Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lbr

Gene Name Gene ID Reads Annotation
lbr ENSDARG00000014013 4835 lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]










Genes with expression patterns similar to lbr

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lbr ENSDARG00000014013 4835 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]
2. inip ENSDARG00000028523 1925 3.351 - - 0.901 - 0.704 - - 0.957 0.789 ints3 and nabp interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-961]
3. ncapd2 ENSDARG00000005058 2819 3.343 - - - 0.803 0.780 - - 0.963 0.797 non-SMC condensin I complex, subunit D2 [Source:ZFIN;Acc:ZDB-GENE-050506-59]
4. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 3.217 - - 0.803 0.762 - - 0.779 - 0.873 splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
5. TAF15 ENSDARG00000070019 5102 3.188 - - - 0.794 0.783 0.761 - - 0.850 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
6. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 3.174 0.748 - 0.868 - - - 0.745 - 0.813 pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
7. lypla2 ENSDARG00000053656 8971 3.017 0.789 - - - 0.715 - 0.754 - 0.759 lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
8. myef2 ENSDARG00000059398 6050 2.984 - - - 0.708 0.765 - 0.765 - 0.746 myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
9. ZBTB16 ZBTB16 3385 2.662 0.845 - 0.938 - - - - 0.879 -
10. nop10 ENSDARG00000104227 2463 2.582 0.792 - 0.828 - - - - 0.962 - NOP10 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-041007-4]
11. setdb1a ENSDARG00000041243 1952 2.569 - - 0.918 - 0.725 - - 0.926 - SET domain, bifurcated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2421]
12. ccne2 ENSDARG00000098529 4695 2.548 0.846 - 0.957 0.745 - - - - - cyclin E2 [Source:ZFIN;Acc:ZDB-GENE-030131-9689]
13. tuba1c ENSDARG00000055216 8384 2.497 - - 0.949 - 0.791 - - - 0.757 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
14. sf1 ENSDARG00000008188 5142 2.476 - - - 0.793 - - 0.861 - 0.822 splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
15. max ENSDARG00000024844 6035 2.465 - - 0.893 - - - 0.777 - 0.795 myc associated factor X [Source:ZFIN;Acc:ZDB-GENE-990415-152]
16. smarca5 ENSDARG00000052348 15433 2.46 - - - - - - 0.709 0.884 0.867 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
17. creb1a ENSDARG00000053586 5068 2.46 - - - - 0.724 - - 0.916 0.820 cAMP responsive element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-750]
18. puf60a ENSDARG00000032175 5618 2.457 - - - - - - 0.726 0.969 0.762 poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
19. hira ENSDARG00000013434 2204 2.455 - - 0.937 0.772 0.746 - - - - histone cell cycle regulator a [Source:ZFIN;Acc:ZDB-GENE-030131-6296]
20. akirin2 ENSDARG00000058729 13245 2.443 0.821 - 0.821 - - - 0.801 - - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
21. ss18 ENSDARG00000002970 2618 2.428 - - 0.947 - 0.737 - 0.744 - - synovial sarcoma translocation, chromosome 18 (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-030131-4867]
22. hat1 ENSDARG00000034916 5712 2.425 0.795 - - - - - 0.738 0.892 - histone acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-99]
23. mad2l1 ENSDARG00000004713 3398 2.421 0.783 - 0.910 - - - - - 0.728 MAD2 mitotic arrest deficient-like 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030515-3]
24. lfng ENSDARG00000037879 11783 2.414 - - 0.743 - - - - 0.876 0.795 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
25. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 2.401 - - 0.916 0.771 - - - 0.714 - meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
26. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 2.388 - - - - 0.717 0.852 - - 0.819 TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
27. smg7 ENSDARG00000060767 2759 2.371 - - - - - - 0.755 0.880 0.736 SMG7 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9122]
28. top2a ENSDARG00000024488 4273 2.369 - - - - - 0.809 0.705 - 0.855 DNA topoisomerase II alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2453]
29. si:ch211-218c6.8 ENSDARG00000092364 1270 2.365 0.716 - - - - 0.711 - 0.938 - si:ch211-218c6.8 [Source:ZFIN;Acc:ZDB-GENE-050419-103]
30. smarcc1a ENSDARG00000017397 2957 2.358 0.827 - - 0.822 0.709 - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1a [Source:ZFIN;Acc:ZDB-GENE-080514-3]
31. dlb ENSDARG00000004232 5120 2.354 - - - 0.745 0.774 - - - 0.835 deltaB [Source:ZFIN;Acc:ZDB-GENE-980526-114]
32. bag6 ENSDARG00000075892 3782 2.337 0.850 - - - - 0.749 0.738 - - BCL2 associated athanogene 6 [Source:ZFIN;Acc:ZDB-GENE-010501-5]
33. FAM168B ENSDARG00000101733, ENSDARG00000113953, ENSDARG00000115746 2175 2.332 - 0.791 - - - 0.710 - - 0.831 family with sequence similarity 168, member B [Source:ZFIN;Acc:ZDB-GENE-060929-180]
34. fbxl14a ENSDARG00000034497, ENSDARG00000110327 3132 2.326 - 0.705 0.904 - - - 0.717 - - F-box and leucine-rich repeat protein 14a [Source:ZFIN;Acc:ZDB-GENE-030131-5920]
35. trrap ENSDARG00000100623 3429 2.313 - 0.824 - - - - 0.769 - 0.720 transformation/transcription domain-associated protein [Source:ZFIN;Acc:ZDB-GENE-050809-47]
36. stag2b ENSDARG00000053668, ENSDARG00000109728 7193 2.31 - - - 0.732 - - 0.843 - 0.735 stromal antigen 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2785]
37. PATZ1 ENSDARG00000076584 1116 2.309 - - 0.893 - - - 0.701 - 0.715 POZ (BTB) and AT hook containing zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-111223-4]
38. cdk2ap2 ENSDARG00000103145 8024 2.306 - - - 0.715 - - 0.759 - 0.832 cyclin-dependent kinase 2 associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040718-35]
39. r3hdm1 ENSDARG00000101458 5241 2.303 - - - - - - 0.765 0.824 0.714 R3H domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7119]
40. hmgn3 ENSDARG00000036754, ENSDARG00000116728 11573 2.294 - - 0.827 - - - 0.716 - 0.751 high mobility group nucleosomal binding domain 3 [Source:ZFIN;Acc:ZDB-GENE-041114-180]
41. Sep-06 Sep-06 5465 2.293 0.783 - - - - - 0.769 - 0.741
42. MKI67 ENSDARG00000091150 11038 2.289 - - 0.775 - - - 0.755 - 0.759 marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
43. ogt.1 ENSDARG00000099455, ENSDARG00000105243 3274 2.284 - - - - - - 0.700 0.865 0.719 O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9631]
44. plk1 ENSDARG00000058471, ENSDARG00000111745 7020 2.28 - - - - 0.734 - 0.796 0.750 - polo-like kinase 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-021115-7]
45. kpnb3 ENSDARG00000040245 7967 2.211 - 0.725 - 0.773 - - - 0.713 - karyopherin (importin) beta 3 [Source:ZFIN;Acc:ZDB-GENE-030424-2]
46. bub3 ENSDARG00000075883 1333 2.21 0.780 0.728 - 0.702 - - - - - BUB3 mitotic checkpoint protein [Source:ZFIN;Acc:ZDB-GENE-041010-210]
47. eif2s1a ENSDARG00000005827 5992 2.195 - - - 0.706 - - 0.751 - 0.738 eukaryotic translation initiation factor 2, subunit 1 alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-526]
48. ncaph ENSDARG00000061468, ENSDARG00000113773 1401 2.19 - 0.713 - 0.766 - - - - 0.711 non-SMC condensin I complex, subunit H [Source:ZFIN;Acc:ZDB-GENE-070112-652]
49. bud31 ENSDARG00000017084 3892 2.183 - - - - - 0.704 0.763 - 0.716 BUD31 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040720-3]
50. psma4 ENSDARG00000045928 5112 2.158 0.735 - - - - - 0.722 - 0.701 proteasome subunit alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1932]
51. gnaia ENSDARG00000044760, ENSDARG00000109225 2062 2.124 - 0.707 - 0.709 - - 0.708 - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide a [Source:ZFIN;Acc:ZDB-GENE-030131-2229]
52. polb ENSDARG00000003749 2049 1.881 - - 0.922 - - - - 0.959 - polymerase (DNA directed), beta [Source:ZFIN;Acc:ZDB-GENE-040830-1]
53. fkbp8 ENSDARG00000001734 1709 1.862 - - 0.899 - - - - 0.963 - FK506 binding protein 8 [Source:ZFIN;Acc:ZDB-GENE-040426-1849]
54. wu:fb17g07 wu:fb17g07 10567 1.828 - - 0.915 - - - - 0.913 -
55. pex5 ENSDARG00000070654, ENSDARG00000116156, ENSDARG00000116397 1427 1.822 - - 0.886 - - - - 0.936 - peroxisomal biogenesis factor 5 [Source:ZFIN;Acc:ZDB-GENE-040426-981]
56. syncripl ENSDARG00000026723 3889 1.822 0.882 - - - - - - 0.940 - synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
57. ptges3a ENSDARG00000037284, ENSDARG00000113517 3999 1.795 - - 0.866 - - - - 0.929 - prostaglandin E synthase 3a (cytosolic) [Source:ZFIN;Acc:ZDB-GENE-040426-2200]
58. suz12a ENSDARG00000070256 2229 1.78 0.805 - - - - - - 0.975 - SUZ12, polycomb repressive complex 2 subunit a [Source:ZFIN;Acc:ZDB-GENE-040801-36]
59. ldb1a ENSDARG00000010137 3035 1.756 - - 0.942 - - - - - 0.814 LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
60. nova2 ENSDARG00000017673 7685 1.753 - - 0.885 - - - - 0.868 - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
61. tox ENSDARG00000032317 9126 1.741 - - 0.948 - - - - - 0.793 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
62. atp2a3 ENSDARG00000060978 1408 1.739 - 0.787 - - - - - 0.952 - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 [Source:ZFIN;Acc:ZDB-GENE-060531-103]
63. znf292a ENSDARG00000016763 2253 1.738 - - 0.946 - - - - - 0.792 zinc finger protein 292a [Source:ZFIN;Acc:ZDB-GENE-071004-18]
64. atad5a ENSDARG00000070568 1840 1.731 - - 0.950 - - - - - 0.781 ATPase family, AAA domain containing 5a [Source:ZFIN;Acc:ZDB-GENE-070912-20]
65. si:ch211-114l13.11 si:ch211-114l13.11 4727 1.722 - - 0.877 - - - - 0.845 -
66. rasal2 ENSDARG00000036257 3223 1.722 - - - - - - 0.779 0.943 - RAS protein activator like 2 [Source:ZFIN;Acc:ZDB-GENE-070912-180]
67. ablim1b ENSDARG00000045064, ENSDARG00000111454, ENSDARG00000112629 2672 1.719 - 0.820 0.899 - - - - - - actin binding LIM protein 1b [Source:ZFIN;Acc:ZDB-GENE-050327-91]
68. yy1b ENSDARG00000027978 2669 1.713 - - 0.905 - - 0.808 - - - YY1 transcription factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2127]
69. TNPO2 ENSDARG00000042887 2290 1.711 - - - - - 0.799 - 0.912 - transportin 2 [Source:HGNC Symbol;Acc:HGNC:19998]
70. ptpn9a ENSDARG00000077495 2295 1.709 - - 0.886 - - - 0.823 - - protein tyrosine phosphatase, non-receptor type 9, a [Source:ZFIN;Acc:ZDB-GENE-101027-1]
71. appbp2 ENSDARG00000007566 1961 1.707 - - 0.911 - - - 0.796 - - amyloid beta precursor protein (cytoplasmic tail) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1715]
72. vrk1 ENSDARG00000018006 1759 1.701 - 0.787 0.914 - - - - - - vaccinia related kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2709]
73. fbxo28 ENSDARG00000027159 9602 1.7 - - 0.912 - - - 0.788 - - F-box protein 28 [Source:ZFIN;Acc:ZDB-GENE-030131-4665]
74. scaf4a ENSDARG00000077093 2408 1.7 - - - - - - 0.740 0.960 - SR-related CTD-associated factor 4a [Source:ZFIN;Acc:ZDB-GENE-030131-9003]
75. srsf4 ENSDARG00000105293 9657 1.696 - - 0.862 - - - 0.834 - - serine/arginine-rich splicing factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-591]
76. cpsf3 ENSDARG00000027649 6897 1.694 - - 0.880 - - - 0.814 - - cleavage and polyadenylation specific factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3275]
77. ptbp1a ENSDARG00000019362 6290 1.676 - - 0.944 - - - 0.732 - - polypyrimidine tract binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050522-492]
78. tmem50a ENSDARG00000015757 3244 1.675 - - - - - - 0.741 0.934 - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
79. kansl2 ENSDARG00000056318, ENSDARG00000113311 4702 1.674 - - 0.927 - - - - - 0.747 KAT8 regulatory NSL complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-041010-67]
80. hdac3 ENSDARG00000037514, ENSDARG00000110316 1985 1.674 - - - - - - - 0.958 0.716 histone deacetylase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-847]
81. neo1 neo1 4056 1.671 - - - - - - 0.707 0.964 -
82. eif3ja ENSDARG00000012603 6324 1.669 - - 0.915 - - - - 0.754 - eukaryotic translation initiation factor 3, subunit Ja [Source:ZFIN;Acc:ZDB-GENE-040426-1266]
83. ddx42 ENSDARG00000037928 1659 1.668 - - - - - - - 0.965 0.703 DEAD (Asp-Glu-Ala-Asp) box helicase 42 [Source:ZFIN;Acc:ZDB-GENE-050706-53]
84. cbx3a ENSDARG00000003860 4922 1.667 - - 0.929 - - - - - 0.738 chromobox homolog 3a (HP1 gamma homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-1158]
85. lsm8 ENSDARG00000091656, ENSDARG00000111914 2751 1.664 - - 0.913 - - - - - 0.751 LSM8 homolog, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-070629-3]
86. tbx2a ENSDARG00000018025, ENSDARG00000109541 1183 1.657 - 0.758 0.899 - - - - - - T-box 2a [Source:ZFIN;Acc:ZDB-GENE-990917-4]
87. pbrm1l ENSDARG00000077038, ENSDARG00000116839 1978 1.654 - - 0.913 - - - - - 0.741 polybromo 1, like [Source:ZFIN;Acc:ZDB-GENE-010501-3]
88. psmd8 ENSDARG00000020454 6645 1.653 - - - - - - 0.786 0.867 - proteasome 26S subunit, non-ATPase 8 [Source:ZFIN;Acc:ZDB-GENE-040625-136]
89. mcm5 ENSDARG00000019507 6407 1.648 - - - 0.821 - - - - 0.827 minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
90. lsm7 ENSDARG00000058328 7191 1.647 0.899 - - - - - - - 0.748 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-030131-8284]
91. psmb7 ENSDARG00000037962 11542 1.644 - - 0.874 - - - - - 0.770 proteasome subunit beta 7 [Source:ZFIN;Acc:ZDB-GENE-001208-4]
92. kif22 ENSDARG00000102624 3694 1.643 - - - - - - 0.764 - 0.879 kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
93. anapc13 ENSDARG00000078435 996 1.643 - 0.782 0.861 - - - - - - anaphase promoting complex subunit 13 [Source:ZFIN;Acc:ZDB-GENE-091204-298]
94. nploc4 ENSDARG00000100487 1262 1.641 - 0.747 0.894 - - - - - - NPL4 homolog, ubiquitin recognition factor [Source:ZFIN;Acc:ZDB-GENE-030131-5658]
95. hoxb3a ENSDARG00000029263 5493 1.639 - - 0.910 - - - - 0.729 - homeobox B3a [Source:ZFIN;Acc:ZDB-GENE-990415-104]
96. st13 ENSDARG00000021973 7787 1.637 - - - - - - 0.723 0.914 - ST13, Hsp70 interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-5395]
97. adam10a ENSDARG00000053468 9308 1.637 - - 0.871 - - - 0.766 - - ADAM metallopeptidase domain 10a [Source:ZFIN;Acc:ZDB-GENE-040917-2]
98. pdia5 ENSDARG00000069242 3576 1.636 - - 0.822 - - - 0.814 - - protein disulfide isomerase family A, member 5 [Source:ZFIN;Acc:ZDB-GENE-030521-5]
99. LPHN2 LPHN2 1971 1.635 - - 0.924 - - - - - 0.711
100. HNRNPAB HNRNPAB 22267 1.634 - - - - - - 0.800 - 0.834

There are 1670 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA