Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for klhl40a

Gene Name Gene ID Reads Annotation
klhl40a ENSDARG00000039052 2537 kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]










Genes with expression patterns similar to klhl40a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. klhl40a ENSDARG00000039052 2537 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
2. ATP5J_2 ATP5J_2 2381 5.611 0.843 0.846 - 0.712 - 0.822 0.896 0.736 0.756
3. cap2 ENSDARG00000104478 3266 5.551 0.795 0.837 - 0.758 0.705 0.827 0.896 0.733 - CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
4. fitm1 ENSDARG00000056464 1759 4.959 0.854 0.958 0.725 - - 0.770 0.924 0.728 - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
5. sptb ENSDARG00000030490 7128 4.93 0.821 0.890 0.728 - - 0.850 0.937 - 0.704 spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
6. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 4.897 0.867 0.755 - - - 0.839 0.940 0.753 0.743 LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
7. stac3 ENSDARG00000098883 1765 4.896 0.811 0.861 0.714 0.803 - 0.825 0.882 - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
8. tnnc1b ENSDARG00000037539 13945 4.799 - 0.878 0.769 - 0.704 0.827 0.879 - 0.742 troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
9. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 4.35 0.920 0.911 0.718 - - 0.865 0.936 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
10. txlnbb ENSDARG00000076241 6396 4.297 0.832 0.920 0.711 - - 0.885 0.949 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
11. chrna1 ENSDARG00000009021 2931 4.28 0.888 0.865 - - - 0.846 0.953 - 0.728 cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
12. klhl41b ENSDARG00000006757 10762 4.266 0.824 - 0.842 - 0.785 0.851 0.964 - - kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
13. nexn ENSDARG00000057317 10972 4.203 0.913 - 0.723 0.722 - 0.897 0.948 - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
14. DNAJA4 ENSDARG00000051762 5657 4.172 - 0.850 0.778 - - 0.887 0.943 0.714 - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
15. PTGES3L PTGES3L 4801 4.146 0.839 - 0.750 - 0.768 0.846 0.943 - -
16. myod1 ENSDARG00000030110 6019 4.127 0.840 0.841 - - - 0.806 0.939 - 0.701 myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
17. obsl1b ENSDARG00000077388 2511 4.088 0.806 0.863 - - - 0.776 0.876 0.767 - obscurin-like 1b [Source:ZFIN;Acc:ZDB-GENE-050809-29]
18. AIMP1 ENSDARG00000060036 4136 4.087 0.825 0.857 0.726 0.748 - 0.931 - - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
19. apobec2a ENSDARG00000018881 4790 3.97 0.857 0.875 0.742 - - - - 0.732 0.764 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2a [Source:ZFIN;Acc:ZDB-GENE-050306-15]
20. hsp90aa1.1 ENSDARG00000010478 47784 3.915 0.713 - - 0.704 0.813 0.749 0.936 - - heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
21. smyhc1 ENSDARG00000099959, ENSDARG00000115916 48476 3.866 0.787 - 0.808 0.788 0.774 - - - 0.709 slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
22. ryr3 ENSDARG00000071331 6795 3.555 0.859 0.877 - - - 0.886 0.933 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
23. TENC1 TENC1 1729 3.536 0.955 0.854 - - - 0.867 0.860 - -
24. FHOD3_1 FHOD3_1 983 3.518 0.900 0.892 - - - 0.801 0.925 - -
25. cacng1 cacng1 3118 3.514 0.921 0.913 - - - 0.808 0.872 - -
26. NRAP ENSDARG00000009341 3565 3.512 0.848 0.820 - - - 0.893 0.951 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
27. sh3bgr ENSDARG00000021633 3498 3.492 0.841 0.880 - - - 0.820 0.951 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
28. TRIM63 TRIM63 1600 3.489 0.820 0.832 - - - 0.870 0.967 - -
29. trdn ENSDARG00000041779 4283 3.483 0.899 0.832 - - - 0.816 0.936 - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
30. gypc ENSDARG00000041546 1487 3.463 0.797 0.896 - - - 0.814 0.956 - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
31. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 3.462 0.905 0.903 - - - - 0.918 0.736 - ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
32. EHBP1L1 EHBP1L1 2500 3.443 0.839 0.925 - - - 0.757 0.922 - -
33. limch1a ENSDARG00000074275 2981 3.443 0.839 0.891 - - - 0.793 0.920 - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
34. srl ENSDARG00000104587 11126 3.439 0.870 0.926 - 0.712 - - 0.931 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
35. ITGB1BP2 ENSDARG00000030176 2472 3.431 0.856 0.951 - - - - 0.921 - 0.703 integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
36. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 3.429 0.851 0.859 - - - 0.908 0.811 - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
37. kcnma1a ENSDARG00000079840 2584 3.426 0.801 0.918 - - - 0.811 0.896 - - potassium large conductance calcium-activated channel, subfamily M, alpha member 1a [Source:ZFIN;Acc:ZDB-GENE-070202-9]
38. MYOT ENSDARG00000076312 1791 3.419 0.888 0.871 - - - 0.789 0.871 - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
39. PTPLA PTPLA 4044 3.419 0.801 0.832 - - - 0.845 0.941 - -
40. cfl2 ENSDARG00000014106 8051 3.416 0.876 0.931 - 0.757 - - 0.852 - - cofilin 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1815]
41. xirp2a ENSDARG00000071113 7113 3.411 0.870 0.906 - - - - 0.902 - 0.733 xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
42. znf106a ENSDARG00000016651 6049 3.404 0.867 0.909 - - - - 0.928 - 0.700 zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
43. ntmt1 ENSDARG00000022399 5779 3.395 0.849 0.926 - 0.751 - - 0.869 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
44. CU638714.1 ENSDARG00000100303 2132 3.377 0.820 0.893 - - 0.776 - 0.888 - -
45. smtnl1 ENSDARG00000041257 7410 3.375 0.853 - - 0.733 - 0.864 0.925 - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
46. alpk3a ENSDARG00000078989 1992 3.374 0.805 0.950 - - - 0.740 0.879 - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
47. txnipb ENSDARG00000070000 2365 3.349 0.793 0.854 - - - 0.838 0.864 - - thioredoxin interacting protein b [Source:ZFIN;Acc:ZDB-GENE-040917-1]
48. CR847973.1 ENSDARG00000115516 8754 3.341 0.830 0.770 - - - 0.822 0.919 - -
49. SPEG SPEG 4017 3.322 0.870 - 0.700 0.790 - - 0.962 - -
50. ppapdc3 ppapdc3 4924 3.321 0.798 - - - 0.785 0.810 0.928 - -
51. vwde ENSDARG00000103443 5758 3.309 0.740 0.887 - - - 0.823 0.859 - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
52. alpk2 ENSDARG00000079637 1483 3.309 0.755 0.889 - - - 0.798 0.867 - - alpha-kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1868]
53. jph1a ENSDARG00000058603 2852 3.295 - 0.900 - - - 0.779 0.913 - 0.703 junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
54. myoz2a ENSDARG00000012311 1373 3.284 0.774 0.825 - - - 0.808 0.877 - - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
55. myhc4 ENSDARG00000035438 1322 3.281 0.715 0.897 - - - 0.796 0.873 - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
56. vcl vcl 6667 3.266 0.855 0.909 - 0.779 - - - - 0.723
57. tnnt2d ENSDARG00000002988 7590 3.265 0.816 0.844 - - - 0.738 0.867 - - troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
58. BX324201.1 BX324201.1 3302 3.255 0.882 - - - - - 0.922 0.742 0.709
59. mdh1b ENSDARG00000018008 3196 3.248 0.816 0.709 - - - 0.773 0.950 - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
60. si:ch211-242b18.1 ENSDARG00000054723 2929 3.237 0.716 0.930 - - - 0.786 0.805 - - si:ch211-242b18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1518]
61. CU633479.5 ENSDARG00000114818 1815 3.231 0.743 0.896 - - - 0.712 0.880 - -
62. myoz2b ENSDARG00000037266 2139 3.213 0.750 0.831 - - - 0.787 0.845 - - myozenin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1853]
63. CR388002.1 CR388002.1 1998 3.212 0.797 0.936 - - 0.728 - 0.751 - -
64. aqp4 ENSDARG00000010565 624 3.211 0.870 0.810 - - - 0.738 0.793 - - aquaporin 4 [Source:ZFIN;Acc:ZDB-GENE-040724-152]
65. tmem41ab ENSDARG00000026771, ENSDARG00000114061, ENSDARG00000116237 641 3.209 0.835 0.728 - - - 0.753 0.893 - - transmembrane protein 41ab [Source:ZFIN;Acc:ZDB-GENE-040426-2050]
66. mir133b_1 671 3.164 0.876 0.840 - - - 0.701 0.747 - - microRNA 133b
67. PTP4A3 ENSDARG00000039997 3814 3.141 0.841 0.814 - - - 0.731 0.755 - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
68. sucla2 ENSDARG00000005359 5992 3.136 0.731 0.828 - - - 0.851 - - 0.726 succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
69. tomm34 ENSDARG00000001557 1874 3.132 0.718 0.802 - - - 0.787 0.825 - - translocase of outer mitochondrial membrane 34 [Source:ZFIN;Acc:ZDB-GENE-030131-2081]
70. svila ENSDARG00000055075, ENSDARG00000110002, ENSDARG00000114888 4078 3.13 0.867 - - - 0.736 0.715 0.812 - - supervillin a [Source:ZFIN;Acc:ZDB-GENE-990706-5]
71. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 3.121 0.769 0.801 - - - 0.728 0.823 - - solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]
72. tpma ENSDARG00000033683 752432 3.119 0.866 - - 0.726 - - 0.822 0.705 - alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
73. sox6 ENSDARG00000015536 7728 3.117 0.842 - - - 0.715 0.721 0.839 - - SRY (sex determining region Y)-box 6 [Source:ZFIN;Acc:ZDB-GENE-081120-6]
74. mef2ca ENSDARG00000029764 18547 3.109 0.799 0.840 0.702 - 0.768 - - - - myocyte enhancer factor 2ca [Source:ZFIN;Acc:ZDB-GENE-980526-253]
75. arvcfb ENSDARG00000061688 2388 3.101 0.742 0.811 - - - 0.714 0.834 - - ARVCF, delta catenin family member b [Source:ZFIN;Acc:ZDB-GENE-060526-60]
76. klhl31 ENSDARG00000039066 13656 3.078 - - 0.733 0.814 - - 0.790 - 0.741 kelch-like family member 31 [Source:ZFIN;Acc:ZDB-GENE-030131-2052]
77. acta1b ENSDARG00000055618 195597 3.075 0.857 - - - - 0.738 0.762 0.718 - actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
78. tnni2b.1 ENSDARG00000035958 51597 3.063 0.768 - 0.797 - 0.782 - - - 0.716 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
79. pi15a ENSDARG00000045378 2361 3.04 0.718 0.762 - - - 0.800 0.760 - - peptidase inhibitor 15a [Source:ZFIN;Acc:ZDB-GENE-040724-135]
80. SYNPO2 SYNPO2 7382 3.034 - - - - - 0.879 0.709 0.736 0.710
81. tspan12 ENSDARG00000032389 419 2.983 0.742 0.727 - - - 0.708 0.806 - - tetraspanin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1285]
82. zgc:92518 ENSDARG00000016343 3837 2.724 0.891 - - - - 0.892 0.941 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
83. pygma ENSDARG00000055518 15972 2.714 0.917 0.876 - - - - 0.921 - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
84. si:ch211-114n24.7 si:ch211-114n24.7 2544 2.699 0.846 0.940 - - - - 0.913 - -
85. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 2.691 0.885 - - - - 0.859 0.947 - - fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
86. BX294434.1 ENSDARG00000061272 6493 2.686 0.884 0.864 - - - - 0.938 - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
87. COL22A1 COL22A1 4473 2.681 0.866 0.848 - - - - 0.967 - -
88. pbxip1a ENSDARG00000071015 4960 2.675 0.835 0.920 - - - - 0.920 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
89. hhatla ENSDARG00000039051 6598 2.663 0.889 0.832 - - - - 0.942 - - hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
90. TMPO TMPO 3264 2.66 0.837 0.901 - - - - 0.922 - -
91. cacna2d1a ENSDARG00000014804 1924 2.657 0.867 0.898 - - - - 0.892 - - calcium channel, voltage-dependent, alpha 2/delta subunit 1a [Source:ZFIN;Acc:ZDB-GENE-041210-215]
92. zgc:158296 ENSDARG00000070923 3935 2.647 - 0.872 - - - 0.850 0.925 - - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
93. mybpc2b ENSDARG00000021265 9618 2.623 0.878 0.851 - - - - 0.894 - - myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
94. hapln1a ENSDARG00000089769 12334 2.62 0.830 0.867 - - - - 0.923 - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
95. MYOM1 MYOM1 3870 2.617 0.844 0.861 - - - - 0.912 - -
96. C13H10orf71 3489 2.616 0.801 0.921 - - - - 0.894 - - chromosome 13 C10orf71 homolog
97. srpk3 ENSDARG00000005916 1546 2.614 0.828 0.922 - - - - 0.864 - - SRSF protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-101025-2]
98. rp42-pen rp42-pen 3395 2.613 - 0.903 - - - 0.822 0.888 - -
99. smyd2b ENSDARG00000005629 8181 2.611 0.872 0.892 - - - 0.847 - - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
100. tgm2a ENSDARG00000070157 4516 2.598 0.901 - - - - 0.804 0.893 - - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]

There are 1570 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA