - 0.803 - - 0.836 - - - - SKI family transcriptional corepressor 1a [Source:ZFIN;Acc:ZDB-GENE-080722-5]
39. si:dkey-238m4.1 si:dkey-238m4.1 71 1.638 - 0.899 - - - 0.739 - - -
40. ARSI_1 ARSI_1 38 1.621 - 0.732 - - - 0.889 - - -
41. wasb ENSDARG00000026350 139 1.605 - - - - - 0.857 - 0.748 - Wiskott-Aldrich syndrome (eczema-thrombocytopenia) b [Source:ZFIN;Acc:ZDB-GENE-030131-7098]
42. CABZ01034707.1 CABZ01034707.1 122 1.599 0.796 0.803 - - - - - - -
43. zte25 zte25 29 1.599 - 0.726 - - - 0.873 - - -
44. zgc:171310 ENSDARG00000110627 23 1.592 - 0.729 - - 0.863 - - - - zgc:171310 [Source:ZFIN;Acc:ZDB-GENE-070822-11]
45. bbs12 ENSDARG00000016112 38 1.572 - 0.732 - - - - 0.840 - - Bardet-Biedl syndrome 12 [Source:ZFIN;Acc:ZDB-GENE-070626-3]
46. dcaf5 ENSDARG00000060320 163 1.572 - 0.714 - - - 0.858 - - - ddb1 and cul4 associated factor 5 [Source:ZFIN;Acc:ZDB-GENE-060929-808]
47. TRIM14_2 TRIM14_2 15 1.559 - - 0.756 - - - 0.803 - -
48. CR925813.2 CR925813.2 9 1.556 - - 0.704 - 0.852 - - - -
49. lipt1 ENSDARG00000025233 385 1.552 - 0.751 - - - - - 0.801 - lipoyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060929-112]
50. si:dkey-4c23.3 ENSDARG00000092028, ENSDARG00000110418 4 1.547 - 0.803 - - - 0.744 - - - si:dkey-4c23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-668]
51. GPR26 ENSDARG00000074389, ENSDARG00000116243 21 1.531 - - 0.728 - - - 0.803 - - G protein-coupled receptor 26 [Source:ZFIN;Acc:ZDB-GENE-131121-131]
52. si:ch73-189n23.1 ENSDARG00000086247 15 1.528 0.796 0.732 - - - - - - - si:ch73-189n23.1 [Source:ZFIN;Acc:ZDB-GENE-070705-217]
53. ciz1b ENSDARG00000089461 57 1.528 0.796 0.732 - - - - - - - cdkn1a interacting zinc finger protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2933]
54. dnm2a ENSDARG00000069937 32 1.528 0.796 - - - - 0.732 - - - dynamin 2a [Source:ZFIN;Acc:ZDB-GENE-050913-84]
55. mettl17 ENSDARG00000103889, ENSDARG00000109400 239 1.515 - - - - - 0.778 0.737 - - methyltransferase like 17 [Source:ZFIN;Acc:ZDB-GENE-031118-203]
56. brf2 ENSDARG00000002060 81 1.508 0.705 0.803 - - - - - - - BRF2, RNA polymerase III transcription initiation factor [Source:ZFIN;Acc:ZDB-GENE-040801-43]
57. ABCA7 ABCA7 12 1.502 - - 0.762 - - - - - 0.740
58. si:dkey-151m22.8 ENSDARG00000095934 41 1.478 - 0.738 - - - - - - 0.740 si:dkey-151m22.8 [Source:ZFIN;Acc:ZDB-GENE-110411-250]
59. zmat4b ENSDARG00000061419 7 1.467 - 0.729 0.738 - - - - - - zinc finger, matrin-type 4b [Source:ZFIN;Acc:ZDB-GENE-091118-68]
60. pls1 ENSDARG00000039272 39 1.46 - 0.729 - - - 0.731 - - - plastin 1 (I isoform) [Source:ZFIN;Acc:ZDB-GENE-030131-6205]
61. TKT TKT 298 1.427 - - - - - 0.708 0.719 - -
62. CU929356.4 CU929356.4 86 1 - - - - - 1.000 - - -
63. or115-15 ENSDARG00000079294 1 1 - - - - - 1.000 - - - odorant receptor, family F, subfamily 115, member 15 [Source:ZFIN;Acc:ZDB-GENE-990415-189]
64. PEG3_15 PEG3_15 113 1 1.000 - - - - - - - -
65. cryba2b ENSDARG00000041925 4329 1 - - - - - 1.000 - - - crystallin, beta A2b [Source:ZFIN;Acc:ZDB-GENE-040718-324]
66. CR927050.1 ENSDARG00000099180 5 1 - - - - - 1.000 - - -
67. gbp4 ENSDARG00000068857, ENSDARG00000112635 55 1 - - - - - 1.000 - - - guanylate binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-060531-46]
68. PEG3_35 PEG3_35 52 1 - - - - - 1.000 - - -
69. mfsd6l ENSDARG00000014761 60 1 - - - - - 1.000 - - - major facilitator superfamily domain containing 6-like [Source:ZFIN;Acc:ZDB-GENE-040801-105]
70. si:dkey-58f10.14 ENSDARG00000095026 7 1 - - - - - 1.000 - - - si:dkey-58f10.14 [Source:ZFIN;Acc:ZDB-GENE-060526-316]
71. zgc:173837 ENSDARG00000076949 24 1 - - - - - 1.000 - - - zgc:173837 [Source:ZFIN;Acc:ZDB-GENE-080213-12]
72. asb13a.2 ENSDARG00000045765, ENSDARG00000109879 8 1 - - - - - 1.000 - - - ankyrin repeat and SOCS box containing 13a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041210-88]
73. drc1 ENSDARG00000042182 39 1 - - - - - 1.000 - - - dynein regulatory complex subunit 1 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-041001-218]
74. cers4a ENSDARG00000031387 19 1 - - - - - 1.000 - - - ceramide synthase 4a [Source:ZFIN;Acc:ZDB-GENE-020808-1]
75. p4ha3 ENSDARG00000103692 2 1 - - - - - 1.000 - - - prolyl 4-hydroxylase, alpha polypeptide III [Source:ZFIN;Acc:ZDB-GENE-041010-4]
76. sox8 sox8 109 1 - - - - - 1.000 - - -
77. rac1l_1 ENSDARG00000054649, ENSDARG00000096549 12 1 - - - - - 1.000 - - - Rac family small GTPase 1, like [Source:ZFIN;Acc:ZDB-GENE-060315-6]
78. EVI5L ENSDARG00000052766 8 1 - - - - - 1.000 - - - ecotropic viral integration site 5 like [Source:HGNC Symbol;Acc:HGNC:30464]
79. RAB38 122 1 - - - - - 1.000 - - - RAB38, member RAS oncogene family
80. CU633857.1 ENSDARG00000115315 21 1 - - - - - 1.000 - - - multiciliate differentiation and DNA synthesis associated cell cycle protein [Source:NCBI gene;Acc:100537904]
81. ZC3H8 ZC3H8 114 1 - - - - - 1.000 - - -
82. zgc:173705 ENSDARG00000105137, ENSDARG00000114437 83 1 - - - - - 1.000 - - - zgc:173705 [Source:ZFIN;Acc:ZDB-GENE-080212-6]
83. rtn4rl2b ENSDARG00000037495 11 1 - - - - - 1.000 - - - reticulon 4 receptor-like 2b [Source:ZFIN;Acc:ZDB-GENE-040310-2]
84. brwd3 ENSDARG00000035540 92 1 - - - - - 1.000 - - - bromodomain and WD repeat domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100921-43]
85. stag1a ENSDARG00000061205 13 1 - - - - - 1.000 - - - stromal antigen 1a [Source:ZFIN;Acc:ZDB-GENE-070912-448]
86. si:dkey-115f9.3 7 1 - - - - - 1.000 - - - si:dkey-115f9.3, transcript variant X2
87. sult3st3 ENSDARG00000042920, ENSDARG00000094089 1 1 - - - - - 1.000 - - - sulfotransferase family 3, cytosolic sulfotransferase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-628]
88. mcm5_1 ENSDARG00000019507 10 1 - - - - - 1.000 - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
89. fkbp6 ENSDARG00000030133, ENSDARG00000099077 6 1 - - - - - 1.000 - - - FK506 binding protein 6 [Source:NCBI gene;Acc:402839]
90. mov10b.2 ENSDARG00000056065, ENSDARG00000111814 3 1 - - - - - 1.000 - - - Moloney leukemia virus 10b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060526-371]
91. BX682234.1 ENSDARG00000074732 5 1 - - - - - 1.000 - - - C-type lectin domain family 12 member B-like [Source:NCBI gene;Acc:101882781]
92. sc:d136 sc:d136 2 1 - - - - - 1.000 - - -
93. txlng ENSDARG00000001969 7 1 - - - - - 1.000 - - - taxilin gamma [Source:ZFIN;Acc:ZDB-GENE-060616-122]
94. PGBD1 PGBD1 61 1 1.000 - - - - - - - -
95. F2RL3 ENSDARG00000079399 29 1 - - - - - 1.000 - - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
96. ppid_1 ENSDARG00000038835 4 1 - - - - - 1.000 - - - peptidylprolyl isomerase D [Source:ZFIN;Acc:ZDB-GENE-040625-34]
97. irge4 ENSDARG00000070317 1 1 - - - - - 1.000 - - - immunity-related GTPase family, e4 [Source:ZFIN;Acc:ZDB-GENE-051212-2]
98. zgc:114123 ENSDARG00000044956 9 1 - - - - - 1.000 - - - zgc:114123 [Source:ZFIN;Acc:ZDB-GENE-050913-53]
99. C12H17orf62_1 C12H17orf62_1 83 1 - - - - - 1.000 - - -
100. VASP VASP 22 1 - - - - - 1.000 - - -

There are 1382 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA