Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lbx2

Gene Name Gene ID Reads Annotation
lbx2 ENSDARG00000025131 1388 ladybird homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-001206-2]










Genes with expression patterns similar to lbx2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lbx2 ENSDARG00000025131 1388 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ladybird homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-001206-2]
2. si:ch211-85n16.3 ENSDARG00000096346 1095 2.272 - 0.728 - - - 0.796 0.748 - - si:ch211-85n16.3 [Source:ZFIN;Acc:ZDB-GENE-120215-137]
3. prmt1 ENSDARG00000010246 11311 2.227 0.731 0.780 - - - - 0.716 - - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
4. si:ch73-21k16.6 si:ch73-21k16.6 4896 2.198 0.719 0.711 - - - - 0.768 - -
5. irx3b ENSDARG00000031138 2538 1.742 0.856 - - - - - 0.886 - - iroquois homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-030131-525]
6. pigu ENSDARG00000075530 348 1.697 - - - - - 0.873 0.824 - - phosphatidylinositol glycan anchor biosynthesis, class U [Source:ZFIN;Acc:ZDB-GENE-100629-1]
7. vat1 ENSDARG00000056481, ENSDARG00000111382 7389 1.662 - 0.778 - - - - 0.884 - - vesicle amine transport 1 [Source:ZFIN;Acc:ZDB-GENE-030616-178]
8. hoxb6a ENSDARG00000010630 1106 1.645 0.829 - - - - - 0.816 - - homeobox B6a [Source:ZFIN;Acc:ZDB-GENE-990415-106]
9. dyrk2 ENSDARG00000094646 2163 1.626 0.862 0.764 - - - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2804]
10. smtnl ENSDARG00000055632, ENSDARG00000109489 788 1.613 - 0.849 - - - - 0.764 - - smoothelin, like [Source:ZFIN;Acc:ZDB-GENE-040212-1]
11. gtpbp1 ENSDARG00000053467 1786 1.611 - 0.857 - 0.754 - - - - - GTP binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030909-12]
12. si:dkey-56e3.3 ENSDARG00000075194 491 1.592 0.849 - - 0.743 - - - - - si:dkey-56e3.3 [Source:ZFIN;Acc:ZDB-GENE-050411-91]
13. skor1b ENSDARG00000062448, ENSDARG00000112341 282 1.592 - - - - - - - 0.872 0.720 SKI family transcriptional corepressor 1b [Source:ZFIN;Acc:ZDB-GENE-050419-82]
14. si:ch73-308b14.1 si:ch73-308b14.1 1106 1.582 - 0.705 - - - 0.877 - - -
15. ercc5 ENSDARG00000023678 468 1.568 0.827 0.741 - - - - - - - excision repair cross-complementation group 5 [Source:ZFIN;Acc:ZDB-GENE-050327-28]
16. hcfc1b ENSDARG00000012519 3633 1.565 - 0.774 - - - - 0.791 - - host cell factor C1b [Source:ZFIN;Acc:ZDB-GENE-030131-2411]
17. tenm3 ENSDARG00000005479 3799 1.559 - 0.796 - - - - 0.763 - - teneurin transmembrane protein 3 [Source:ZFIN;Acc:ZDB-GENE-990714-19]
18. meis2b ENSDARG00000077840 5166 1.559 - - - 0.748 - - - 0.811 - Meis homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-000210-23]
19. GAB3 GAB3 72 1.552 - - - - - 0.766 0.786 - -
20. myog ENSDARG00000009438 2368 1.551 0.817 0.734 - - - - - - - myogenin [Source:ZFIN;Acc:ZDB-GENE-980526-265]
21. apex1 ENSDARG00000045843 6345 1.549 - 0.762 - - - - 0.787 - - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
22. tmem33 ENSDARG00000041332 2883 1.547 - - - 0.707 - - 0.840 - - transmembrane protein 33 [Source:ZFIN;Acc:ZDB-GENE-030131-5425]
23. CR387996.2 CR387996.2 1272 1.546 - 0.760 - - - - 0.786 - -
24. rhogc ENSDARG00000028401 2671 1.544 - - - 0.718 - - 0.826 - - ras homolog gene family, member Gc [Source:ZFIN;Acc:ZDB-GENE-030131-3402]
25. slc25a38b ENSDARG00000074533 354 1.543 - 0.731 - - - 0.812 - - - solute carrier family 25, member 38b [Source:ZFIN;Acc:ZDB-GENE-110214-1]
26. hoxb10a ENSDARG00000011579 2135 1.543 0.774 - - - - - 0.769 - - homeobox B10a [Source:ZFIN;Acc:ZDB-GENE-000328-2]
27. hsd17b10 ENSDARG00000017781 1793 1.538 - 0.774 - - - - 0.764 - - hydroxysteroid (17-beta) dehydrogenase 10 [Source:ZFIN;Acc:ZDB-GENE-041010-201]
28. slc5a3b ENSDARG00000077812 153 1.535 - - - 0.743 - - 0.792 - - solute carrier family 5 (sodium/myo-inositol cotransporter), member 3b [Source:ZFIN;Acc:ZDB-GENE-070912-43]
29. fam174b ENSDARG00000068709 1171 1.535 - 0.726 - - - - 0.809 - - family with sequence similarity 174, member B [Source:ZFIN;Acc:ZDB-GENE-050419-78]
30. mrpl46 ENSDARG00000016307 613 1.523 - 0.762 - - - - 0.761 - - mitochondrial ribosomal protein L46 [Source:ZFIN;Acc:ZDB-GENE-040718-224]
31. acss2 ENSDARG00000037781, ENSDARG00000112371 3100 1.519 - 0.766 - - - - 0.753 - - acyl-CoA synthetase short chain family member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-388]
32. mrpl48 ENSDARG00000035167 1008 1.519 - 0.757 - - - - 0.762 - - mitochondrial ribosomal protein L48 [Source:ZFIN;Acc:ZDB-GENE-041008-125]
33. CABZ01072954.1 CABZ01072954.1 2330 1.516 0.709 - - - - - 0.807 - -
34. tmem106bb ENSDARG00000035949, ENSDARG00000113700 1415 1.498 - 0.703 - - - - 0.795 - - transmembrane protein 106Bb [Source:ZFIN;Acc:ZDB-GENE-050913-37]
35. nae1 ENSDARG00000011301, ENSDARG00000111542 1505 1.497 - 0.725 - - - - 0.772 - - nedd8 activating enzyme E1 subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1552]
36. CU683901.1 CU683901.1 187 1.493 - - - 0.710 - - 0.783 - -
37. gas1b ENSDARG00000067984 1748 1.487 - 0.739 - - - - 0.748 - - growth arrest-specific 1b [Source:ZFIN;Acc:ZDB-GENE-050302-79]
38. znf280d ENSDARG00000077013 1387 1.487 - 0.784 - - - - 0.703 - - zinc finger protein 280D [Source:ZFIN;Acc:ZDB-GENE-030131-2260]
39. snrnp40 ENSDARG00000023160 1108 1.484 0.700 - - - - - 0.784 - - small nuclear ribonucleoprotein 40 (U5) [Source:ZFIN;Acc:ZDB-GENE-040426-978]
40. dip2a ENSDARG00000078058 1625 1.481 0.752 - - - - - 0.729 - - disco-interacting protein 2 homolog A [Source:ZFIN;Acc:ZDB-GENE-091204-2]
41. gpd1l ENSDARG00000040024 2182 1.479 - 0.776 - 0.703 - - - - - glycerol-3-phosphate dehydrogenase 1 like [Source:ZFIN;Acc:ZDB-GENE-041010-220]
42. Sep-06 Sep-06 5465 1.478 - 0.715 - - - - 0.763 - -
43. prpf8 ENSDARG00000026180 7026 1.478 0.776 - - 0.702 - - - - - pre-mRNA processing factor 8 [Source:ZFIN;Acc:ZDB-GENE-030131-577]
44. eif3d ENSDARG00000021257 1524 1.477 - - - 0.744 - - 0.733 - - eukaryotic translation initiation factor 3, subunit D [Source:ZFIN;Acc:ZDB-GENE-030131-8442]
45. exosc10 ENSDARG00000037708, ENSDARG00000115953 1121 1.469 - 0.729 - 0.740 - - - - - exosome component 10 [Source:ZFIN;Acc:ZDB-GENE-040426-781]
46. myf5 ENSDARG00000007277 1051 1.456 - - - - - 0.728 0.728 - - myogenic factor 5 [Source:ZFIN;Acc:ZDB-GENE-000616-6]
47. hoxb2a ENSDARG00000000175 1122 1.455 - - - - - - - 0.749 0.706 homeobox B2a [Source:ZFIN;Acc:ZDB-GENE-990415-103]
48. CABZ01080370.1 CABZ01080370.1 58 1.455 - - - - - 0.753 0.702 - -
49. ddc ENSDARG00000016494 93 1.447 - - - - - 0.716 0.731 - - dopa decarboxylase [Source:ZFIN;Acc:ZDB-GENE-040426-2656]
50. srek1 ENSDARG00000009764, ENSDARG00000114600 319 1.447 - 0.713 - - - - 0.734 - - splicing regulatory glutamine/lysine-rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-040801-132]
51. desi2 ENSDARG00000004460 1593 1.443 - 0.740 - - - - 0.703 - - desumoylating isopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-040801-39]
52. mocs3 ENSDARG00000008239 163 1.44 0.710 - - - - - 0.730 - - molybdenum cofactor synthesis 3 [Source:ZFIN;Acc:ZDB-GENE-040426-782]
53. rbmx ENSDARG00000014244 3445 1.439 - 0.730 - - - - 0.709 - - RNA binding motif protein X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-579]
54. dnmt3 dnmt3 1912 1.435 - - - 0.719 - - 0.716 - -
55. c1qtnf9 ENSDARG00000058318, ENSDARG00000112904 1274 1.434 - 0.708 - - - - 0.726 - - C1q and TNF related 9 [Source:ZFIN;Acc:ZDB-GENE-080303-33]
56. atf7ip ENSDARG00000069619 5495 1.426 0.707 - - - - - 0.719 - - activating transcription factor 7 interacting protein [Source:ZFIN;Acc:ZDB-GENE-061103-178]
57. xrcc5_1 ENSDARG00000099298 1533 1.419 0.709 - - - - - 0.710 - - X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:ZFIN;Acc:ZDB-GENE-041008-108]
58. far1 ENSDARG00000006899 204 1.419 - - - 0.702 - 0.717 - - - fatty acyl CoA reductase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2908]
59. COX18 ENSDARG00000102463 602 1.415 - 0.714 - - - - 0.701 - - cytochrome c oxidase assembly factor COX18 [Source:ZFIN;Acc:ZDB-GENE-080204-88]
60. si:ch211-238e22.1 si:ch211-238e22.1 1032 0.932 - - - - - - 0.932 - -
61. ERGIC2 ENSDARG00000051936, ENSDARG00000111918 244 0.923 - - - - - 0.923 - - - ERGIC and golgi 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1331]
62. ift46 ENSDARG00000011240 2499 0.923 - - - - - - 0.923 - - intraflagellar transport 46 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-080102-3]
63. PIGW ENSDARG00000079244 118 0.92 - - - - - 0.920 - - - phosphatidylinositol glycan anchor biosynthesis, class W [Source:ZFIN;Acc:ZDB-GENE-080204-94]
64. CCDC114 ENSDARG00000015010 190 0.918 - - - - - - 0.918 - - coiled-coil domain containing 114 [Source:ZFIN;Acc:ZDB-GENE-041114-110]
65. GDPD4_1 GDPD4_1 190 0.916 - - - - - 0.916 - - -
66. cog2 ENSDARG00000004037 462 0.912 - - - - - 0.912 - - - component of oligomeric golgi complex 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2671]
67. mettl10 131 0.907 - - - - - - 0.907 - - methyltransferase like 10, transcript variant X1
68. si:dkey-25o16.2 1990 0.904 - 0.904 - - - - - - - si:dkey-25o16.2, transcript variant X1
69. kremen1 ENSDARG00000062579 190 0.903 - - - - - 0.903 - - - kringle containing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-070705-262]
70. si:ch211-254c8.2 233 0.9 - - - - - 0.900 - - - si:ch211-254c8.2, transcript variant X4
71. nop58 ENSDARG00000104353 8497 0.891 - - - - - - 0.891 - - NOP58 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2140]
72. BX950186.2 BX950186.2 1267 0.89 - - - - - - 0.890 - -
73. med20 ENSDARG00000046006 614 0.89 0.890 - - - - - - - - mediator complex subunit 20 [Source:ZFIN;Acc:ZDB-GENE-040801-104]
74. IPP ENSDARG00000075339 194 0.89 - - - - - - 0.890 - - intracisternal A particle-promoted polypeptide [Source:ZFIN;Acc:ZDB-GENE-080204-28]
75. zgc:110353 ENSDARG00000039443 80 0.888 - - - - - 0.888 - - - zgc:110353 [Source:ZFIN;Acc:ZDB-GENE-050417-310]
76. dhfr ENSDARG00000004251 1824 0.886 - - - - - - 0.886 - - dihydrofolate reductase [Source:ZFIN;Acc:ZDB-GENE-010406-5]
77. CBLC ENSDARG00000078217 96 0.885 - - - - - 0.885 - - - Cbl proto-oncogene C, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-080220-20]
78. taf1a ENSDARG00000052471 252 0.885 - - - - - - 0.885 - - TATA box binding protein (TBP)-associated factor, RNA polymerase I, A [Source:ZFIN;Acc:ZDB-GENE-041014-272]
79. zbtb1 ENSDARG00000023040, ENSDARG00000112571 211 0.883 - - - - - - 0.883 - - zinc finger and BTB domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041001-126]
80. NAV2 NAV2 538 0.882 - - - - - 0.882 - - -
81. si:ch211-198b3.1 si:ch211-198b3.1 765 0.88 - - - - - - 0.880 - -
82. abcf2a ENSDARG00000038785 2065 0.876 - - - - - - 0.876 - - ATP-binding cassette, sub-family F (GCN20), member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8714]
83. ints1 ENSDARG00000100419 1958 0.876 - - - - - - 0.876 - - integrator complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6523]
84. CU571169.5 CU571169.5 353 0.875 - - - - - - 0.875 - -
85. josd2 ENSDARG00000057626, ENSDARG00000111978 273 0.874 - - - - - 0.874 - - - Josephin domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-850]
86. fth1b ENSDARG00000007975 96 0.873 - - - - - - 0.873 - - ferritin, heavy polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040912-30]
87. brwd1 ENSDARG00000074747, ENSDARG00000111353 1008 0.873 - - - - - - 0.873 - - bromodomain and WD repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041111-120]
88. rabep1 ENSDARG00000059600, ENSDARG00000110933 1003 0.872 - - - - - 0.872 - - - rabaptin, RAB GTPase binding effector protein 1 [Source:ZFIN;Acc:ZDB-GENE-060526-165]
89. taf6l ENSDARG00000079684 1408 0.871 - - - - - 0.871 - - - TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-6789]
90. supt6h ENSDARG00000006524 3221 0.868 - 0.868 - - - - - - - SPT6 homolog, histone chaperone [Source:ZFIN;Acc:ZDB-GENE-030131-7949]
91. pin4 ENSDARG00000004527 3598 0.868 - 0.868 - - - - - - - protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) [Source:ZFIN;Acc:ZDB-GENE-050522-117]
92. efnb3a ENSDARG00000112993 399 0.868 - - - - - - 0.868 - - ephrin-B3a [Source:ZFIN;Acc:ZDB-GENE-100316-1]
93. gadd45ab ENSDARG00000104571, ENSDARG00000110532 770 0.867 - - - - - 0.867 - - - growth arrest and DNA-damage-inducible, alpha, b [Source:ZFIN;Acc:ZDB-GENE-040704-60]
94. CU638737.1 CU638737.1 17 0.866 - - - - - 0.866 - - -
95. C3 C3 46 0.866 - - - - - 0.866 - - -
96. si:dkey-150k17.2 si:dkey-150k17.2 40 0.866 - - - - - 0.866 - - -
97. nr1d4b ENSDARG00000059370 243 0.866 - - - - - - 0.866 - - nuclear receptor subfamily 1, group D, member 4b [Source:ZFIN;Acc:ZDB-GENE-080403-6]
98. mad1l1 ENSDARG00000033852 464 0.864 - - - - - 0.864 - - - mitotic arrest deficient 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1081]
99. si:ch73-49p17.1 69 0.863 - - - - - 0.863 - - - si:ch73-49p17.1
100. CR759921.2 CR759921.2 583 0.863 - - - - - - 0.863 - -

There are 1255 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA