Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ldhba

Gene Name Gene ID Reads Annotation
ldhba ENSDARG00000019644 36375 lactate dehydrogenase Ba [Source:ZFIN;Acc:ZDB-GENE-991026-6]










Genes with expression patterns similar to ldhba

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ldhba ENSDARG00000019644 36375 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 lactate dehydrogenase Ba [Source:ZFIN;Acc:ZDB-GENE-991026-6]
2. mat1a ENSDARG00000039605, ENSDARG00000115975 15561 2.332 0.832 - - - - 0.723 - - 0.777 methionine adenosyltransferase I, alpha [Source:ZFIN;Acc:ZDB-GENE-030131-6127]
3. serpina1l ENSDARG00000090850 10625 2.288 0.726 - - - 0.858 - - 0.704 - serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1, like [Source:ZFIN;Acc:ZDB-GENE-040721-3]
4. gamt ENSDARG00000070844, ENSDARG00000109945 49216 1.691 - - 0.753 - - - 0.938 - - guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
5. adka ENSDARG00000039429 7670 1.618 0.903 - - - - - - - 0.715 adenosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030425-3]
6. ctsba ENSDARG00000055120 18732 1.596 0.881 - 0.715 - - - - - - cathepsin Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2650]
7. apoa4 apoa4 84813 1.568 0.816 - 0.752 - - - - - -
8. rbp4 ENSDARG00000101199 59390 1.551 0.802 - 0.749 - - - - - - retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
9. zgc:153129 zgc:153129 97132 1.55 - - 0.782 - 0.768 - - - -
10. nqo1 ENSDARG00000010250 6430 1.466 - - 0.731 - - - - - 0.735 NAD(P)H dehydrogenase, quinone 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1226]
11. sepp1a 41994 1.46 - - - - 0.734 - - 0.726 - selenoprotein P, plasma, 1a
12. gpd1b ENSDARG00000043180 6002 1.448 - - 0.725 - - - - - 0.723 glycerol-3-phosphate dehydrogenase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-3906]
13. zgc:161979_1 zgc:161979_1 206500 1.435 0.723 - - - - - - 0.712 -
14. fgg ENSDARG00000037281, ENSDARG00000114705 10817 1.43 - - 0.726 - - - - - 0.704 fibrinogen gamma chain [Source:ZFIN;Acc:ZDB-GENE-040426-1998]
15. limk2 ENSDARG00000005104 2598 1.426 0.714 - - - 0.712 - - - - LIM domain kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040718-398]
16. apoc2 ENSDARG00000092155 38149 1.421 - - 0.718 - - - - 0.703 - apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
17. zgc:136410 ENSDARG00000102241 8433 1.421 - - - - - - - 0.719 0.702 zgc:136410 [Source:ZFIN;Acc:ZDB-GENE-060421-6071]
18. fga ENSDARG00000020741 5580 1.413 0.702 - 0.711 - - - - - - fibrinogen alpha chain [Source:ZFIN;Acc:ZDB-GENE-031010-21]
19. fgb ENSDARG00000008969 11737 1.405 0.700 - 0.705 - - - - - - fibrinogen beta chain [Source:ZFIN;Acc:ZDB-GENE-030131-9261]
20. murcb murcb 13655 0.877 - - - - 0.877 - - - -
21. evpla ENSDARG00000019808 7565 0.854 0.854 - - - - - - - - envoplakin a [Source:ZFIN;Acc:ZDB-GENE-030829-19]
22. APOA4 APOA4 20822 0.845 0.845 - - - - - - - -
23. dao.1 ENSDARG00000035602 11969 0.829 - - - - 0.829 - - - - D-amino-acid oxidase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050913-127]
24. ctsll ENSDARG00000011701, ENSDARG00000112885 6970 0.827 0.827 - - - - - - - - cathepsin L, like [Source:ZFIN;Acc:ZDB-GENE-041010-76]
25. si:dkey-126g1.9 ENSDARG00000093702 7832 0.826 - 0.826 - - - - - - - si:dkey-126g1.9 [Source:ZFIN;Acc:ZDB-GENE-030131-9862]
26. cox7a3 20842 0.826 - - - - 0.826 - - - - cytochrome c oxidase subunit VIIa polypeptide 3
27. tmem182 tmem182 12589 0.821 - - - - 0.821 - - - -
28. myom1a ENSDARG00000061249 10230 0.82 - - - - 0.820 - - - - myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
29. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 0.813 - - - - 0.813 - - - - si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
30. aldh9a1a.1 ENSDARG00000069100, ENSDARG00000114905 30071 0.812 0.812 - - - - - - - - aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1257]
31. zgc:153867 35088 0.801 0.801 - - - - - - - - zgc:153867, transcript variant X2
32. adssl1 ENSDARG00000099517 7518 0.8 - - - - 0.800 - - - - adenylosuccinate synthase like 1 [Source:ZFIN;Acc:ZDB-GENE-040516-18]
33. hao1 ENSDARG00000024160 6104 0.796 0.796 - - - - - - - - hydroxyacid oxidase (glycolate oxidase) 1 [Source:ZFIN;Acc:ZDB-GENE-060519-2]
34. sec61a1 ENSDARG00000021669 20408 0.792 - - - - 0.792 - - - - Sec61 translocon alpha 1 subunit [Source:ZFIN;Acc:ZDB-GENE-020418-2]
35. tax1bp1b ENSDARG00000056856 4526 0.79 - 0.790 - - - - - - - Tax1 (human T-cell leukemia virus type I) binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2872]
36. CABZ01059390.1 CABZ01059390.1 4340 0.79 - - - - 0.790 - - - -
37. sid4 sid4 1358 0.789 0.789 - - - - - - - -
38. ywhag1 ENSDARG00000067626 3786 0.786 - - - - 0.786 - - - - 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-011115-1]
39. c5 ENSDARG00000021004 3536 0.784 0.784 - - - - - - - - complement component 5 [Source:ZFIN;Acc:ZDB-GENE-120510-2]
40. phb ENSDARG00000057414 9551 0.782 - - - - 0.782 - - - - prohibitin [Source:ZFIN;Acc:ZDB-GENE-030131-6577]
41. MRPL47 ENSDARG00000075743, ENSDARG00000114962 10236 0.781 - 0.781 - - - - - - - mitochondrial ribosomal protein L47 [Source:ZFIN;Acc:ZDB-GENE-030219-177]
42. IDH2 ENSDARG00000003795 18659 0.78 - - - - 0.780 - - - - isocitrate dehydrogenase 2 (NADP+), mitochondrial [Source:ZFIN;Acc:ZDB-GENE-031118-95]
43. zgc:161979 zgc:161979 196746 0.775 0.775 - - - - - - - -
44. npc1 ENSDARG00000017180 3724 0.775 - - - - 0.775 - - - - Niemann-Pick disease, type C1 [Source:ZFIN;Acc:ZDB-GENE-030131-3161]
45. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 0.774 - - - - 0.774 - - - - NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]
46. sdha ENSDARG00000016721 8255 0.772 - - - - 0.772 - - - - succinate dehydrogenase complex, subunit A, flavoprotein (Fp) [Source:ZFIN;Acc:ZDB-GENE-040426-874]
47. apoa1a ENSDARG00000012076, ENSDARG00000110395 163437 0.772 0.772 - - - - - - - - apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
48. sardh ENSDARG00000058102, ENSDARG00000112110 2150 0.772 - - - - 0.772 - - - - sarcosine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-996]
49. stxbp1a ENSDARG00000001994 5154 0.771 - - - - 0.771 - - - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
50. gapdh ENSDARG00000043457 68684 0.77 - - 0.770 - - - - - - glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
51. apoeb ENSDARG00000040295 229165 0.77 0.770 - - - - - - - - apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
52. arpc1a ENSDARG00000008383 7353 0.769 - - - - 0.769 - - - - actin related protein 2/3 complex, subunit 1A [Source:ZFIN;Acc:ZDB-GENE-040116-1]
53. ctsc ENSDARG00000101334 3691 0.767 0.767 - - - - - - - - cathepsin C [Source:ZFIN;Acc:ZDB-GENE-030619-9]
54. mfsd8 ENSDARG00000103235, ENSDARG00000115968 2067 0.765 - - - - - - - 0.765 - major facilitator superfamily domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-060818-29]
55. rgrb ENSDARG00000098724 1546 0.764 0.764 - - - - - - - - retinal G protein coupled receptor b [Source:ZFIN;Acc:ZDB-GENE-050522-447]
56. pgm1 ENSDARG00000013561 11984 0.76 - - - - - - - - 0.760 phosphoglucomutase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1245]
57. APOB APOB 33858 0.76 0.760 - - - - - - - -
58. smyd1b ENSDARG00000091253 4964 0.758 - - - - 0.758 - - - - SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
59. glula ENSDARG00000099776 14156 0.752 - - - - - - - - 0.752 glutamate-ammonia ligase (glutamine synthase) a [Source:ZFIN;Acc:ZDB-GENE-030131-688]
60. taldo1 ENSDARG00000103369 3804 0.751 - - 0.751 - - - - - - transaldolase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3277]
61. fkbp11 ENSDARG00000037000, ENSDARG00000111059 2888 0.745 0.745 - - - - - - - - FK506 binding protein 11 [Source:ZFIN;Acc:ZDB-GENE-030616-357]
62. cst3 ENSDARG00000007795 13753 0.745 - - - - - - - 0.745 - cystatin C (amyloid angiopathy and cerebral hemorrhage) [Source:ZFIN;Acc:ZDB-GENE-030131-373]
63. ass1 8099 0.744 - - - - - - - 0.744 - argininosuccinate synthase 1
64. RBM47 ENSDARG00000061985 2498 0.744 - - - - 0.744 - - - - RNA binding motif protein 47 [Source:ZFIN;Acc:ZDB-GENE-030131-9612]
65. vtnb ENSDARG00000053831 2364 0.744 - - - - - - - 0.744 - vitronectin b [Source:ZFIN;Acc:ZDB-GENE-041116-1]
66. s100v1 ENSDARG00000070427 6633 0.743 - - - - 0.743 - - - - S100 calcium binding protein V1 [Source:ZFIN;Acc:ZDB-GENE-080407-1]
67. col16a1 ENSDARG00000009194 5600 0.743 - - - - 0.743 - - - - collagen, type XVI, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-060503-351]
68. fetub ENSDARG00000053973 43520 0.742 0.742 - - - - - - - - fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
69. etfb ENSDARG00000009250 13036 0.741 - - - - - - - - 0.741 electron transfer flavoprotein subunit beta [Source:ZFIN;Acc:ZDB-GENE-040426-1931]
70. arl6ip1 ENSDARG00000054578, ENSDARG00000112340 11714 0.741 - - - - 0.741 - - - - ADP-ribosylation factor-like 6 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1087]
71. emc1 ENSDARG00000057255 3582 0.739 - - - - 0.739 - - - - ER membrane protein complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-060810-98]
72. arpc2 ENSDARG00000075989 22423 0.738 0.738 - - - - - - - - actin related protein 2/3 complex, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5276]
73. atp6v1ab ENSDARG00000076318, ENSDARG00000112815 3858 0.738 - - 0.738 - - - - - - ATPase H+ transporting V1 subunit Ab [Source:ZFIN;Acc:ZDB-GENE-030131-9529]
74. si:dkey-228b2.5 1760 0.738 - - - - 0.738 - - - - si:dkey-228b2.5
75. stam2 ENSDARG00000005318 2980 0.737 - - - - 0.737 - - - - signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 [Source:ZFIN;Acc:ZDB-GENE-041114-64]
76. postnb ENSDARG00000104267 28076 0.737 0.737 - - - - - - - - periostin, osteoblast specific factor b [Source:ZFIN;Acc:ZDB-GENE-030131-9120]
77. NDUFA3 ENSDARG00000041400 7939 0.734 - - - - 0.734 - - - - NADH:ubiquinone oxidoreductase subunit A3 [Source:ZFIN;Acc:ZDB-GENE-040801-18]
78. denr ENSDARG00000037229 8370 0.734 - - - - 0.734 - - - - density-regulated protein [Source:ZFIN;Acc:ZDB-GENE-040718-450]
79. suclg2 ENSDARG00000044914 7950 0.733 - - - - - - - - 0.733 succinate-CoA ligase, GDP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-030114-3]
80. psap ENSDARG00000013968 22919 0.732 - - 0.732 - - - - - - prosaposin [Source:ZFIN;Acc:ZDB-GENE-020108-1]
81. h3f3d ENSDARG00000045248 43757 0.732 - 0.732 - - - - - - - H3 histone, family 3D [Source:ZFIN;Acc:ZDB-GENE-040426-1023]
82. cd63 ENSDARG00000025147, ENSDARG00000115979 22435 0.732 - - - - - - 0.732 - - CD63 molecule [Source:ZFIN;Acc:ZDB-GENE-030131-180]
83. c3a c3a 6690 0.73 - - - - - - - 0.730 -
84. slc25a20 ENSDARG00000040401 9258 0.73 - 0.730 - - - - - - - solute carrier family 25 (carnitine/acylcarnitine translocase), member 20 [Source:ZFIN;Acc:ZDB-GENE-040426-1869]
85. ppifb ENSDARG00000052842 3533 0.73 - - - - - - - - 0.730 peptidylprolyl isomerase Fb [Source:ZFIN;Acc:ZDB-GENE-051030-126]
86. bhmt ENSDARG00000013430 91357 0.729 0.729 - - - - - - - - betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
87. dgat2 ENSDARG00000018846 5032 0.727 - - 0.727 - - - - - - diacylglycerol O-acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-15]
88. atp6v0ca ENSDARG00000057853 23277 0.727 - - - - 0.727 - - - - ATPase H+ transporting V0 subunit ca [Source:ZFIN;Acc:ZDB-GENE-020419-23]
89. spns1 ENSDARG00000011925, ENSDARG00000111727 3126 0.727 - - - - - - - - 0.727 spinster homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-020228-1]
90. paics ENSDARG00000033539 30682 0.726 - - - - - - - - 0.726 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9762]
91. umps ENSDARG00000012215 4564 0.726 0.726 - - - - - - - - uridine monophosphate synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-785]
92. Sep-02 Sep-02 10074 0.725 - - - - 0.725 - - - -
93. prdx6 ENSDARG00000043511, ENSDARG00000116085 3456 0.725 - - - - - - 0.725 - - peroxiredoxin 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1778]
94. prkar2aa ENSDARG00000033184 14704 0.724 0.724 - - - - - - - - protein kinase, cAMP-dependent, regulatory, type II, alpha A [Source:ZFIN;Acc:ZDB-GENE-030131-1007]
95. itgb1b.1 ENSDARG00000053232 4721 0.724 0.724 - - - - - - - - integrin, beta 1b.1 [Source:ZFIN;Acc:ZDB-GENE-060803-3]
96. atp6v1d ENSDARG00000011175 8331 0.724 - - - - - - - - 0.724 ATPase H+ transporting V1 subunit D [Source:ZFIN;Acc:ZDB-GENE-040426-727]
97. si:dkey-69o16.5 ENSDARG00000070057 3628 0.723 0.723 - - - - - - - - si:dkey-69o16.5 [Source:ZFIN;Acc:ZDB-GENE-081104-432]
98. ifrd2 ENSDARG00000036811, ENSDARG00000115385 3697 0.722 - - - - 0.722 - - - - interferon-related developmental regulator 2 [Source:ZFIN;Acc:ZDB-GENE-040801-140]
99. timm10 ENSDARG00000069116 4459 0.722 - - - - 0.722 - - - - translocase of inner mitochondrial membrane 10 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-427]
100. slc43a2b ENSDARG00000061120, ENSDARG00000117188 33657 0.722 - - - - - - - - 0.722 solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]

There are 67 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA