Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lca5

Gene Name Gene ID Reads Annotation
lca5 ENSDARG00000076153, ENSDARG00000114127 164 Leber congenital amaurosis 5 [Source:ZFIN;Acc:ZDB-GENE-090313-268]










Genes with expression patterns similar to lca5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lca5 ENSDARG00000076153, ENSDARG00000114127 164 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Leber congenital amaurosis 5 [Source:ZFIN;Acc:ZDB-GENE-090313-268]
2. KCNJ12 KCNJ12 17 1.741 0.828 - - - - 0.913 - - -
3. elavl2 ENSDARG00000040732 44 1.741 0.828 - - - - 0.913 - - - ELAV like neuron-specific RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040704-9]
4. kcnq2a ENSDARG00000075307 7 1.741 0.828 - - - - 0.913 - - - potassium voltage-gated channel, KQT-like subfamily, member 2a [Source:ZFIN;Acc:ZDB-GENE-080220-37]
5. CDH12_1 CDH12_1 57 1.718 0.828 - - - - 0.890 - - -
6. lingo4b ENSDARG00000078527 235 1.67 - 0.794 - - - 0.876 - - - leucine rich repeat and Ig domain containing 4b [Source:ZFIN;Acc:ZDB-GENE-091214-3]
7. TMC5 ENSDARG00000013252 22 1.666 0.828 - - - - - 0.838 - - transmembrane channel like 5 [Source:ZFIN;Acc:ZDB-GENE-120411-6]
8. gcnt4b ENSDARG00000077550 2 1.638 - - - - - 0.913 0.725 - - glucosaminyl (N-acetyl) transferase 4, core 2, b [Source:ZFIN;Acc:ZDB-GENE-091118-69]
9. CABZ01079804.1 ENSDARG00000117619 1 1.638 - - - - - 0.913 0.725 - -
10. tti2 ENSDARG00000073773 19 1.638 - - - - - 0.913 0.725 - - TELO2 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-110411-25]
11. cx32.3 ENSDARG00000041787 33 1.607 0.828 - - - - - 0.779 - - connexin 32.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1337]
12. parp12a ENSDARG00000042496 82 1.593 0.828 0.765 - - - - - - - poly (ADP-ribose) polymerase family, member 12a [Source:ZFIN;Acc:ZDB-GENE-050419-6]
13. nrip2 ENSDARG00000079985 505 1.576 - 0.762 - - - - 0.814 - - nuclear receptor interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9425]
14. kif6 ENSDARG00000053240 75 1.574 0.737 - - - - - 0.837 - - kinesin family member 6 [Source:ZFIN;Acc:ZDB-GENE-061027-130]
15. ENSDARG00000089100 ENSDARG00000089100 5 1.553 0.828 - - - - - 0.725 - -
16. slc7a9 ENSDARG00000005894 29 1.553 0.828 - - - - - 0.725 - - solute carrier family 7 (amino acid transporter light chain, bo,+ system), member 9 [Source:ZFIN;Acc:ZDB-GENE-080116-2]
17. ace ENSDARG00000079166 54 1.512 0.808 - - - - - 0.704 - - angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1826]
18. SLC4A5 9 1.505 - - - - - 0.780 0.725 - - solute carrier family 4 (sodium bicarbonate cotransporter), member 5, transcript variant X7
19. si:dkeyp-33b5.4 ENSDARG00000075057 185 1.461 0.751 - - - - - 0.710 - - si:dkeyp-33b5.4 [Source:ZFIN;Acc:ZDB-GENE-100618-4]
20. si:dkey-66g10.2 ENSDARG00000092845 28 1.447 - 0.722 - - - - 0.725 - - si:dkey-66g10.2 [Source:ZFIN;Acc:ZDB-GENE-090313-321]
21. ela2 ENSDARG00000056744, ENSDARG00000111667 73 1.447 - 0.722 - - - - 0.725 - - elastase 2 [Source:ZFIN;Acc:ZDB-GENE-041117-1]
22. slain1b ENSDARG00000104974 61 1.446 0.735 - - - - 0.711 - - - SLAIN motif family, member 1b [Source:ZFIN;Acc:ZDB-GENE-080516-6]
23. si:ch1073-170o4.1 ENSDARG00000092780 18 1 1.000 - - - - - - - - si:ch1073-170o4.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7012]
24. STAC ENSDARG00000074004 83 1 1.000 - - - - - - - - SH3 and cysteine rich domain [Source:ZFIN;Acc:ZDB-GENE-131121-459]
25. si:ch73-362m14.4 ENSDARG00000023940 88 1 1.000 - - - - - - - - si:ch73-362m14.4 [Source:ZFIN;Acc:ZDB-GENE-120215-30]
26. AL935046.1 AL935046.1 89 1 1.000 - - - - - - - -
27. si:ch211-214c7.4 ENSDARG00000069595 56 0.963 0.963 - - - - - - - - si:ch211-214c7.4 [Source:ZFIN;Acc:ZDB-GENE-030131-6275]
28. lrrc9 ENSDARG00000054352 25 0.959 - 0.959 - - - - - - - leucine rich repeat containing 9 [Source:ZFIN;Acc:ZDB-GENE-080917-56]
29. stat2 ENSDARG00000031647, ENSDARG00000116348 441 0.947 0.947 - - - - - - - - signal transducer and activator of transcription 2 [Source:ZFIN;Acc:ZDB-GENE-080321-1]
30. mb ENSDARG00000031952 351 0.941 - - - - - - 0.941 - - myoglobin [Source:ZFIN;Acc:ZDB-GENE-040426-1430]
31. map3k19 ENSDARG00000094272 59 0.938 - - - - - - 0.938 - - mitogen-activated protein kinase kinase kinase 19 [Source:ZFIN;Acc:ZDB-GENE-081104-140]
32. si:dkey-205h13.1 ENSDARG00000079307 90 0.934 - - - - - - 0.934 - - si:dkey-205h13.1 [Source:ZFIN;Acc:ZDB-GENE-090313-227]
33. svopa ENSDARG00000056833 14 0.93 - - - - - 0.930 - - - SV2 related protein a [Source:ZFIN;Acc:ZDB-GENE-060526-336]
34. kcnj1a.1 ENSDARG00000091232 110 0.929 - - - - - - 0.929 - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-031118-55]
35. atp1a1a.4 ENSDARG00000001870 1864 0.929 - - - - - - 0.929 - - ATPase Na+/K+ transporting subunit alpha 1a, tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-001212-4]
36. fxyd6 ENSDARG00000100971 51 0.923 - 0.923 - - - - - - - FXYD domain containing ion transport regulator 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5919]
37. slc12a3 ENSDARG00000013855 990 0.923 - - - - - - 0.923 - - solute carrier family 12 (sodium/chloride transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9505]
38. comta ENSDARG00000015337 93 0.923 - 0.923 - - - - - - - catechol-O-methyltransferase a [Source:ZFIN;Acc:ZDB-GENE-050913-117]
39. zfand4 ENSDARG00000076703, ENSDARG00000109957 411 0.923 - 0.923 - - - - - - - zinc finger, AN1-type domain 4 [Source:ZFIN;Acc:ZDB-GENE-090312-102]
40. enpp6 ENSDARG00000040469 187 0.918 0.918 - - - - - - - - ectonucleotide pyrophosphatase/phosphodiesterase 6 [Source:ZFIN;Acc:ZDB-GENE-031205-1]
41. hbs1l ENSDARG00000036778, ENSDARG00000115090 130 0.916 - - - - - 0.916 - - - HBS1-like translational GTPase [Source:ZFIN;Acc:ZDB-GENE-030131-2987]
42. setd6 ENSDARG00000043986, ENSDARG00000113991 194 0.916 - - - - - - 0.916 - - SET domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-1067]
43. vcpip1 ENSDARG00000060177 56 0.913 - - - - - 0.913 - - - valosin containing protein (p97)/p47 complex interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-070912-613]
44. U1_54 U1_54 0 0.913 - - - - - 0.913 - - -
45. fbxo36a ENSDARG00000010662, ENSDARG00000109843 13 0.913 - - - - - 0.913 - - - F-box protein 36a [Source:ZFIN;Acc:ZDB-GENE-060929-986]
46. ungb ENSDARG00000094922 16 0.913 - - - - - 0.913 - - - uracil DNA glycosylase b [Source:ZFIN;Acc:ZDB-GENE-070705-360]
47. ENSDARG00000089152 ENSDARG00000089152 12 0.913 - - - - - 0.913 - - -
48. si:ch73-27e22.3 ENSDARG00000077263 10 0.913 - - - - - 0.913 - - - si:ch73-27e22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-231]
49. si:ch211-198c19.1 ENSDARG00000089333 3 0.913 - - - - - 0.913 - - - si:ch211-198c19.1 [Source:ZFIN;Acc:ZDB-GENE-100922-218]
50. si:dkey-14o18.1 si:dkey-14o18.1 108 0.913 - - - - - 0.913 - - -
51. wu:fa26c03 18714 0.913 - - - - - 0.913 - - - wu:fa26c03
52. esyt1b ENSDARG00000014239 8 0.913 - - - - - 0.913 - - - extended synaptotagmin-like protein 1b [Source:ZFIN;Acc:ZDB-GENE-040724-209]
53. si:dkeyp-87d1.6 si:dkeyp-87d1.6 0 0.913 - - - - - 0.913 - - -
54. cbx7b ENSDARG00000087181 5 0.913 - - - - - 0.913 - - - chromobox homolog 7b [Source:ZFIN;Acc:ZDB-GENE-110613-2]
55. zgc:153921 ENSDARG00000020738, ENSDARG00000038405 34 0.913 - - - - - 0.913 - - - zgc:153921 [Source:ZFIN;Acc:ZDB-GENE-060929-816]
56. EGFR_1 EGFR_1 2 0.913 - - - - - 0.913 - - -
57. hbaa2 ENSDARG00000069735 10 0.913 - - - - - 0.913 - - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
58. si:ch211-145h19.1 31 0.913 - - - - - 0.913 - - - si:ch211-145h19.1
59. si:dkey-43b14.6 si:dkey-43b14.6 20 0.913 - - - - - 0.913 - - -
60. si:ch1073-185p12.2 ENSDARG00000100199 7 0.913 - - - - - 0.913 - - - si:ch1073-185p12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-196]
61. si:dkey-26h11.2 ENSDARG00000096458 10 0.913 - - - - - 0.913 - - - si:dkey-26h11.2 [Source:ZFIN;Acc:ZDB-GENE-120709-94]
62. fhl1a ENSDARG00000071498, ENSDARG00000115132 164 0.913 - - - - - 0.913 - - - four and a half LIM domains 1a [Source:ZFIN;Acc:ZDB-GENE-040206-1]
63. si:ch73-111e15.1 ENSDARG00000008182 2 0.913 - - - - - 0.913 - - - si:ch73-111e15.1 [Source:ZFIN;Acc:ZDB-GENE-110411-28]
64. slc4a4b ENSDARG00000044808 9 0.913 - - - - - 0.913 - - - solute carrier family 4 (sodium bicarbonate cotransporter), member 4b [Source:ZFIN;Acc:ZDB-GENE-091030-1]
65. BX005421.3 ENSDARG00000114309 7 0.913 - - - - - 0.913 - - -
66. si:dkey-118j18.3 si:dkey-118j18.3 4 0.913 - - - - - 0.913 - - -
67. si:ch73-381a20.2 si:ch73-381a20.2 11 0.913 - - - - - 0.913 - - -
68. BX571969.1 BX571969.1 8 0.913 - - - - - 0.913 - - -
69. BX569793.1 ENSDARG00000096832 0 0.913 - - - - - 0.913 - - -
70. dnmt3aa ENSDARG00000005394 63 0.913 - - - - - 0.913 - - - DNA (cytosine-5-)-methyltransferase 3 alpha a [Source:ZFIN;Acc:ZDB-GENE-050314-5]
71. napgl napgl 39 0.913 - - - - - 0.913 - - -
72. sdhaf1 ENSDARG00000092478 51 0.913 - - - - - 0.913 - - - succinate dehydrogenase complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-050809-56]
73. ENSDARG00000086666 ENSDARG00000086666 2159 0.913 - - - - - 0.913 - - -
74. si:ch211-173m16.2 ENSDARG00000093284 186 0.913 - - - - - 0.913 - - - si:ch211-173m16.2 [Source:ZFIN;Acc:ZDB-GENE-070912-155]
75. zgc:136902 zgc:136902 4 0.913 - - - - - 0.913 - - -
76. ei24 ENSDARG00000053840 78 0.913 - - - - - 0.913 - - - etoposide induced 2.4 [Source:ZFIN;Acc:ZDB-GENE-050417-457]
77. si:ch73-341k19.1 ENSDARG00000095946 5 0.913 - - - - - 0.913 - - - si:ch73-341k19.1 [Source:ZFIN;Acc:ZDB-GENE-110411-201]
78. si:ch211-207o17.8 si:ch211-207o17.8 1 0.913 - - - - - 0.913 - - -
79. ENSDARG00000091642 ENSDARG00000091642 14 0.913 - - - - - 0.913 - - -
80. zgc:195633_1 142 0.913 - - - - - 0.913 - - - zgc:195633
81. ptpn20 ENSDARG00000075459 1 0.913 - - - - - 0.913 - - - protein tyrosine phosphatase, non-receptor type 20 [Source:ZFIN;Acc:ZDB-GENE-090313-90]
82. TRIM14_11 TRIM14_11 2 0.913 - - - - - 0.913 - - -
83. NPM2 NPM2 41 0.913 - - - - - 0.913 - - -
84. CABZ01035647.1 CABZ01035647.1 5 0.913 - - - - - 0.913 - - -
85. AL928685.1 ENSDARG00000095786 0 0.913 - - - - - 0.913 - - -
86. si:dkey-20j1.5 si:dkey-20j1.5 1 0.913 - - - - - 0.913 - - -
87. si:dkey-117n7.4 ENSDARG00000092064 22 0.913 - - - - - 0.913 - - - si:dkey-117n7.4 [Source:ZFIN;Acc:ZDB-GENE-060503-237]
88. CAMSAP2 CAMSAP2 109 0.913 - - - - - 0.913 - - -
89. zeb1a ENSDARG00000016788 48 0.913 - - - - - 0.913 - - - zinc finger E-box binding homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-070912-124]
90. dmrt2b ENSDARG00000070013, ENSDARG00000114365, ENSDARG00000114967 57 0.913 - - - - - 0.913 - - - doublesex and mab-3 related transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-080813-1]
91. hel_dr4 hel_dr4 12 0.913 - - - - - 0.913 - - -
92. sp2 ENSDARG00000076763, ENSDARG00000113443, ENSDARG00000115477 20 0.913 - - - - - 0.913 - - - sp2 transcription factor [Source:ZFIN;Acc:ZDB-GENE-080410-1]
93. si:dkey-14d8.1 ENSDARG00000095332 11 0.913 - - - - - 0.913 - - - si:dkey-14d8.1 [Source:ZFIN;Acc:ZDB-GENE-041210-86]
94. si:ch211-225h9.2 si:ch211-225h9.2 16 0.913 - - - - - 0.913 - - -
95. abcc5 ENSDARG00000061233 60 0.913 - - - - - 0.913 - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 5 [Source:ZFIN;Acc:ZDB-GENE-050517-17]
96. CR847844.3 CR847844.3 1 0.913 - - - - - 0.913 - - -
97. apex2 ENSDARG00000008472 39 0.913 - - - - - 0.913 - - - APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Source:ZFIN;Acc:ZDB-GENE-040426-835]
98. adarb1b ENSDARG00000003544 31 0.913 - - - - - 0.913 - - - adenosine deaminase, RNA-specific, B1b [Source:ZFIN;Acc:ZDB-GENE-030219-15]
99. ntsr1 ENSDARG00000077577, ENSDARG00000112950 14 0.913 - - - - - 0.913 - - - neurotensin receptor 1 (high affinity) [Source:ZFIN;Acc:ZDB-GENE-090313-372]
100. mtmr10 ENSDARG00000010601 37 0.913 - - - - - 0.913 - - - myotubularin related protein 10 [Source:ZFIN;Acc:ZDB-GENE-061103-52]

There are 960 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA