Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for kpna1

Gene Name Gene ID Reads Annotation
kpna1 ENSDARG00000016360 1275 karyopherin alpha 1 (importin alpha 5) [Source:ZFIN;Acc:ZDB-GENE-091116-39]










Genes with expression patterns similar to kpna1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. kpna1 ENSDARG00000016360 1275 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 karyopherin alpha 1 (importin alpha 5) [Source:ZFIN;Acc:ZDB-GENE-091116-39]
2. pisd ENSDARG00000052462, ENSDARG00000110128 463 1.657 - - - 0.842 - - 0.815 - - phosphatidylserine decarboxylase [Source:ZFIN;Acc:ZDB-GENE-061215-46]
3. abhd14a ENSDARG00000058367 546 1.635 0.818 0.817 - - - - - - - abhydrolase domain containing 14A [Source:ZFIN;Acc:ZDB-GENE-040426-2428]
4. fra10ac1 ENSDARG00000102615 425 1.63 0.831 - - - - - 0.799 - - FRA10A associated CGG repeat 1 [Source:ZFIN;Acc:ZDB-GENE-041010-95]
5. panx1a ENSDARG00000025285 352 1.629 - - - 0.805 - - 0.824 - - pannexin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-766]
6. ubl3b ENSDARG00000021556 1210 1.593 0.774 - - - - - 0.819 - - ubiquitin-like 3b [Source:ZFIN;Acc:ZDB-GENE-040630-4]
7. kctd10 ENSDARG00000017115 1659 1.572 - 0.733 - - - - 0.839 - - potassium channel tetramerization domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-2843]
8. bbs7 ENSDARG00000059911 165 1.541 0.782 - - - - - 0.759 - - Bardet-Biedl syndrome 7 [Source:ZFIN;Acc:ZDB-GENE-030219-90]
9. si:ch73-30n17.4 si:ch73-30n17.4 650 1.518 0.787 0.731 - - - - - - -
10. hoxa9a ENSDARG00000105013 1509 1.513 - 0.808 - - - - 0.705 - - homeobox A9a [Source:ZFIN;Acc:ZDB-GENE-000823-1]
11. rangap1b ENSDARG00000056059, ENSDARG00000115814 1109 1.511 0.725 0.786 - - - - - - - Ran GTPase activating protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1921]
12. snrpb2 ENSDARG00000039424 1597 1.469 - 0.704 - - - 0.765 - - - small nuclear ribonucleoprotein polypeptide B2 [Source:ZFIN;Acc:ZDB-GENE-060616-2]
13. zgc:100920 ENSDARG00000042961, ENSDARG00000112929 1384 1.467 - 0.765 - - - - 0.702 - - zgc:100920 [Source:ZFIN;Acc:ZDB-GENE-040801-156]
14. tpm1 ENSDARG00000087402 1666 1.438 - 0.718 - - - - 0.720 - - tropomyosin 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-040426-854]
15. asun 483 0.919 - - - - - - 0.919 - - asunder, spermatogenesis regulator homolog (Drosphila), transcript variant X1
16. igsf9a ENSDARG00000075864 1870 0.879 - - - - - - 0.879 - - immunoglobulin superfamily, member 9a [Source:ZFIN;Acc:ZDB-GENE-060503-288]
17. snai1b ENSDARG00000046019 886 0.879 - 0.879 - - - - - - - snail family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-980526-514]
18. SCAF8 1618 0.865 - - - - - - 0.865 - - SR-related CTD-associated factor 8, transcript variant X3
19. enthd2 481 0.864 0.864 - - - - - - - - ENTH domain containing 2
20. tsfm ENSDARG00000060748, ENSDARG00000110047 1003 0.861 - 0.861 - - - - - - - Ts translation elongation factor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-061215-17]
21. fam174b ENSDARG00000068709 1171 0.858 - 0.858 - - - - - - - family with sequence similarity 174, member B [Source:ZFIN;Acc:ZDB-GENE-050419-78]
22. pmpcb ENSDARG00000016979 509 0.849 - 0.849 - - - - - - - peptidase (mitochondrial processing) beta [Source:ZFIN;Acc:ZDB-GENE-050220-10]
23. fynrk 527 0.849 0.849 - - - - - - - - fyn-related Src family tyrosine kinase
24. polr2gl ENSDARG00000056127 1771 0.845 - 0.845 - - - - - - - polymerase (RNA) II (DNA directed) polypeptide G-like [Source:ZFIN;Acc:ZDB-GENE-030131-2808]
25. si:dkey-156k2.6 si:dkey-156k2.6 848 0.843 - 0.843 - - - - - - -
26. ipo9 ENSDARG00000016753, ENSDARG00000113327 936 0.842 - 0.842 - - - - - - - importin 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2953]
27. casp3a ENSDARG00000017905, ENSDARG00000113754 2819 0.84 - 0.840 - - - - - - - caspase 3, apoptosis-related cysteine peptidase a [Source:ZFIN;Acc:ZDB-GENE-011210-1]
28. taf1 ENSDARG00000035330 912 0.839 - 0.839 - - - - - - - TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-5576]
29. COL23A1_1 COL23A1_1 720 0.836 - 0.836 - - - - - - -
30. ppcdc ENSDARG00000033020, ENSDARG00000109858 563 0.835 0.835 - - - - - - - - phosphopantothenoylcysteine decarboxylase [Source:ZFIN;Acc:ZDB-GENE-040426-1749]
31. zgc:114041 ENSDARG00000052109 76 0.834 0.834 - - - - - - - - zgc:114041 [Source:ZFIN;Acc:ZDB-GENE-050706-122]
32. slc7a6os ENSDARG00000010596 1599 0.833 - - - - - - 0.833 - - solute carrier family 7, member 6 opposite strand [Source:ZFIN;Acc:ZDB-GENE-041114-32]
33. six4b ENSDARG00000031983 265 0.833 - 0.833 - - - - - - - SIX homeobox 4b [Source:ZFIN;Acc:ZDB-GENE-010201-1]
34. mfge8b ENSDARG00000045803, ENSDARG00000113171 568 0.831 - - - - - - 0.831 - - milk fat globule-EGF factor 8 protein b [Source:ZFIN;Acc:ZDB-GENE-070209-137]
35. THEG ENSDARG00000078644 121 0.828 - 0.828 - - - - - - - theg spermatid protein [Source:ZFIN;Acc:ZDB-GENE-070912-59]
36. wdr45 ENSDARG00000090219 829 0.828 - - - - - - 0.828 - - WD repeat domain 45 [Source:ZFIN;Acc:ZDB-GENE-040426-990]
37. celsr1b ENSDARG00000058259 1219 0.827 - - - - - - 0.827 - - cadherin EGF LAG seven-pass G-type receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050823-4]
38. ZNF76 ENSDARG00000013279 260 0.826 0.826 - - - - - - - - zinc finger protein 76 [Source:ZFIN;Acc:ZDB-GENE-061027-379]
39. bxdc2 ENSDARG00000098935 1348 0.825 - 0.825 - - - - - - - brix domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060518-1]
40. ptk6a ENSDARG00000017947 682 0.824 0.824 - - - - - - - - PTK6 protein tyrosine kinase 6a [Source:ZFIN;Acc:ZDB-GENE-081105-117]
41. phf2 ENSDARG00000018691 3341 0.823 - 0.823 - - - - - - - PHD finger protein 2 [Source:ZFIN;Acc:ZDB-GENE-050302-10]
42. CORIN ENSDARG00000101281 654 0.822 - - - - - - 0.822 - - corin, serine peptidase [Source:ZFIN;Acc:ZDB-GENE-060224-3]
43. actr10 ENSDARG00000038432 1598 0.821 - 0.821 - - - - - - - ARP10 actin related protein 10 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-768]
44. sh2b1 ENSDARG00000057679, ENSDARG00000113263 2194 0.821 - 0.821 - - - - - - - SH2B adaptor protein 1 [Source:ZFIN;Acc:ZDB-GENE-070209-188]
45. acbd6 ENSDARG00000039456 2355 0.821 - 0.821 - - - - - - - acyl-CoA binding domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2810]
46. usp42 ENSDARG00000077300 926 0.82 - 0.820 - - - - - - - ubiquitin specific peptidase 42 [Source:ZFIN;Acc:ZDB-GENE-030131-5739]
47. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 0.819 - - - - - - 0.819 - - methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
48. phc2a ENSDARG00000056695, ENSDARG00000110253 1726 0.818 - 0.818 - - - - - - - polyhomeotic homolog 2a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-020312-1]
49. CR352225.2 CR352225.2 1138 0.818 0.818 - - - - - - - -
50. plcg1 ENSDARG00000038442 5324 0.818 - - - - - - 0.818 - - phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
51. slc4a1b ENSDARG00000024560 172 0.816 - 0.816 - - - - - - - solute carrier family 4 (anion exchanger), member 1b (Diego blood group) [Source:ZFIN;Acc:ZDB-GENE-110215-2]
52. slc6a9 ENSDARG00000018534 4089 0.814 - - - - - - 0.814 - - solute carrier family 6 (neurotransmitter transporter, glycine), member 9 [Source:ZFIN;Acc:ZDB-GENE-050105-3]
53. mtmr2 ENSDARG00000004616 1052 0.813 - - - 0.813 - - - - - myotubularin related protein 2 [Source:ZFIN;Acc:ZDB-GENE-990715-14]
54. ppargc1a ENSDARG00000067829 772 0.813 - 0.813 - - - - - - - peroxisome proliferator-activated receptor gamma, coactivator 1 alpha [Source:ZFIN;Acc:ZDB-GENE-080505-1]
55. si:ch73-21k16.6 si:ch73-21k16.6 4896 0.813 - 0.813 - - - - - - -
56. hells ENSDARG00000057738, ENSDARG00000112932, ENSDARG00000116012 1443 0.813 - 0.813 - - - - - - - helicase, lymphoid specific [Source:ZFIN;Acc:ZDB-GENE-030131-9923]
57. TACC2 1702 0.811 - 0.811 - - - - - - - transforming, acidic coiled-coil containing protein 2, transcript variant X17
58. suz12b ENSDARG00000098924, ENSDARG00000114239, ENSDARG00000114524 1947 0.811 - 0.811 - - - - - - - SUZ12, polycomb repressive complex 2 subunit b [Source:ZFIN;Acc:ZDB-GENE-030131-3255]
59. TTBK2_1 TTBK2_1 649 0.81 0.810 - - - - - - - -
60. CABZ01064447.1 CABZ01064447.1 348 0.81 - - - - - - 0.810 - -
61. zmiz1a ENSDARG00000074502 3920 0.81 - 0.810 - - - - - - - zinc finger, MIZ-type containing 1a [Source:ZFIN;Acc:ZDB-GENE-080220-27]
62. C3H17orf53 C3H17orf53 191 0.81 0.810 - - - - - - - -
63. si:dkey-182g1.2 ENSDARG00000052680, ENSDARG00000109368 147 0.809 0.809 - - - - - - - - si:dkey-182g1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-619]
64. klhl11 ENSDARG00000045130 800 0.808 - 0.808 - - - - - - - kelch-like family member 11 [Source:ZFIN;Acc:ZDB-GENE-030131-5524]
65. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 0.807 - - - - - - 0.807 - - pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
66. CABZ01038494.1 ENSDARG00000088258 908 0.806 0.806 - - - - - - - - modulator of smoothened a [Source:NCBI gene;Acc:100535551]
67. si:ch211-274p24.2 ENSDARG00000095185 92 0.805 - 0.805 - - - - - - - si:ch211-274p24.2 [Source:ZFIN;Acc:ZDB-GENE-050309-265]
68. phf8 ENSDARG00000006584 476 0.805 - - - - - - 0.805 - - PHD finger protein 8 [Source:ZFIN;Acc:ZDB-GENE-060419-1]
69. PCDH12 ENSDARG00000076594 381 0.804 - 0.804 - - - - - - - protocadherin 12 [Source:ZFIN;Acc:ZDB-GENE-140106-126]
70. ncapd2 ENSDARG00000005058 2819 0.804 - - - - - - 0.804 - - non-SMC condensin I complex, subunit D2 [Source:ZFIN;Acc:ZDB-GENE-050506-59]
71. CR293507.1 ENSDARG00000112572 3198 0.804 - - - - - 0.804 - - -
72. NBEAL1 ENSDARG00000099547 1112 0.803 - 0.803 - - - - - - - neurobeachin-like 1 [Source:ZFIN;Acc:ZDB-GENE-130530-544]
73. slc17a9a ENSDARG00000042954 36 0.803 0.803 - - - - - - - - solute carrier family 17 (vesicular nucleotide transporter), member 9a [Source:ZFIN;Acc:ZDB-GENE-081021-1]
74. myclb ENSDARG00000034956, ENSDARG00000110185 1466 0.802 - 0.802 - - - - - - - MYCL proto-oncogene, bHLH transcription factor b [Source:ZFIN;Acc:ZDB-GENE-030131-5561]
75. rpz5 ENSDARG00000075718 1703 0.802 - 0.802 - - - - - - - rapunzel 5 [Source:ZFIN;Acc:ZDB-GENE-030131-4678]
76. TMEM132E ENSDARG00000090830 1197 0.801 - - - - - - 0.801 - - transmembrane protein 132E [Source:ZFIN;Acc:ZDB-GENE-120926-3]
77. rasef ENSDARG00000076250 1359 0.801 - - - - - - 0.801 - - RAS and EF-hand domain containing [Source:ZFIN;Acc:ZDB-GENE-081105-157]
78. si:ch211-220f16.2 ENSDARG00000007976 638 0.801 0.801 - - - - - - - - si:ch211-220f16.2 [Source:ZFIN;Acc:ZDB-GENE-070912-199]
79. SCO1 ENSDARG00000067593, ENSDARG00000113312 258 0.801 0.801 - - - - - - - - SCO1 cytochrome c oxidase assembly protein [Source:ZFIN;Acc:ZDB-GENE-140909-1]
80. impdh1b ENSDARG00000029524 7472 0.8 - 0.800 - - - - - - - IMP (inosine 5'-monophosphate) dehydrogenase 1b [Source:ZFIN;Acc:ZDB-GENE-030219-206]
81. tnfaip8l3 ENSDARG00000088709 345 0.799 - 0.799 - - - - - - - tumor necrosis factor, alpha-induced protein 8-like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1313]
82. RANBP2 ENSDARG00000093125 1854 0.799 - 0.799 - - - - - - - RAN binding protein 2 [Source:HGNC Symbol;Acc:HGNC:9848]
83. usp14 ENSDARG00000025889 2701 0.798 - - - 0.798 - - - - - ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase) [Source:ZFIN;Acc:ZDB-GENE-030131-7676]
84. fkbp2 ENSDARG00000044540 1615 0.798 - 0.798 - - - - - - - FK506 binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040912-126]
85. clock3 clock3 136 0.798 0.798 - - - - - - - -
86. LRCH3 ENSDARG00000100679 147 0.798 - 0.798 - - - - - - - leucine-rich repeats and calponin homology (CH) domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-071004-44]
87. plekhf1 ENSDARG00000102435, ENSDARG00000110694 314 0.797 0.797 - - - - - - - - pleckstrin homology domain containing, family F (with FYVE domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1289]
88. ano10b ENSDARG00000018159 535 0.796 0.796 - - - - - - - - anoctamin 10b [Source:ZFIN;Acc:ZDB-GENE-061013-169]
89. TTC28 ENSDARG00000114920 580 0.796 - - - - - - 0.796 - - tetratricopeptide repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29179]
90. zgc:172120 ENSDARG00000069199 278 0.796 0.796 - - - - - - - - zgc:172120 [Source:ZFIN;Acc:ZDB-GENE-080204-46]
91. TUBGCP6 1991 0.796 - 0.796 - - - - - - - tubulin, gamma complex associated protein 6
92. reps1 ENSDARG00000002877 962 0.795 - 0.795 - - - - - - - RALBP1 associated Eps domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9536]
93. Mar-07 Mar-07 2926 0.795 - 0.795 - - - - - - -
94. eefsec ENSDARG00000004696 791 0.794 - - - 0.794 - - - - - eukaryotic elongation factor, selenocysteine-tRNA-specific [Source:ZFIN;Acc:ZDB-GENE-051120-72]
95. fam78a fam78a 238 0.793 - 0.793 - - - - - - -
96. eaf1 ENSDARG00000070795, ENSDARG00000113962 834 0.793 - - - - - - 0.793 - - ELL associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-040625-109]
97. tceb1a 969 0.793 - 0.793 - - - - - - - transcription elongation factor B (SIII), polypeptide 1a, transcript variant X4
98. fam160b2 ENSDARG00000060029, ENSDARG00000115630 221 0.793 0.793 - - - - - - - - family with sequence similarity 160, member B2 [Source:ZFIN;Acc:ZDB-GENE-061110-76]
99. plagx ENSDARG00000036855 3768 0.792 - - - - - - 0.792 - - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
100. hnrnpr ENSDARG00000014569 3423 0.792 - - - - - - 0.792 - - heterogeneous nuclear ribonucleoprotein R [Source:ZFIN;Acc:ZDB-GENE-040426-2766]

There are 573 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA