Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lamc3

Gene Name Gene ID Reads Annotation
lamc3 ENSDARG00000093572 562 laminin, gamma 3 [Source:ZFIN;Acc:ZDB-GENE-060531-121]










Genes with expression patterns similar to lamc3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lamc3 ENSDARG00000093572 562 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 laminin, gamma 3 [Source:ZFIN;Acc:ZDB-GENE-060531-121]
2. pex7 ENSDARG00000042553 409 1.812 - 0.840 - - - - - - 0.972 peroxisomal biogenesis factor 7 [Source:ZFIN;Acc:ZDB-GENE-050320-105]
3. TMC6 TMC6 773 1.785 - 0.835 - - - - - - 0.950
4. ssh2b ENSDARG00000098955 614 1.755 0.795 - - - - - - - 0.960 slingshot protein phosphatase 2b [Source:ZFIN;Acc:ZDB-GENE-081205-4]
5. mpv17 ENSDARG00000032431 1225 1.75 - - - - - - 0.780 - 0.970 MpV17 mitochondrial inner membrane protein [Source:ZFIN;Acc:ZDB-GENE-040426-1168]
6. cstf1 ENSDARG00000044820 1663 1.733 - 0.801 - - - - - - 0.932 cleavage stimulation factor, 3' pre-RNA, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2958]
7. snap91 ENSDARG00000098809 844 1.724 - 0.782 - - - - - - 0.942 synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
8. LIN9 ENSDARG00000028475 227 1.675 - 0.888 0.787 - - - - - - lin-9 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-030131-1747]
9. sin3ab ENSDARG00000059812 2140 1.674 - - - - - 0.702 - - 0.972 SIN3 transcription regulator family member Ab [Source:ZFIN;Acc:ZDB-GENE-030131-2066]
10. g6pd ENSDARG00000071065, ENSDARG00000111009 1618 1.654 - - 0.715 - - - - - 0.939 glucose-6-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070508-4]
11. morc3a ENSDARG00000056679 648 1.652 - - - - - 0.863 0.789 - - MORC family CW-type zinc finger 3a [Source:ZFIN;Acc:ZDB-GENE-030131-1502]
12. thbs3b ENSDARG00000012060 922 1.59 - 0.881 - - - 0.709 - - - thrombospondin 3b [Source:ZFIN;Acc:ZDB-GENE-060503-84]
13. ADCY3 ADCY3 537 1.586 - 0.806 - - - 0.780 - - -
14. blvrb ENSDARG00000096829 3296 1.576 - - - - - - 0.728 - 0.848 biliverdin reductase B [Source:ZFIN;Acc:ZDB-GENE-030131-1516]
15. TNC ENSDARG00000021948, ENSDARG00000113518 223 1.572 - 0.763 - - - - 0.809 - - tenascin C [Source:ZFIN;Acc:ZDB-GENE-980526-104]
16. zbtb2b ENSDARG00000028086, ENSDARG00000110834 1609 1.558 - - - - - - 0.739 - 0.819 zinc finger and BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2753]
17. WDR60 ENSDARG00000076934 326 1.537 - 0.788 - - - 0.749 - - - WD repeat domain 60 [Source:ZFIN;Acc:ZDB-GENE-140821-1]
18. FAM84B ENSDARG00000032859, ENSDARG00000116831 127 1.533 - 0.830 - - - - - 0.703 - family with sequence similarity 84, member B [Source:ZFIN;Acc:ZDB-GENE-060929-1130]
19. si:dkey-98p3.7 si:dkey-98p3.7 147 1.531 - 0.760 - - - - 0.771 - -
20. rock2b ENSDARG00000004877, ENSDARG00000096433 135 1.529 0.758 - 0.771 - - - - - - rho-associated, coiled-coil containing protein kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060125-2]
21. lpar6a ENSDARG00000062552 1348 1.52 0.745 0.775 - - - - - - - lysophosphatidic acid receptor 6a [Source:ZFIN;Acc:ZDB-GENE-061013-343]
22. RB1CC1 ENSDARG00000076559 2771 1.516 - - - - - 0.717 - - 0.799 RB1-inducible coiled-coil 1 [Source:ZFIN;Acc:ZDB-GENE-130206-1]
23. megf8_2 ENSDARG00000079751, ENSDARG00000103934 32 1.512 - 0.803 - - - - - 0.709 - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
24. PLA2G4C_2 PLA2G4C_2 10 1.509 - 0.803 - - - - 0.706 - -
25. si:dkeyp-67e6.4 si:dkeyp-67e6.4 3680 1.504 - 0.716 - - - - 0.788 - -
26. TOB2 TOB2 254 1.489 - 0.786 0.703 - - - - - -
27. adamts8a ENSDARG00000007709 75 1.475 - 0.750 - - - 0.725 - - - ADAM metallopeptidase with thrombospondin type 1 motif, 8a [Source:ZFIN;Acc:ZDB-GENE-060526-202]
28. exosc1 ENSDARG00000059841 6895 1.474 - - - - - 0.715 - 0.759 - exosome component 1 [Source:ZFIN;Acc:ZDB-GENE-080926-3]
29. unc93b1 ENSDARG00000069114 37 1.445 - 0.739 - - - - 0.706 - - unc-93 homolog B1, TLR signaling regulator [Source:ZFIN;Acc:ZDB-GENE-130424-1]
30. CABZ01049362.1 ENSDARG00000099508 570 1.408 - 0.702 - - - - 0.706 - -
31. ZNF337_22 ZNF337_22 322 0.982 - - - - - - - - 0.982
32. SLC35A2 ENSDARG00000058990 289 0.982 - - - - - - - - 0.982 solute carrier family 35 (UDP-galactose transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030616-62]
33. ing2 ENSDARG00000104907 1336 0.981 - - - - - - - - 0.981 inhibitor of growth family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-147]
34. C19H18orf21 C19H18orf21 338 0.981 - - - - - - - - 0.981
35. si:ch211-135f11.1 166 0.98 - - - - - - - - 0.980 si:ch211-135f11.1, transcript variant X3
36. RNF5 ENSDARG00000075606 1730 0.979 - - - - - - - - 0.979 ring finger protein 5 [Source:HGNC Symbol;Acc:HGNC:10068]
37. ZDHHC3 ZDHHC3 1208 0.978 - - - - - - - - 0.978
38. sox8 sox8 109 0.978 - - - - - - - - 0.978
39. slc6a19b ENSDARG00000056719 140 0.978 - - - - - - - - 0.978 solute carrier family 6 (neutral amino acid transporter), member 19b [Source:ZFIN;Acc:ZDB-GENE-030131-4755]
40. coil ENSDARG00000040070 863 0.978 - - - - - - - - 0.978 coilin p80 [Source:ZFIN;Acc:ZDB-GENE-000330-8]
41. PCDH20 ENSDARG00000036424, ENSDARG00000101910 90 0.977 - - - - - - - - 0.977 protocadherin 20 [Source:NCBI gene;Acc:100007362]
42. mylkb ENSDARG00000004753 95 0.977 - - - - - - - - 0.977 myosin light chain kinase b [Source:ZFIN;Acc:ZDB-GENE-041111-150]
43. zgc:154006 ENSDARG00000061797 152 0.977 - - - - - - - - 0.977 zgc:154006 [Source:ZFIN;Acc:ZDB-GENE-061013-134]
44. slc25a23a ENSDARG00000005690 824 0.977 - - - - - - - - 0.977 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23a [Source:ZFIN;Acc:ZDB-GENE-121214-154]
45. ptpn2a ENSDARG00000016481 493 0.977 - - - - - - - - 0.977 protein tyrosine phosphatase, non-receptor type 2, a [Source:ZFIN;Acc:ZDB-GENE-040426-1196]
46. si:dkeyp-4f2.5 si:dkeyp-4f2.5 232 0.977 - - - - - - - - 0.977
47. prc1a ENSDARG00000100918 1746 0.977 - - - - - - - - 0.977 protein regulator of cytokinesis 1a [Source:ZFIN;Acc:ZDB-GENE-020801-3]
48. ppp6r2b ENSDARG00000069654 323 0.977 - - - - - - - - 0.977 protein phosphatase 6, regulatory subunit 2b [Source:ZFIN;Acc:ZDB-GENE-070705-441]
49. def6b ENSDARG00000044524 99 0.977 - - - - - - - - 0.977 differentially expressed in FDCP 6b homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-110408-59]
50. csrp1a ENSDARG00000006603 5188 0.976 - - - - - - - - 0.976 cysteine and glycine-rich protein 1a [Source:ZFIN;Acc:ZDB-GENE-030909-4]
51. HTR1E 103 0.976 - - - - - - - - 0.976 5-hydroxytryptamine receptor 1E
52. pfkfb2a ENSDARG00000023840 184 0.976 - - - - - - - - 0.976 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2a [Source:ZFIN;Acc:ZDB-GENE-040426-966]
53. fbxl4 ENSDARG00000026941, ENSDARG00000113167 396 0.976 - - - - - - - - 0.976 F-box and leucine-rich repeat protein 4 [Source:ZFIN;Acc:ZDB-GENE-041114-187]
54. LARS2 ENSDARG00000075337 181 0.976 - - - - - - - - 0.976 leucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070928-3]
55. nudt3b ENSDARG00000042123 311 0.976 - - - - - - - - 0.976 nudix (nucleoside diphosphate linked moiety X)-type motif 3b [Source:ZFIN;Acc:ZDB-GENE-041010-128]
56. ints10 ENSDARG00000043031 455 0.975 - - - - - - - - 0.975 integrator complex subunit 10 [Source:ZFIN;Acc:ZDB-GENE-050522-2]
57. mmp9 ENSDARG00000042816 298 0.975 - - - - - - - - 0.975 matrix metallopeptidase 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2132]
58. smim8 ENSDARG00000071040 622 0.975 - - - - - - - - 0.975 small integral membrane protein 8 [Source:ZFIN;Acc:ZDB-GENE-050522-423]
59. THEM4 ENSDARG00000061621 364 0.975 - - - - - - - - 0.975 thioesterase superfamily member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-982]
60. panx1a ENSDARG00000025285 352 0.975 - - - - - - - - 0.975 pannexin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-766]
61. ccdc90b ENSDARG00000044626, ENSDARG00000110887 501 0.975 - - - - - - - - 0.975 coiled-coil domain containing 90B [Source:ZFIN;Acc:ZDB-GENE-040724-162]
62. mir205 2147 0.975 - - - - - - - - 0.975 microRNA 205
63. phactr4a ENSDARG00000015552 1315 0.974 - - - - - - - - 0.974 phosphatase and actin regulator 4a [Source:ZFIN;Acc:ZDB-GENE-051030-69]
64. msxa msxa 263 0.974 - - - - - - - - 0.974
65. zgc:136439 ENSDARG00000009267 720 0.973 - - - - - - - - 0.973 zgc:136439 [Source:ZFIN;Acc:ZDB-GENE-060421-2858]
66. slc12a9 ENSDARG00000060366 293 0.973 - - - - - - - - 0.973 solute carrier family 12, member 9 [Source:ZFIN;Acc:ZDB-GENE-050208-222]
67. PACS1_1 PACS1_1 1264 0.973 - - - - - - - - 0.973
68. TLN2 TLN2 359 0.972 - - - - - - - - 0.972
69. si:dkey-221j11.3 ENSDARG00000093304 1001 0.972 - - - - - - - - 0.972 si:dkey-221j11.3 [Source:ZFIN;Acc:ZDB-GENE-090313-247]
70. LDLR LDLR 838 0.972 - - - - - - - - 0.972
71. CABZ01101003.1 CABZ01101003.1 858 0.972 - - - - - - - - 0.972
72. hsd3b7 ENSDARG00000036966, ENSDARG00000111892, ENSDARG00000114115 797 0.972 - - - - - - - - 0.972 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase [Source:ZFIN;Acc:ZDB-GENE-030131-5673]
73. NSMCE2 ENSDARG00000076379 2133 0.971 - - - - - - - - 0.971 NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase [Source:ZFIN;Acc:ZDB-GENE-081022-128]
74. tacc1 ENSDARG00000073753 1127 0.971 - - - - - - - - 0.971 transforming, acidic coiled-coil containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-090521-5]
75. acads ENSDARG00000030781 1669 0.971 - - - - - - - - 0.971 acyl-CoA dehydrogenase short chain [Source:ZFIN;Acc:ZDB-GENE-040808-64]
76. FBXO33 ENSDARG00000075400 1164 0.97 - - - - - - - - 0.970 F-box protein 33 [Source:ZFIN;Acc:ZDB-GENE-100618-2]
77. HIP1R HIP1R 490 0.97 - - - - - - - - 0.970
78. zgc:113333 ENSDARG00000038242 797 0.97 - - - - - - - - 0.970 zgc:113333 [Source:ZFIN;Acc:ZDB-GENE-050320-57]
79. PGBD4_3 PGBD4_3 861 0.969 - - - - - - - - 0.969
80. gna15.1 ENSDARG00000016364 754 0.969 - - - - - - - - 0.969 guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040801-146]
81. m6pr ENSDARG00000018432 1411 0.968 - - - - - - - - 0.968 mannose-6-phosphate receptor (cation dependent) [Source:ZFIN;Acc:ZDB-GENE-040426-2285]
82. marveld1 ENSDARG00000011724 1025 0.968 - - - - - - - - 0.968 MARVEL domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050208-33]
83. sar1b ENSDARG00000103403 1699 0.968 - - - - - - - - 0.968 secretion associated, Ras related GTPase 1B [Source:ZFIN;Acc:ZDB-GENE-040426-1958]
84. bmp2b ENSDARG00000041430, ENSDARG00000115191 894 0.968 - - - - - - - - 0.968 bone morphogenetic protein 2b [Source:ZFIN;Acc:ZDB-GENE-980526-474]
85. CR847925.1 CR847925.1 835 0.968 - - - - - - - - 0.968
86. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 0.968 - - - - - - - - 0.968 contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
87. zgc:194839 ENSDARG00000078550 4003 0.968 - - - - - - - - 0.968 zgc:194839 [Source:ZFIN;Acc:ZDB-GENE-081022-153]
88. acp1 ENSDARG00000076486 3275 0.967 - - - - - - - - 0.967 acid phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-050327-12]
89. fam65b 557 0.967 - - - - - - - - 0.967 family with sequence similarity 65, member B, transcript variant X4
90. CACUL1 ENSDARG00000021885 691 0.967 - - - - - - - - 0.967 CDK2 associated cullin domain 1 [Source:ZFIN;Acc:ZDB-GENE-170113-2]
91. insig1 ENSDARG00000010658, ENSDARG00000113413 1811 0.967 - - - - - - - - 0.967 insulin induced gene 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6121]
92. narfl ENSDARG00000062216 768 0.967 - - - - - - - - 0.967 nuclear prelamin A recognition factor-like [Source:ZFIN;Acc:ZDB-GENE-070209-119]
93. sh3yl1 ENSDARG00000074393 815 0.967 - - - - - - - - 0.967 SH3 and SYLF domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040128-16]
94. dlg5a ENSDARG00000074059 1834 0.967 - - - - - - - - 0.967 discs, large homolog 5a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-3149]
95. prkra ENSDARG00000076718 606 0.966 - - - - - - - - 0.966 protein kinase, interferon-inducible double stranded RNA dependent activator [Source:ZFIN;Acc:ZDB-GENE-050309-206]
96. twistnb ENSDARG00000024416 1077 0.965 - - - - - - - - 0.965 TWIST neighbor [Source:ZFIN;Acc:ZDB-GENE-041007-3]
97. si:ch211-51c14.1 ENSDARG00000054645, ENSDARG00000110953 2434 0.965 - - - - - - - - 0.965 si:ch211-51c14.1 [Source:ZFIN;Acc:ZDB-GENE-120215-48]
98. MON1B_1 MON1B_1 697 0.965 - - - - - - - - 0.965
99. C25H11orf24 C25H11orf24 1011 0.965 - - - - - - - - 0.965
100. nol7 ENSDARG00000075795 1559 0.964 - - - - - - - - 0.964 nucleolar protein 7 [Source:ZFIN;Acc:ZDB-GENE-030131-9100]

There are 1115 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA