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Results for ldb1a

Gene Name Gene ID Reads Annotation
ldb1a ENSDARG00000010137 3035 LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]










Genes with expression patterns similar to ldb1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ldb1a ENSDARG00000010137 3035 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
2. CR548630.1 CR548630.1 3301 3.351 - 0.887 0.951 0.795 - - - - 0.718
3. inip ENSDARG00000028523 1925 3.226 - - 0.960 0.733 - 0.789 - - 0.744 ints3 and nabp interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-961]
4. usp1 ENSDARG00000056414 1816 3.13 - 0.896 0.708 0.785 - - 0.741 - - ubiquitin specific peptidase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-726]
5. zbtb18 ENSDARG00000028228 3653 3.07 - 0.750 - 0.760 - - - 0.739 0.821 zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
6. suv39h1b ENSDARG00000055753 1540 3.056 - - - 0.778 - 0.719 - 0.850 0.709 suppressor of variegation 3-9 homolog 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5105]
7. vrk1 ENSDARG00000018006 1759 2.598 - - 0.959 0.845 - - 0.794 - - vaccinia related kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2709]
8. max ENSDARG00000024844 6035 2.564 - - 0.905 0.837 - - - - 0.822 myc associated factor X [Source:ZFIN;Acc:ZDB-GENE-990415-152]
9. znf292a ENSDARG00000016763 2253 2.559 - - 0.965 - - 0.772 - - 0.822 zinc finger protein 292a [Source:ZFIN;Acc:ZDB-GENE-071004-18]
10. marcksa ENSDARG00000004049 2518 2.54 - - - 0.832 - - - 0.823 0.885 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
11. LPHN2 LPHN2 1971 2.54 - - 0.964 0.748 - - - - 0.828
12. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 2.508 - 0.892 - - - - - 0.762 0.854 leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
13. tuba1c ENSDARG00000055216 8384 2.495 - - 0.947 - 0.718 - - - 0.830 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
14. zdhhc6 ENSDARG00000075721 1494 2.435 - 0.973 - 0.755 - - 0.707 - - zinc finger, DHHC-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3189]
15. pbrm1l ENSDARG00000077038, ENSDARG00000116839 1978 2.421 - - 0.970 - - - - 0.745 0.706 polybromo 1, like [Source:ZFIN;Acc:ZDB-GENE-010501-3]
16. cbx3a ENSDARG00000003860 4922 2.414 - - 0.897 - - - 0.737 - 0.780 chromobox homolog 3a (HP1 gamma homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-1158]
17. WAPAL WAPAL 1888 2.392 - 0.841 - 0.796 - - - - 0.755
18. gpm6bb ENSDARG00000001676 2005 2.389 - - - 0.855 - 0.739 - - 0.795 glycoprotein M6Bb [Source:ZFIN;Acc:ZDB-GENE-030710-10]
19. mad2l1 ENSDARG00000004713 3398 2.371 - - 0.921 - - - 0.705 - 0.745 MAD2 mitotic arrest deficient-like 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030515-3]
20. smc2 ENSDARG00000017744, ENSDARG00000114076 2271 2.369 - 0.720 - 0.862 - - - - 0.787 structural maintenance of chromosomes 2 [Source:ZFIN;Acc:ZDB-GENE-030131-105]
21. lsm8 ENSDARG00000091656, ENSDARG00000111914 2751 2.358 - - 0.952 - - 0.703 - - 0.703 LSM8 homolog, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-070629-3]
22. pcnp ENSDARG00000037713 2754 2.343 - 0.764 0.875 - - 0.704 - - - PEST proteolytic signal containing nuclear protein [Source:ZFIN;Acc:ZDB-GENE-041010-130]
23. golga7 ENSDARG00000057676 4691 2.32 - - - 0.841 - 0.756 - - 0.723 golgin A7 [Source:ZFIN;Acc:ZDB-GENE-040625-142]
24. zdhhc17 ENSDARG00000070441 1073 2.314 - 0.830 - 0.742 - 0.742 - - - zinc finger, DHHC-type containing 17 [Source:ZFIN;Acc:ZDB-GENE-070424-194]
25. dnmt3b dnmt3b 2522 2.305 - 0.737 - - - 0.845 - - 0.723
26. AL844567.1 AL844567.1 1605 2.303 - 0.816 - - - - - 0.768 0.719
27. bub1bb ENSDARG00000074927 1667 2.292 - 0.815 - 0.712 - - - - 0.765 BUB1 mitotic checkpoint serine/threonine kinase Bb [Source:ZFIN;Acc:ZDB-GENE-030829-51]
28. epc2 ENSDARG00000007485 1200 2.292 - 0.838 - - - - 0.711 - 0.743 enhancer of polycomb homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-802]
29. ankrd12 ENSDARG00000052419 2579 2.289 - 0.721 - - - - 0.735 - 0.833 ankyrin repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-040426-846]
30. hif1an ENSDARG00000031915 2098 2.282 - - - 0.793 0.706 - - - 0.783 hypoxia inducible factor 1 subunit alpha inhibitor [Source:ZFIN;Acc:ZDB-GENE-030826-19]
31. med19b ENSDARG00000009472 936 2.276 - - - 0.762 - 0.792 0.722 - - mediator complex subunit 19b [Source:ZFIN;Acc:ZDB-GENE-040727-4]
32. parp1 ENSDARG00000019529 6787 2.273 - - - - 0.708 - - 0.727 0.838 poly (ADP-ribose) polymerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3955]
33. ahctf1 ENSDARG00000077530 2315 2.252 - - - - - 0.763 0.732 - 0.757 AT hook containing transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-070521-2]
34. C10H5orf28 C10H5orf28 339 2.251 - - - - - 0.777 0.756 0.718 -
35. smarce1 ENSDARG00000016871 9628 2.24 - - 0.832 - - - 0.708 0.700 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
36. cbx2 ENSDARG00000044938 1576 2.228 - - - 0.705 - 0.762 - - 0.761 chromobox homolog 2 (Drosophila Pc class) [Source:ZFIN;Acc:ZDB-GENE-030131-5502]
37. si:ch73-21g5.7 ENSDARG00000093156 9412 2.228 - - - 0.796 - - - 0.728 0.704 si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
38. fbxl14b ENSDARG00000045801 965 2.186 0.761 - - - - - 0.705 - 0.720 F-box and leucine-rich repeat protein 14b [Source:ZFIN;Acc:ZDB-GENE-030131-3556]
39. vdac1 ENSDARG00000045132 8051 1.823 - 0.943 0.880 - - - - - - voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
40. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 1.801 - - 0.967 0.834 - - - - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
41. setdb1a ENSDARG00000041243 1952 1.786 - 0.817 0.969 - - - - - - SET domain, bifurcated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2421]
42. fam43a ENSDARG00000043009 792 1.78 - 0.967 - - - - 0.813 - - family with sequence similarity 43, member A [Source:ZFIN;Acc:ZDB-GENE-030131-6098]
43. tm2d3 ENSDARG00000076618 2310 1.778 - - 0.940 - - - 0.838 - - TM2 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070620-20]
44. adam10a ENSDARG00000053468 9308 1.773 - 0.873 0.900 - - - - - - ADAM metallopeptidase domain 10a [Source:ZFIN;Acc:ZDB-GENE-040917-2]
45. wdhd1 ENSDARG00000015998 775 1.77 - - 0.970 0.800 - - - - - WD repeat and HMG-box DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1665]
46. arid1aa ENSDARG00000101710 3644 1.767 - 0.922 - - - - - - 0.845 AT rich interactive domain 1Aa (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-080220-35]
47. TMEM185A TMEM185A 5505 1.767 - - 0.952 0.815 - - - - -
48. smad4 smad4 2519 1.76 - - 0.956 - - 0.804 - - -
49. tox ENSDARG00000032317 9126 1.756 - - 0.920 - - - - - 0.836 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
50. lbr ENSDARG00000014013 4835 1.756 - - 0.942 - - - - - 0.814 lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]
51. cxxc1 cxxc1 914 1.756 - 0.939 - 0.817 - - - - -
52. MRPL51 ENSDARG00000041340, ENSDARG00000113440 1544 1.75 - 0.807 0.943 - - - - - - mitochondrial ribosomal protein L51 [Source:ZFIN;Acc:ZDB-GENE-050320-40]
53. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 1.747 - - - - - - - 0.892 0.855 TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
54. atad5a ENSDARG00000070568 1840 1.746 - - 0.976 - - - - - 0.770 ATPase family, AAA domain containing 5a [Source:ZFIN;Acc:ZDB-GENE-070912-20]
55. pld1b ENSDARG00000057125 325 1.744 0.792 - 0.952 - - - - - - phospholipase D1b [Source:ZFIN;Acc:ZDB-GENE-070510-3]
56. rac3b ENSDARG00000020795 1523 1.741 - 0.957 - 0.784 - - - - - Rac family small GTPase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-21]
57. tdrd3 ENSDARG00000025421 633 1.741 - 0.969 - 0.772 - - - - - tudor domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-19]
58. si:dkey-256i11.1 si:dkey-256i11.1 3373 1.739 - - 0.946 0.793 - - - - -
59. tbx2a ENSDARG00000018025, ENSDARG00000109541 1183 1.726 - - 0.958 0.768 - - - - - T-box 2a [Source:ZFIN;Acc:ZDB-GENE-990917-4]
60. ywhae2 ENSDARG00000017014 5105 1.723 - 0.823 0.900 - - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-050306-44]
61. smg5 ENSDARG00000041481 1286 1.719 - - 0.964 - - - - - 0.755 SMG5 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-050913-144]
62. brd1b ENSDARG00000051798 1712 1.717 - 0.866 - - - - - - 0.851 bromodomain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070209-98]
63. plp1a ENSDARG00000103732 3544 1.716 - - 0.922 0.794 - - - - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
64. tdg tdg 3269 1.715 - - 0.947 0.768 - - - - -
65. hdac6 ENSDARG00000008384 144 1.712 - 0.968 - - - - 0.744 - - histone deacetylase 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3232]
66. NAIF1_1 NAIF1_1 1336 1.711 - 0.753 0.958 - - - - - -
67. polb ENSDARG00000003749 2049 1.708 - - 0.978 - - - - - 0.730 polymerase (DNA directed), beta [Source:ZFIN;Acc:ZDB-GENE-040830-1]
68. fam50a ENSDARG00000024895 3020 1.704 - - 0.957 - - - - 0.747 - family with sequence similarity 50, member A [Source:ZFIN;Acc:ZDB-GENE-050417-110]
69. lmbr1 ENSDARG00000024092, ENSDARG00000116241 1418 1.703 - - 0.958 - - 0.745 - - - limb development membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-090128-4]
70. rab9b ENSDARG00000103391 813 1.7 - 0.926 - - - 0.774 - - - RAB9B, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-091118-112]
71. kansl2 ENSDARG00000056318, ENSDARG00000113311 4702 1.7 - - 0.952 - - - - - 0.748 KAT8 regulatory NSL complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-041010-67]
72. ctnnbip1 ENSDARG00000038954 2519 1.698 - - 0.955 - - 0.743 - - - catenin, beta interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-3]
73. arhgef2 ENSDARG00000075819 2173 1.696 - - - - - - - 0.876 0.820 rho/rac guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030717-1]
74. ZNF618 ENSDARG00000071469 2347 1.696 - - 0.968 0.728 - - - - - zinc finger protein 618 [Source:ZFIN;Acc:ZDB-GENE-030131-2063]
75. NAIF1 ENSDARG00000062753 696 1.696 - 0.965 - - - - 0.731 - - nuclear apoptosis inducing factor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-236]
76. rhogc ENSDARG00000028401 2671 1.692 - - 0.963 0.729 - - - - - ras homolog gene family, member Gc [Source:ZFIN;Acc:ZDB-GENE-030131-3402]
77. asmtl ENSDARG00000021433, ENSDARG00000114151 550 1.692 - 0.973 - - - - 0.719 - - acetylserotonin O-methyltransferase-like [Source:ZFIN;Acc:ZDB-GENE-030131-2854]
78. PARD3B PARD3B 401 1.691 - 0.910 - 0.781 - - - - -
79. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 1.691 - - - - - - - 0.815 0.876 high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
80. ubr2 ENSDARG00000070164 3960 1.69 - - 0.921 0.769 - - - - - ubiquitin protein ligase E3 component n-recognin 2 [Source:ZFIN;Acc:ZDB-GENE-081107-29]
81. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.688 - - 0.924 0.764 - - - - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
82. ints8 ENSDARG00000057986 1063 1.687 - 0.951 - - - - 0.736 - - integrator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-050522-556]
83. paxip1 ENSDARG00000005606 1417 1.687 0.716 - 0.971 - - - - - - PAX interacting (with transcription-activation domain) protein 1 [Source:ZFIN;Acc:ZDB-GENE-041010-214]
84. kif5bb 1645 1.684 - - 0.887 - - - - - 0.797 kinesin family member 5B, b
85. pcdh19 ENSDARG00000034344 2378 1.683 - - - - - - - 0.839 0.844 protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
86. f2rl1.2 ENSDARG00000077540 822 1.682 - 0.733 0.949 - - - - - - coagulation factor II (thrombin) receptor-like 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070615-24]
87. gspt1 ENSDARG00000031048, ENSDARG00000109388 2735 1.68 0.734 0.946 - - - - - - - G1 to S phase transition 1 [Source:ZFIN;Acc:ZDB-GENE-040822-36]
88. rnf113a ENSDARG00000037930 849 1.676 0.719 - 0.957 - - - - - - ring finger protein 113A [Source:ZFIN;Acc:ZDB-GENE-040825-1]
89. bbs4 ENSDARG00000063522 247 1.676 - 0.969 - 0.707 - - - - - Bardet-Biedl syndrome 4 [Source:ZFIN;Acc:ZDB-GENE-060126-2]
90. med30 ENSDARG00000101115 133 1.674 - 0.966 - - - - 0.708 - - mediator complex subunit 30 [Source:ZFIN;Acc:ZDB-GENE-040426-1676]
91. ZBTB16 ZBTB16 3385 1.673 - 0.717 0.956 - - - - - -
92. id2a ENSDARG00000055283 7428 1.669 - - 0.885 - - 0.784 - - - inhibitor of DNA binding 2a [Source:ZFIN;Acc:ZDB-GENE-020910-1]
93. TMEM261 TMEM261 6529 1.669 - 0.723 0.946 - - - - - -
94. slbp ENSDARG00000100558 3405 1.668 - 0.911 - - - - - 0.757 - stem-loop binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9686]
95. ptpn13 ENSDARG00000103699 2866 1.668 - - 0.932 - - 0.736 - - - protein tyrosine phosphatase, non-receptor type 13 [Source:ZFIN;Acc:ZDB-GENE-070410-72]
96. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 1.665 - - - 0.813 - - - - 0.852 POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
97. zgc:85777 ENSDARG00000027009, ENSDARG00000112673 1499 1.663 - - 0.948 - - - 0.715 - - zgc:85777 [Source:ZFIN;Acc:ZDB-GENE-040426-2210]
98. GIT1 ENSDARG00000039489 1157 1.661 - 0.946 - - - 0.715 - - - G protein-coupled receptor kinase interacting ArfGAP 1 [Source:ZFIN;Acc:ZDB-GENE-100408-5]
99. znf710a ENSDARG00000014680 582 1.659 - 0.887 - 0.772 - - - - - zinc finger protein 710a [Source:ZFIN;Acc:ZDB-GENE-030131-5559]
100. npm1b ENSDARG00000037675 5448 1.656 - - 0.901 - - - - 0.755 - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]

There are 2180 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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