Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for krt1-19d

Gene Name Gene ID Reads Annotation
krt1-19d ENSDARG00000023082 902 keratin, type 1, gene 19d [Source:ZFIN;Acc:ZDB-GENE-060316-1]










Genes with expression patterns similar to krt1-19d

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. krt1-19d ENSDARG00000023082 902 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 keratin, type 1, gene 19d [Source:ZFIN;Acc:ZDB-GENE-060316-1]
2. lrrtm1 ENSDARG00000052713 1041 1.957 - - - 0.993 - - - 0.964 - leucine rich repeat transmembrane neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-050506-80]
3. mrpl11 ENSDARG00000013075 2927 1.948 - - - 0.984 - - - 0.964 - mitochondrial ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040718-294]
4. vps36 ENSDARG00000057021 636 1.928 - - - - - 0.944 - 0.984 - vacuolar protein sorting 36 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-7753]
5. gnl3l ENSDARG00000020595, ENSDARG00000109309 3582 1.916 - - - - - 0.945 - 0.971 - guanine nucleotide binding protein-like 3 (nucleolar)-like [Source:ZFIN;Acc:ZDB-GENE-040723-1]
6. nr1d2b ENSDARG00000009594 1144 1.914 - - - 0.993 - 0.921 - - - nuclear receptor subfamily 1, group D, member 2b [Source:ZFIN;Acc:ZDB-GENE-990415-244]
7. rab5c ENSDARG00000026712 4733 1.854 - - - 0.986 - - - 0.868 - RAB5C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031118-30]
8. clk4b ENSDARG00000005908 915 1.851 - - - - - 0.901 - 0.950 - CDC-like kinase 4b [Source:ZFIN;Acc:ZDB-GENE-050227-19]
9. psmb6 ENSDARG00000002240 8015 1.833 - - - - - 0.919 - 0.914 - proteasome subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216]
10. myeov2 3351 1.827 - - - 0.970 - 0.857 - - - myeloma overexpressed 2
11. si:ch211-11k18.4 ENSDARG00000087869 3298 1.825 - - - 0.991 - 0.834 - - - si:ch211-11k18.4 [Source:ZFIN;Acc:ZDB-GENE-070912-22]
12. cks2 ENSDARG00000071410, ENSDARG00000116198 966 1.812 - - - - - - 0.824 0.988 - CDC28 protein kinase regulatory subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050208-508]
13. arpp19b ENSDARG00000039880 4823 1.802 - - - 0.970 - - - 0.832 - cAMP-regulated phosphoprotein 19b [Source:ZFIN;Acc:ZDB-GENE-040426-930]
14. cdc34b ENSDARG00000012627 3879 1.797 - - - 0.976 - 0.821 - - - cell division cycle 34 homolog (S. cerevisiae) b [Source:ZFIN;Acc:ZDB-GENE-040718-439]
15. gfod2 ENSDARG00000061145 263 1.789 - 0.821 - - - - - 0.968 - glucose-fructose oxidoreductase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-061103-64]
16. arpc4 ENSDARG00000054063 6150 1.788 - - - 0.955 - 0.833 - - - actin related protein 2/3 complex, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-010724-9]
17. mxd3 ENSDARG00000098350 3040 1.758 - - - 0.985 - 0.773 - - - MAX dimerization protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1588]
18. ddx23 ENSDARG00000021945, ENSDARG00000116153 2265 1.752 - - - - - 0.829 - 0.923 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Source:ZFIN;Acc:ZDB-GENE-030131-6215]
19. mllt3 ENSDARG00000006754 985 1.737 - - - - - - 0.759 0.978 - MLLT3, super elongation complex subunit [Source:ZFIN;Acc:ZDB-GENE-050417-356]
20. gpr143 ENSDARG00000034572 559 1.727 - - - - - 0.906 0.821 - - G protein-coupled receptor 143 [Source:ZFIN;Acc:ZDB-GENE-040426-1476]
21. si:ch73-52f15.5 ENSDARG00000095400 1368 1.726 - - - 0.992 - 0.734 - - - si:ch73-52f15.5 [Source:ZFIN;Acc:ZDB-GENE-091204-341]
22. ankrd6b ENSDARG00000029370 429 1.709 - 0.750 - - - 0.959 - - - ankyrin repeat domain 6b [Source:ZFIN;Acc:ZDB-GENE-030916-4]
23. ppig ENSDARG00000044431 3427 1.709 - - - - - 0.811 - 0.898 - peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
24. ptrhd1 ENSDARG00000016122 2705 1.709 - - - - - 0.757 - 0.952 - peptidyl-tRNA hydrolase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081110-2]
25. dbnlb ENSDARG00000016016 1412 1.702 - - - - - 0.782 - 0.920 - drebrin-like b [Source:ZFIN;Acc:ZDB-GENE-050522-293]
26. tab3 ENSDARG00000062063 525 1.7 - 0.812 - - - 0.888 - - - TGF-beta activated kinase 1 (MAP3K7) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-060503-408]
27. rhogd ENSDARG00000030608, ENSDARG00000112157 599 1.698 - - - - - 0.958 0.740 - - ras homolog gene family, member Gd [Source:ZFIN;Acc:ZDB-GENE-040426-1504]
28. DUOXA1 DUOXA1 278 1.689 - - - - - 0.926 0.763 - -
29. dre-mir-429b ENSDARG00000082968 212 1.689 - - - - - 0.966 0.723 - - dre-mir-429b [Source:miRBase;Acc:MI0010836]
30. CABZ01055343.2 CABZ01055343.2 10312 1.687 - - - 0.980 - 0.707 - - -
31. cldn7b ENSDARG00000014047, ENSDARG00000114912 2960 1.666 - - - - - 0.932 0.734 - - claudin 7b [Source:ZFIN;Acc:ZDB-GENE-001103-5]
32. si:dkey-169i5.4 ENSDARG00000077862 511 1.659 - - - - - 0.887 0.772 - - si:dkey-169i5.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8695]
33. ppapdc1b ppapdc1b 2866 1.644 - - - - - 0.814 - 0.830 -
34. ppil1 ENSDARG00000015422 1353 1.641 - - - - - 0.911 0.730 - - peptidylprolyl isomerase (cyclophilin)-like 1 [Source:ZFIN;Acc:ZDB-GENE-051009-1]
35. PTS ENSDARG00000045269 2185 1.626 - - - - - 0.713 - 0.913 - 6-pyruvoyltetrahydropterin synthase [Source:ZFIN;Acc:ZDB-GENE-070615-3]
36. rnf145b ENSDARG00000032373 601 1.608 - 0.855 - - - 0.753 - - - ring finger protein 145b [Source:ZFIN;Acc:ZDB-GENE-030131-5264]
37. tjp3 ENSDARG00000002909 1978 1.59 - - - - - 0.804 0.786 - - tight junction protein 3 [Source:ZFIN;Acc:ZDB-GENE-030828-10]
38. tet3 ENSDARG00000062646 6672 1.587 - - - - - 0.756 - 0.831 - tet methylcytosine dioxygenase 3 [Source:ZFIN;Acc:ZDB-GENE-060526-109]
39. fkbp2 ENSDARG00000044540 1615 1.582 - - - - - 0.854 - 0.728 - FK506 binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040912-126]
40. RAPGEFL1 ENSDARG00000079912 1074 1.566 - - - - - 0.773 0.793 - - Rap guanine nucleotide exchange factor (GEF)-like 1 [Source:ZFIN;Acc:ZDB-GENE-131121-404]
41. vta1 ENSDARG00000013732 6072 1.552 - - - - - 0.742 - 0.810 - vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]
42. zgc:174888 ENSDARG00000077176, ENSDARG00000114997 166 1.521 - 0.776 - - - - 0.745 - - zgc:174888 [Source:ZFIN;Acc:ZDB-GENE-030328-33]
43. bsdc1 ENSDARG00000052623, ENSDARG00000116408 1987 1.508 0.747 - - - - - 0.761 - - BSD domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040905-1]
44. dusp7 ENSDARG00000101413 1307 1.495 - - - - - 0.752 0.743 - - dual specificity phosphatase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5457]
45. marveld3 ENSDARG00000099654 113 1.488 - 0.786 - - - - 0.702 - - MARVEL domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1641]
46. GPSM3 GPSM3 257 1.424 - 0.715 - - - - 0.709 - -
47. si:busm1-266f07.2 ENSDARG00000031745 19 1 - 1.000 - - - - - - - si:busm1-266f07.2 [Source:ZFIN;Acc:ZDB-GENE-030616-436]
48. TBC1D10C ENSDARG00000037408 18 1 - 1.000 - - - - - - - TBC1 domain family, member 10C [Source:ZFIN;Acc:ZDB-GENE-130125-1]
49. ndrg1b ENSDARG00000010420 116 1 - 1.000 - - - - - - - N-myc downstream regulated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1648]
50. abhd12 ENSDARG00000071004 47 1 - 1.000 - - - - - - - abhydrolase domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-060929-268]
51. dnaaf1 ENSDARG00000012030 58 1 - 1.000 - - - - - - - dynein, axonemal, assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-031114-4]
52. OCRL ENSDARG00000078106, ENSDARG00000115715, ENSDARG00000117019 317 0.997 - - - - - - - 0.997 - oculocerebrorenal syndrome of Lowe [Source:ZFIN;Acc:ZDB-GENE-061110-61]
53. zic4 ENSDARG00000031307 1228 0.996 - - - 0.996 - - - - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
54. sept5a ENSDARG00000013843 1206 0.995 - - - 0.995 - - - - - septin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7868]
55. phf6 ENSDARG00000004046, ENSDARG00000115639 925 0.995 - - - 0.995 - - - - - PHD finger protein 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5278]
56. fam122b ENSDARG00000036500, ENSDARG00000116582 1408 0.994 - - - 0.994 - - - - - family with sequence similarity 122B [Source:ZFIN;Acc:ZDB-GENE-040801-204]
57. tsen2 ENSDARG00000091851 1467 0.994 - - - 0.994 - - - - - TSEN2 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-060929-918]
58. fam102bb ENSDARG00000002333 1483 0.994 - - - 0.994 - - - - - family with sequence similarity 102, member B, b [Source:ZFIN;Acc:ZDB-GENE-041014-330]
59. gpatch1 ENSDARG00000033418 1349 0.994 - - - 0.994 - - - - - G patch domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040914-65]
60. tceb1a 969 0.994 - - - - - - - 0.994 - transcription elongation factor B (SIII), polypeptide 1a, transcript variant X4
61. unc5b ENSDARG00000033327 3432 0.994 - - - 0.994 - - - - - unc-5 netrin receptor B [Source:ZFIN;Acc:ZDB-GENE-041213-1]
62. si:ch211-155e24.3 ENSDARG00000105127 972 0.994 - - - 0.994 - - - - - si:ch211-155e24.3 [Source:ZFIN;Acc:ZDB-GENE-070912-116]
63. ccdc102a ENSDARG00000003872 791 0.994 - - - 0.994 - - - - - coiled-coil domain containing 102A [Source:ZFIN;Acc:ZDB-GENE-030131-4044]
64. fgfr2 ENSDARG00000058115 6743 0.994 - - - 0.994 - - - - - fibroblast growth factor receptor 2 [Source:ZFIN;Acc:ZDB-GENE-030323-1]
65. SNORA2 SNORA2 486 0.993 - - - 0.993 - - - - -
66. AL954698.1 ENSDARG00000098202 377 0.993 - - - 0.993 - - - - -
67. WNK2 ENSDARG00000104989 429 0.993 - - - 0.993 - - - - - WNK lysine deficient protein kinase 2 [Source:ZFIN;Acc:ZDB-GENE-160114-3]
68. zgc:173702 ENSDARG00000110229 411 0.993 - - - 0.993 - - - - - zgc:173702 [Source:ZFIN;Acc:ZDB-GENE-080208-3]
69. nop2 ENSDARG00000043304 2511 0.993 - - - 0.993 - - - - - NOP2 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-050309-7]
70. polr1a ENSDARG00000098375 1224 0.993 - - - 0.993 - - - - - RNA polymerase I subunit A [Source:ZFIN;Acc:ZDB-GENE-030131-5286]
71. snx18a ENSDARG00000067713, ENSDARG00000109647 765 0.993 - - - 0.993 - - - - - sorting nexin 18a [Source:ZFIN;Acc:ZDB-GENE-070705-339]
72. strap ENSDARG00000007405 6426 0.993 - - - 0.993 - - - - - serine/threonine kinase receptor associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-1110]
73. si:dkeyp-82h4.2 si:dkeyp-82h4.2 494 0.993 - - - 0.993 - - - - -
74. polr3e ENSDARG00000037358 1864 0.993 - - - 0.993 - - - - - polymerase (RNA) III (DNA directed) polypeptide E [Source:ZFIN;Acc:ZDB-GENE-030131-8462]
75. si:dkey-156k2.6 si:dkey-156k2.6 848 0.993 - - - 0.993 - - - - -
76. rhoua ENSDARG00000019709 1506 0.993 - - - 0.993 - - - - - ras homolog family member Ua [Source:ZFIN;Acc:ZDB-GENE-040618-3]
77. dnttip2 ENSDARG00000057648 2381 0.993 - - - 0.993 - - - - - deoxynucleotidyltransferase, terminal, interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080513-5]
78. nol12 ENSDARG00000038027 2288 0.993 - - - 0.993 - - - - - nucleolar protein 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1035]
79. tgfb1b ENSDARG00000034895 608 0.993 - - - 0.993 - - - - - transforming growth factor, beta 1b [Source:ZFIN;Acc:ZDB-GENE-091028-1]
80. tox4 tox4 1671 0.993 - - - 0.993 - - - - -
81. prkrip1 ENSDARG00000033126, ENSDARG00000113803 1634 0.993 - - - 0.993 - - - - - PRKR interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-111011-2]
82. PPP1R8 PPP1R8 1897 0.993 - - - 0.993 - - - - -
83. cpsf5 cpsf5 1841 0.993 - - - 0.993 - - - - -
84. BX323459.1 ENSDARG00000109508 1476 0.992 - - - 0.992 - - - - -
85. sirt6 ENSDARG00000102963 766 0.992 - - - 0.992 - - - - - sirtuin 6 [Source:ZFIN;Acc:ZDB-GENE-031007-2]
86. mcrs1 ENSDARG00000020840 3232 0.992 - - - 0.992 - - - - - microspherule protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2434]
87. nelfb ENSDARG00000035505 1337 0.992 - - - 0.992 - - - - - negative elongation factor complex member B [Source:ZFIN;Acc:ZDB-GENE-040426-765]
88. rb1 ENSDARG00000006782 1445 0.992 - - - 0.992 - - - - - retinoblastoma 1 [Source:ZFIN;Acc:ZDB-GENE-040428-1]
89. sh3gl3a ENSDARG00000013360 3602 0.992 - - - 0.992 - - - - - SH3-domain GRB2-like 3a [Source:ZFIN;Acc:ZDB-GENE-070112-242]
90. tmem55a 1331 0.991 - - - - - - - 0.991 - transmembrane protein 55A
91. PAPD5 2090 0.991 - - - 0.991 - - - - - PAP associated domain containing 5, transcript variant X1
92. parn ENSDARG00000102634 2049 0.991 - - - 0.991 - - - - - poly(A)-specific ribonuclease (deadenylation nuclease) [Source:ZFIN;Acc:ZDB-GENE-040426-880]
93. brd7 ENSDARG00000008380 3654 0.991 - - - 0.991 - - - - - bromodomain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2687]
94. chga ENSDARG00000008829 1086 0.991 - - - 0.991 - - - - - chromogranin A [Source:ZFIN;Acc:ZDB-GENE-041010-161]
95. insig1 ENSDARG00000010658, ENSDARG00000113413 1811 0.991 - - - 0.991 - - - - - insulin induced gene 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6121]
96. SLC7A5 ENSDARG00000099265, ENSDARG00000115845 2319 0.991 - - - 0.991 - - - - - solute carrier family 7 (amino acid transporter light chain, L system), member 5 [Source:ZFIN;Acc:ZDB-GENE-080818-4]
97. tcf3b ENSDARG00000099999, ENSDARG00000112646 3589 0.991 - - - 0.991 - - - - - transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-051113-64]
98. si:dkey-117p18.2 si:dkey-117p18.2 104 0.99 - - - - - - - 0.990 -
99. kdm6bb ENSDARG00000056929 4807 0.99 - - - 0.990 - - - - - lysine (K)-specific demethylase 6B, b [Source:ZFIN;Acc:ZDB-GENE-040724-166]
100. slc29a4 ENSDARG00000059690 478 0.99 - - - - - - - 0.990 - solute carrier family 29 (equilibrative nucleoside transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1932]

There are 1449 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA