Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for krt18

Gene Name Gene ID Reads Annotation
krt18 ENSDARG00000018404, ENSDARG00000109528 43707 keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]










Genes with expression patterns similar to krt18

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. krt18 ENSDARG00000018404, ENSDARG00000109528 43707 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
2. hoxc13a ENSDARG00000070353 4815 2.221 - 0.754 - 0.714 - - - 0.753 - homeobox C13a [Source:ZFIN;Acc:ZDB-GENE-000822-4]
3. rps12 ENSDARG00000036875, ENSDARG00000115157 92636 1.74 - 0.814 - - - - - - 0.926 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
4. cmn ENSDARG00000055527 14039 1.707 0.733 - - - - - 0.974 - - calymmin [Source:ZFIN;Acc:ZDB-GENE-000208-9]
5. loxl3b ENSDARG00000039563 1657 1.687 - - - - - 0.721 0.966 - - lysyl oxidase-like 3b [Source:ZFIN;Acc:ZDB-GENE-030131-8210]
6. lect1 7551 1.678 - - - - - 0.706 - - 0.972 leukocyte cell derived chemotaxin 1, transcript variant X1
7. ptmaa ENSDARG00000021113, ENSDARG00000110479 42345 1.619 - 0.735 - - - - - - 0.884 prothymosin alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-7647]
8. rps26l ENSDARG00000030408 146322 1.582 - 0.821 - - - - - - 0.761 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
9. CABZ01044297.1 CABZ01044297.1 2015 1.573 0.764 - - - - 0.809 - - -
10. PAQR4 PAQR4 2150 1.557 0.751 - - - - 0.806 - - -
11. zgc:113232 ENSDARG00000040118, ENSDARG00000116977 5865 1.542 0.733 - - - - 0.809 - - - zgc:113232 [Source:ZFIN;Acc:ZDB-GENE-050327-86]
12. si:dkeyp-12a9.5 3058 1.542 0.753 - - - - 0.789 - - - si:dkeyp-12a9.5
13. epyc ENSDARG00000056950 7783 1.537 0.755 - - - - 0.782 - - - epiphycan [Source:ZFIN;Acc:ZDB-GENE-041008-9]
14. pi15a ENSDARG00000045378 2361 1.535 - - - 0.751 - 0.784 - - - peptidase inhibitor 15a [Source:ZFIN;Acc:ZDB-GENE-040724-135]
15. col2a1a ENSDARG00000069093, ENSDARG00000111202 50276 1.532 0.743 - - - - 0.789 - - - collagen, type II, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-980526-192]
16. plod1a ENSDARG00000059746 3364 1.513 - 0.755 - - - 0.758 - - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3165]
17. ntla ntla 926 1.51 0.733 - - - - 0.777 - - -
18. col9a3 ENSDARG00000037845 6564 1.508 0.709 - - - - 0.799 - - - collagen, type IX, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9799]
19. CABZ01079764.1 CABZ01079764.1 12103 1.499 0.710 - - - - 0.789 - - -
20. ntd5 ENSDARG00000040944 4988 1.497 0.707 - - - - 0.790 - - - ntl-dependent gene 5 [Source:ZFIN;Acc:ZDB-GENE-031030-7]
21. plod2 ENSDARG00000011821 1656 1.493 0.728 - - - - 0.765 - - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-070326-1]
22. si:dkeyp-118a3.2 ENSDARG00000086957 2106 1.483 0.756 - - - - 0.727 - - - si:dkeyp-118a3.2 [Source:ZFIN;Acc:ZDB-GENE-060810-149]
23. fam46bb 601 1.473 - - - 0.702 - 0.771 - - - family with sequence similarity 46, member Bb
24. susd5 ENSDARG00000088277 439 1.449 0.702 - - - - 0.747 - - - sushi domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-120215-196]
25. pgam2 ENSDARG00000057571 23387 0.982 - - - - - - 0.982 - - phosphoglycerate mutase 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040116-6]
26. myoz1a ENSDARG00000056209, ENSDARG00000115885 3668 0.979 - - - - - - 0.979 - - myozenin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1875]
27. ndufs2 ENSDARG00000007526 6516 0.976 - - - - - - 0.976 - - NADH:ubiquinone oxidoreductase core subunit S2 [Source:ZFIN;Acc:ZDB-GENE-050522-273]
28. NDUFB1 ENSDARG00000087456 8270 0.976 - - - - - - 0.976 - - NADH:ubiquinone oxidoreductase subunit B1 [Source:HGNC Symbol;Acc:HGNC:7695]
29. tpm4a ENSDARG00000023963 10932 0.974 - - - - - - 0.974 - - tropomyosin 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2185]
30. hint1 ENSDARG00000103824, ENSDARG00000110789 8302 0.973 - - - - - - 0.973 - - histidine triad nucleotide binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040927-8]
31. rpl17 ENSDARG00000057556 60281 0.973 - - - - - - - - 0.973 ribosomal protein L17 [Source:ZFIN;Acc:ZDB-GENE-030131-8585]
32. mtch2 ENSDARG00000019732 3948 0.97 - - - - - - 0.970 - - mitochondrial carrier homolog 2 [Source:ZFIN;Acc:ZDB-GENE-991008-9]
33. akap1b ENSDARG00000006062 4214 0.969 - - - - - - 0.969 - - A kinase (PRKA) anchor protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-6844]
34. ola1 ENSDARG00000044565 22424 0.969 - - - - - - 0.969 - - Obg-like ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5063]
35. psmb6 ENSDARG00000002240 8015 0.968 - - - - - - 0.968 - - proteasome subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216]
36. map2k6 ENSDARG00000099184 8741 0.968 - - - - - - 0.968 - - mitogen-activated protein kinase kinase 6 [Source:ZFIN;Acc:ZDB-GENE-010202-3]
37. mef2ca ENSDARG00000029764 18547 0.967 - - - - - - 0.967 - - myocyte enhancer factor 2ca [Source:ZFIN;Acc:ZDB-GENE-980526-253]
38. ctnnb1 ENSDARG00000014571 12004 0.967 - - - - - - - - 0.967 catenin (cadherin-associated protein), beta 1 [Source:ZFIN;Acc:ZDB-GENE-980526-362]
39. samm50 ENSDARG00000045814 4511 0.967 - - - - - - 0.967 - - SAMM50 sorting and assembly machinery component [Source:ZFIN;Acc:ZDB-GENE-040426-806]
40. NDUFB2 ENSDARG00000045490 9141 0.966 - - - - - - - - 0.966 NADH:ubiquinone oxidoreductase subunit B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1762]
41. st3gal3a ENSDARG00000015374 2360 0.966 - - - - - - 0.966 - - ST3 beta-galactoside alpha-2,3-sialyltransferase 3a [Source:ZFIN;Acc:ZDB-GENE-040426-1322]
42. osgn1 ENSDARG00000052279 5607 0.966 - - - - - - - - 0.966 oxidative stress induced growth inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-864]
43. p4ha1b ENSDARG00000071082, ENSDARG00000112774 3198 0.966 - - - - - - 0.966 - - prolyl 4-hydroxylase, alpha polypeptide I b [Source:ZFIN;Acc:ZDB-GENE-030131-4089]
44. wdr33 ENSDARG00000018272 4076 0.966 - - - - - - 0.966 - - WD repeat domain 33 [Source:ZFIN;Acc:ZDB-GENE-040924-3]
45. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 0.965 - - - - - - - - 0.965 serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
46. fus ENSDARG00000037968, ENSDARG00000113554, ENSDARG00000114284 4319 0.965 - - - - - - - - 0.965 FUS RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-040426-1010]
47. slc40a1 ENSDARG00000000241 4882 0.965 - - - - - - - - 0.965 solute carrier family 40 (iron-regulated transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-000511-8]
48. fam32al fam32al 5716 0.965 - - - - - - 0.965 - -
49. C5H8orf4 C5H8orf4 2740 0.965 - - - - - - 0.965 - -
50. ier5l ENSDARG00000054906, ENSDARG00000110793, ENSDARG00000114072 4216 0.965 - - - - - - 0.965 - - immediate early response 5-like [Source:ZFIN;Acc:ZDB-GENE-030131-5134]
51. ccdc124 ENSDARG00000043502 2420 0.965 - - - - - - 0.965 - - coiled-coil domain containing 124 [Source:ZFIN;Acc:ZDB-GENE-040426-1483]
52. zgc:101000 zgc:101000 9041 0.964 - - - - - - - - 0.964
53. DST ENSDARG00000101858 4395 0.964 - - - - - - - - 0.964 dystonin [Source:HGNC Symbol;Acc:HGNC:1090]
54. NRD1 NRD1 3486 0.964 - - - - - - 0.964 - -
55. BX000999.2 BX000999.2 2353 0.964 - - - - - - - - 0.964
56. mapk6 ENSDARG00000032103 6422 0.964 - - - - - - - - 0.964 mitogen-activated protein kinase 6 [Source:ZFIN;Acc:ZDB-GENE-050420-7]
57. irf5 ENSDARG00000045681 2594 0.964 - - - - - - - - 0.964 interferon regulatory factor 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2587]
58. KLF16 KLF16 3773 0.964 - - - - - - - - 0.964
59. vbp1 ENSDARG00000030241 10619 0.964 - - - - - - - - 0.964 von Hippel-Lindau binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-494]
60. gpd1a ENSDARG00000043701 1105 0.964 - - - - - - 0.964 - - glycerol-3-phosphate dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-050417-209]
61. pip5k1bb ENSDARG00000006508 2812 0.964 - - - - - - - - 0.964 phosphatidylinositol-4-phosphate 5-kinase, type I, beta b [Source:ZFIN;Acc:ZDB-GENE-040912-141]
62. pah ENSDARG00000020143 1551 0.964 - - - - - - 0.964 - - phenylalanine hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031006-2]
63. nup133 ENSDARG00000010078 2373 0.963 - - - - - - 0.963 - - nucleoporin 133 [Source:ZFIN;Acc:ZDB-GENE-040426-2941]
64. cct2 ENSDARG00000087206, ENSDARG00000104674 19049 0.963 - - - - - - - - 0.963 chaperonin containing TCP1, subunit 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-020419-6]
65. stag2a ENSDARG00000011783 1588 0.963 - - - - - - 0.963 - - stromal antigen 2a [Source:ZFIN;Acc:ZDB-GENE-030131-3432]
66. gtf2f1 ENSDARG00000032129 3041 0.963 - - - - - - 0.963 - - general transcription factor IIF, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4557]
67. zgc:110329 ENSDARG00000035532, ENSDARG00000110423 2229 0.963 - - - - - - 0.963 - - zgc:110329 [Source:ZFIN;Acc:ZDB-GENE-050417-334]
68. yars ENSDARG00000035913, ENSDARG00000113430 2043 0.963 - - - - - - 0.963 - - tyrosyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030425-2]
69. ggcx ENSDARG00000067805 3812 0.963 - - - - - - 0.963 - - gamma-glutamyl carboxylase [Source:ZFIN;Acc:ZDB-GENE-030826-27]
70. phf23b ENSDARG00000036305 1073 0.963 - - - - - - 0.963 - - PHD finger protein 23b [Source:ZFIN;Acc:ZDB-GENE-030131-5895]
71. puf60b ENSDARG00000001241 13827 0.963 - - - - - - 0.963 - - poly-U binding splicing factor b [Source:ZFIN;Acc:ZDB-GENE-040625-116]
72. slc25a48 ENSDARG00000021250 1057 0.963 - - - - - - 0.963 - - solute carrier family 25, member 48 [Source:ZFIN;Acc:ZDB-GENE-040718-60]
73. rab32a ENSDARG00000029036 2157 0.963 - - - - - - 0.963 - - RAB32a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031006-10]
74. ctns ENSDARG00000008890 887 0.962 - - - - - - 0.962 - - cystinosin, lysosomal cystine transporter [Source:ZFIN;Acc:ZDB-GENE-050522-352]
75. tbc1d16 ENSDARG00000036994 948 0.962 - - - - - - 0.962 - - TBC1 domain family, member 16 [Source:ZFIN;Acc:ZDB-GENE-041010-179]
76. TATDN3 ENSDARG00000044072 914 0.962 - - - - - - 0.962 - - TatD DNase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:27010]
77. zgc:65895 ENSDARG00000034086 1258 0.962 - - - - - - 0.962 - - zgc:65895 [Source:ZFIN;Acc:ZDB-GENE-040426-1466]
78. eif5a2 ENSDARG00000056186 43804 0.962 - - - - - - - - 0.962 eukaryotic translation initiation factor 5A2 [Source:ZFIN;Acc:ZDB-GENE-040426-2405]
79. nf2a ENSDARG00000020204 740 0.962 - - - - - - 0.962 - - neurofibromin 2a (merlin) [Source:ZFIN;Acc:ZDB-GENE-080722-7]
80. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 0.962 - - - - - - - - 0.962 one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
81. lmf2b ENSDARG00000025859, ENSDARG00000115591 2671 0.962 - - - - - - 0.962 - - lipase maturation factor 2b [Source:ZFIN;Acc:ZDB-GENE-070206-11]
82. dnaja1l dnaja1l 1536 0.962 - - - - - - 0.962 - -
83. cnnm2a ENSDARG00000061195 764 0.962 - - - - - - 0.962 - - cyclin and CBS domain divalent metal cation transport mediator 2a [Source:ZFIN;Acc:ZDB-GENE-050208-36]
84. sncb ENSDARG00000104945 8197 0.961 - - - - - - 0.961 - - synuclein, beta [Source:ZFIN;Acc:ZDB-GENE-040426-1615]
85. bloc1s6 ENSDARG00000042933 2978 0.961 - - - - - - 0.961 - - biogenesis of lysosomal organelles complex-1, subunit 6, pallidin [Source:ZFIN;Acc:ZDB-GENE-070112-1862]
86. inab ENSDARG00000053248 3239 0.961 - - - - - - 0.961 - - internexin neuronal intermediate filament protein, alpha b [Source:ZFIN;Acc:ZDB-GENE-990415-83]
87. p4hb ENSDARG00000105116, ENSDARG00000116847 6885 0.96 - - - - - - 0.960 - - prolyl 4-hydroxylase, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-080610-1]
88. slc13a2 ENSDARG00000053853 1164 0.96 - - - - - - 0.960 - - solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2389]
89. trappc1 ENSDARG00000039005 6990 0.96 - - - - - - 0.960 - - trafficking protein particle complex 1 [Source:ZFIN;Acc:ZDB-GENE-040718-242]
90. ddx5 ENSDARG00000038068 35302 0.96 - - - - - - - - 0.960 DEAD (Asp-Glu-Ala-Asp) box helicase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-925]
91. scel ENSDARG00000034677, ENSDARG00000110476, ENSDARG00000111222, ENSDARG00000116782 3270 0.958 - - - - - - 0.958 - - sciellin [Source:ZFIN;Acc:ZDB-GENE-030616-15]
92. BX511252.1 BX511252.1 59309 0.957 - - - - - - - - 0.957
93. caspb ENSDARG00000052039 4329 0.956 - - - - - - 0.956 - - caspase b [Source:ZFIN;Acc:ZDB-GENE-020812-1]
94. ppib ENSDARG00000092798 21969 0.956 - - - - - - - - 0.956 peptidylprolyl isomerase B (cyclophilin B) [Source:ZFIN;Acc:ZDB-GENE-040426-1955]
95. nop56 ENSDARG00000012820 15231 0.955 - - - - - - 0.955 - - NOP56 ribonucleoprotein homolog [Source:ZFIN;Acc:ZDB-GENE-040109-1]
96. ube2d1b ENSDARG00000038576 5971 0.955 - - - - - - 0.955 - - ubiquitin-conjugating enzyme E2D 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2735]
97. etf1 etf1 12861 0.954 - - - - - - 0.954 - -
98. sox9b ENSDARG00000043923 5375 0.952 - - - - - - 0.952 - - SRY (sex determining region Y)-box 9b [Source:ZFIN;Acc:ZDB-GENE-001103-2]
99. tpd52l2a ENSDARG00000027154 4359 0.95 - - - - - - 0.950 - - tumor protein D52-like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7047]
100. LGALS3 LGALS3 8665 0.95 - - - - - - 0.950 - -

There are 223 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA