Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lbx1b

Gene Name Gene ID Reads Annotation
lbx1b ENSDARG00000018611 399 ladybird homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050309-27]










Genes with expression patterns similar to lbx1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lbx1b ENSDARG00000018611 399 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ladybird homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050309-27]
2. adam23a ENSDARG00000062323 580 2.655 0.883 0.957 - - - 0.815 - - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
3. gng3 ENSDARG00000009553 2530 2.65 0.845 0.914 - - - 0.891 - - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
4. KCNB2 ENSDARG00000088842 35 2.58 - 0.796 - 0.851 - 0.933 - - - potassium voltage-gated channel subfamily B member 2 [Source:HGNC Symbol;Acc:HGNC:6232]
5. si:ch211-152f6.6 si:ch211-152f6.6 278 2.55 0.890 0.922 - - - 0.738 - - -
6. jag1a ENSDARG00000030289 1275 2.466 0.876 0.885 - - - 0.705 - - - jagged 1a [Source:ZFIN;Acc:ZDB-GENE-011128-2]
7. scn2b ENSDARG00000101713 796 2.463 0.711 0.879 - - - 0.873 - - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
8. scdb ENSDARG00000030265 271 2.457 0.856 0.877 - 0.724 - - - - - stearoyl-CoA desaturase b [Source:ZFIN;Acc:ZDB-GENE-050522-12]
9. npb ENSDARG00000078828 230 2.423 0.845 0.872 - - - 0.706 - - - neuropeptide B [Source:ZFIN;Acc:ZDB-GENE-040107-40]
10. NPAS3 ENSDARG00000109820 362 2.405 0.898 0.789 - - - 0.718 - - - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
11. rbfox3 rbfox3 1443 2.378 0.779 0.810 - - - 0.789 - - -
12. camk1db ENSDARG00000017446 47 2.338 - 0.789 - 0.840 - - 0.709 - - calcium/calmodulin-dependent protein kinase 1Db [Source:ZFIN;Acc:ZDB-GENE-070112-1872]
13. TUBB8P7_1 TUBB8P7_1 2722 2.333 0.803 0.779 - - - 0.751 - - -
14. dbx2 2971 2.331 0.888 0.720 - - - 0.723 - - - developing brain homeobox 2
15. snap25a ENSDARG00000020609 4537 2.328 0.746 0.854 - - - 0.728 - - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
16. MCTP1 MCTP1 219 2.318 0.752 0.808 - - - 0.758 - - -
17. RIMS1 RIMS1 9 2.318 0.763 0.789 - - - 0.766 - - -
18. SYT2 ENSDARG00000014169 265 2.288 0.812 0.771 - - - 0.705 - - - synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
19. sall3b ENSDARG00000057586 982 2.273 - 0.760 - 0.742 - 0.771 - - - spalt-like transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9140]
20. efemp2b_1 ENSDARG00000020811 77 2.258 0.763 0.729 - - - 0.766 - - - EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
21. thsd7a thsd7a 194 2.207 0.752 0.714 - - - 0.741 - - -
22. mapk11 ENSDARG00000045836 846 2.179 0.701 0.750 - - - 0.728 - - - mitogen-activated protein kinase 11 [Source:ZFIN;Acc:ZDB-GENE-040625-75]
23. vsnl1a ENSDARG00000023228 1584 1.893 0.951 0.942 - - - - - - - visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
24. BAI1_1 BAI1_1 57 1.828 - 0.936 - - - 0.892 - - -
25. mapk10 ENSDARG00000102730 108 1.821 - - - - - 0.984 0.837 - - mitogen-activated protein kinase 10 [Source:ZFIN;Acc:ZDB-GENE-051120-117]
26. amigo3 ENSDARG00000074469 39 1.818 - 0.821 - - - 0.997 - - - adhesion molecule with Ig-like domain 3 [Source:ZFIN;Acc:ZDB-GENE-050208-449]
27. neto1l ENSDARG00000071596 57 1.78 0.903 - - - - 0.877 - - - neuropilin (NRP) and tolloid (TLL)-like 1, like [Source:ZFIN;Acc:ZDB-GENE-091207-1]
28. uckl1a ENSDARG00000001686 21 1.771 - 0.789 - - - 0.982 - - - uridine-cytidine kinase 1-like 1a [Source:ZFIN;Acc:ZDB-GENE-040724-238]
29. lbx1a ENSDARG00000018321 634 1.766 0.867 - - - - 0.899 - - - ladybird homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040724-40]
30. dusp3a ENSDARG00000061255, ENSDARG00000113934 328 1.758 0.879 0.879 - - - - - - - dual specificity phosphatase 3a [Source:ZFIN;Acc:ZDB-GENE-111207-3]
31. bhlhe22 ENSDARG00000058039 1673 1.758 0.889 - - - - 0.869 - - - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
32. prdm14 ENSDARG00000045371 106 1.755 - 0.789 - - - 0.966 - - - PR domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2709]
33. panx1b ENSDARG00000014910, ENSDARG00000112399 136 1.746 0.944 - - 0.802 - - - - - pannexin 1b [Source:ZFIN;Acc:ZDB-GENE-070705-192]
34. ntrk2a ENSDARG00000059897 185 1.743 0.775 - - - - 0.968 - - - neurotrophic tyrosine kinase, receptor, type 2a [Source:ZFIN;Acc:ZDB-GENE-010126-1]
35. NPDC1 NPDC1 126 1.742 0.763 0.979 - - - - - - -
36. rgs7 rgs7 208 1.723 0.801 0.922 - - - - - - -
37. slc17a6b ENSDARG00000041150 823 1.718 0.929 0.789 - - - - - - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
38. tmem179 ENSDARG00000013292 343 1.716 - 0.922 - - - 0.794 - - - transmembrane protein 179 [Source:ZFIN;Acc:ZDB-GENE-040808-25]
39. cspg5a ENSDARG00000069981 1699 1.713 0.893 - - - - 0.820 - - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
40. TRPC4_1 TRPC4_1 212 1.707 0.918 0.789 - - - - - - -
41. lrrc4.1 ENSDARG00000069402 323 1.707 - 0.936 - - - 0.771 - - - leucine rich repeat containing 4.1 [Source:ZFIN;Acc:ZDB-GENE-041210-129]
42. scn8aa ENSDARG00000005775 792 1.707 0.767 0.940 - - - - - - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
43. syt11a ENSDARG00000057913 1145 1.703 0.795 0.908 - - - - - - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
44. amph ENSDARG00000007663 599 1.699 0.820 0.879 - - - - - - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
45. scrt2 ENSDARG00000056175 4331 1.697 0.866 0.831 - - - - - - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
46. gpr85 ENSDARG00000068701, ENSDARG00000116501 372 1.697 - 0.956 - - - 0.741 - - - G protein-coupled receptor 85 [Source:ZFIN;Acc:ZDB-GENE-000710-2]
47. C1QL4 C1QL4 93 1.695 0.752 - - - - 0.943 - - -
48. SPOCK1 ENSDARG00000074644 794 1.692 0.896 - - - - 0.796 - - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
49. sox12 ENSDARG00000025847 681 1.692 0.903 0.789 - - - - - - - SRY (sex determining region Y)-box 12 [Source:ZFIN;Acc:ZDB-GENE-040724-33]
50. mlphb ENSDARG00000062481 14 1.692 - - - - - 0.983 0.709 - - melanophilin b [Source:ZFIN;Acc:ZDB-GENE-070803-2]
51. C18H15orf59 C18H15orf59 80 1.69 - 0.789 - - - 0.901 - - -
52. syt2a ENSDARG00000025206 681 1.684 0.907 0.777 - - - - - - - synaptotagmin IIa [Source:ZFIN;Acc:ZDB-GENE-060503-315]
53. SKOR2 SKOR2 1041 1.683 - 0.746 - - - 0.937 - - -
54. BX000430.1 ENSDARG00000112057 135 1.682 0.763 - - - - 0.919 - - - phospholipid phosphatase related 3b [Source:NCBI gene;Acc:570173]
55. si:dkeyp-77h1.4 ENSDARG00000058248 54 1.681 - 0.936 - - - 0.745 - - - si:dkeyp-77h1.4 [Source:ZFIN;Acc:ZDB-GENE-050208-18]
56. stx1b ENSDARG00000000503 2724 1.68 - 0.943 - - - 0.737 - - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
57. sv2bb ENSDARG00000060711 196 1.679 0.809 0.870 - - - - - - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
58. negr1 ENSDARG00000021607 1051 1.678 0.921 - - - - 0.757 - - - neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
59. gria4b ENSDARG00000059368, ENSDARG00000114212, ENSDARG00000115594 255 1.678 - 0.789 - - - 0.889 - - - glutamate receptor, ionotropic, AMPA 4b [Source:ZFIN;Acc:ZDB-GENE-030131-8013]
60. PCDH9 ENSDARG00000063264 1309 1.677 0.726 0.951 - - - - - - - protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1]
61. mir15a-1 36 1.677 0.763 0.914 - - - - - - - microRNA 15a-1
62. gpr19 ENSDARG00000102226 17 1.677 0.763 0.914 - - - - - - - G protein-coupled receptor 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1295]
63. CU179656.1 ENSDARG00000107086 270 1.672 0.773 0.899 - - - - - - -
64. ncam2 ENSDARG00000017466 175 1.67 0.827 - - - - 0.843 - - - neural cell adhesion molecule 2 [Source:ZFIN;Acc:ZDB-GENE-010822-1]
65. vamp1 ENSDARG00000031283 3094 1.669 0.906 - - - - 0.763 - - - vesicle-associated membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2725]
66. phactr3a ENSDARG00000058243 150 1.669 - - - 0.789 - 0.880 - - - phosphatase and actin regulator 3a [Source:ZFIN;Acc:ZDB-GENE-080220-4]
67. 5S_rRNA_7 5S_rRNA_7 55 1.665 - 0.732 - - - 0.933 - - -
68. APBB3 ENSDARG00000053771 654 1.662 0.802 - - - - 0.860 - - - amyloid beta (A4) precursor protein-binding, family B, member 3 [Source:ZFIN;Acc:ZDB-GENE-140106-53]
69. scube2 ENSDARG00000037362 2833 1.661 0.912 - - - - 0.749 - - - signal peptide, CUB domain, EGF-like 2 [Source:ZFIN;Acc:ZDB-GENE-050302-80]
70. slc32a1 ENSDARG00000059775 1092 1.661 - 0.953 - - - 0.708 - - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
71. pcsk1nl ENSDARG00000076170 1232 1.657 0.718 0.939 - - - - - - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
72. fgf13b ENSDARG00000056633 455 1.657 0.894 - - - - 0.763 - - - fibroblast growth factor 13b [Source:ZFIN;Acc:ZDB-GENE-040426-1793]
73. atp1a3a ENSDARG00000018259 5393 1.656 - 0.866 - - - 0.790 - - - ATPase Na+/K+ transporting subunit alpha 3a [Source:ZFIN;Acc:ZDB-GENE-001212-7]
74. ncam1b ENSDARG00000007220 233 1.654 - - - 0.866 - 0.788 - - - neural cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-010822-2]
75. cacng2b ENSDARG00000102376 213 1.654 0.740 0.914 - - - - - - - calcium channel, voltage-dependent, gamma subunit 2b [Source:ZFIN;Acc:ZDB-GENE-090624-3]
76. C9H3orf17 C9H3orf17 69 1.646 0.932 - - - - - 0.714 - -
77. diaph2 ENSDARG00000076060 26 1.645 - 0.936 - - - - 0.709 - - diaphanous-related formin 2 [Source:ZFIN;Acc:ZDB-GENE-090115-1]
78. hoxb6b ENSDARG00000026513, ENSDARG00000111786 544 1.643 - 0.837 - - - 0.806 - - - homeobox B6b [Source:ZFIN;Acc:ZDB-GENE-000823-7]
79. SNAP91 ENSDARG00000098809 556 1.642 - 0.890 - - - 0.752 - - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
80. mir219-3 46 1.639 0.804 - - - - - 0.835 - - microRNA 219-3
81. myrip ENSDARG00000038814 103 1.637 0.763 - - - - 0.874 - - - myosin VIIA and Rab interacting protein [Source:ZFIN;Acc:ZDB-GENE-080123-1]
82. ptf1a ENSDARG00000014479 349 1.635 - 0.789 - - - 0.846 - - - pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
83. nadl1.1 1200 1.631 0.766 0.865 - - - - - - - neural adhesion molecule L1.1, transcript variant X1
84. syngr3a ENSDARG00000014871 405 1.631 0.815 - - - - 0.816 - - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
85. syt4 ENSDARG00000036505 421 1.629 - 0.752 - - - 0.877 - - - synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297]
86. MAPK8IP1_1 MAPK8IP1_1 186 1.626 0.920 - - - - 0.706 - - -
87. lhx1a ENSDARG00000014018 958 1.625 - 0.701 - - - 0.924 - - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
88. rtn1b ENSDARG00000021143 1682 1.624 0.804 0.820 - - - - - - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
89. clstn3 ENSDARG00000073883 590 1.623 0.787 - - - - 0.836 - - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]
90. slc8a2b ENSDARG00000100592 598 1.621 0.749 - - - - 0.872 - - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
91. bdnf ENSDARG00000018817 193 1.62 - 0.789 - - - 0.831 - - - brain-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-000412-1]
92. gap43 ENSDARG00000099744 4114 1.619 0.831 0.788 - - - - - - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
93. KCNG2 ENSDARG00000035961 58 1.617 0.828 0.789 - - - - - - - potassium voltage-gated channel, subfamily G, member 2 [Source:ZFIN;Acc:ZDB-GENE-100701-1]
94. nkx1.2lb ENSDARG00000099427 220 1.615 0.792 0.823 - - - - - - - NK1 transcription factor related 2-like,b [Source:ZFIN;Acc:ZDB-GENE-040615-2]
95. irx1b ENSDARG00000056594 2224 1.612 0.839 - - 0.773 - - - - - iroquois homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010716-1]
96. calb1 ENSDARG00000031598 252 1.611 - 0.789 - - - 0.822 - - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
97. B4GALNT1 B4GALNT1 352 1.61 0.744 0.866 - - - - - - -
98. zgc:109889 ENSDARG00000069600, ENSDARG00000113538 554 1.607 0.749 - - - - 0.858 - - - zgc:109889 [Source:ZFIN;Acc:ZDB-GENE-050522-547]
99. vamp2 ENSDARG00000056877 2158 1.606 - 0.748 - - - 0.858 - - - vesicle-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8225]
100. kcnd1 ENSDARG00000074746 153 1.605 0.851 - - - - 0.754 - - - potassium voltage-gated channel, Shal-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-081105-40]

There are 1669 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA