Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for klf3

Gene Name Gene ID Reads Annotation
klf3 ENSDARG00000015495, ENSDARG00000114143 1640 Kruppel-like factor 3 (basic) [Source:ZFIN;Acc:ZDB-GENE-011116-1]










Genes with expression patterns similar to klf3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. klf3 ENSDARG00000015495, ENSDARG00000114143 1640 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Kruppel-like factor 3 (basic) [Source:ZFIN;Acc:ZDB-GENE-011116-1]
2. slc3a2a ENSDARG00000036427, ENSDARG00000112231 2967 2.507 - 0.941 - - 0.728 - 0.838 - - solute carrier family 3 (amino acid transporter heavy chain), member 2a [Source:ZFIN;Acc:ZDB-GENE-000831-3]
3. spns1 ENSDARG00000011925, ENSDARG00000111727 3126 2.49 0.814 - - - - 0.923 0.753 - - spinster homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-020228-1]
4. aldh4a1 ENSDARG00000038207 4639 2.446 - 0.855 - - - 0.749 0.842 - - aldehyde dehydrogenase 4 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-040426-1179]
5. sidt2 ENSDARG00000045976 1997 2.384 0.862 - - - - 0.799 0.723 - - SID1 transmembrane family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7356]
6. zgc:158309 zgc:158309 2696 2.336 0.789 - - - - 0.745 0.802 - -
7. man2b1 ENSDARG00000001897 1042 2.31 - - 0.734 - - 0.779 0.797 - - mannosidase, alpha, class 2B, member 1 [Source:ZFIN;Acc:ZDB-GENE-050327-52]
8. fbp1b ENSDARG00000020364, ENSDARG00000111266 10050 2.305 - - - - 0.709 0.864 0.732 - - fructose-1,6-bisphosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-021206-11]
9. pptc7a ENSDARG00000011122 739 2.304 0.784 - - - - 0.742 0.778 - - PTC7 protein phosphatase homolog a [Source:ZFIN;Acc:ZDB-GENE-041114-74]
10. atp8a2 ENSDARG00000077492 3637 2.274 0.818 - - - - 0.738 0.718 - - ATPase phospholipid transporting 8A2 [Source:ZFIN;Acc:ZDB-GENE-100209-2]
11. slc22a6l ENSDARG00000055523 370 2.205 0.721 - 0.778 - - 0.706 - - - solute carrier family 22 (organic anion transporter), member 6, like [Source:ZFIN;Acc:ZDB-GENE-040426-2249]
12. gata5 ENSDARG00000017821 1146 1.888 - 0.971 - - - 0.917 - - - GATA binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-980526-340]
13. CU928070.1 CU928070.1 1152 1.849 - 0.966 - - - 0.883 - - -
14. ass1 8099 1.83 - 0.954 - - - 0.876 - - - argininosuccinate synthase 1
15. grhprb ENSDARG00000019986, ENSDARG00000109547 3233 1.827 - 0.955 - - - 0.872 - - - glyoxylate reductase/hydroxypyruvate reductase b [Source:ZFIN;Acc:ZDB-GENE-040426-1847]
16. ak3 ENSDARG00000058226 3160 1.791 - 0.971 - - - - 0.820 - - adenylate kinase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2142]
17. tex2 ENSDARG00000078186 2467 1.788 0.826 0.962 - - - - - - - testis expressed 2 [Source:ZFIN;Acc:ZDB-GENE-070615-7]
18. lpar2b ENSDARG00000042561 1086 1.774 - 0.964 - - - 0.810 - - - lysophosphatidic acid receptor 2b [Source:ZFIN;Acc:ZDB-GENE-051120-99]
19. atg16l1 ENSDARG00000099430 924 1.75 0.791 0.959 - - - - - - - ATG16 autophagy related 16-like 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-401]
20. hoxc12a ENSDARG00000070352 7409 1.747 - 0.839 - - - 0.908 - - - homeobox C12a [Source:ZFIN;Acc:ZDB-GENE-000822-6]
21. exoc1 ENSDARG00000043019 819 1.747 - 0.962 0.785 - - - - - - exocyst complex component 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1057]
22. ftr82 ENSDARG00000055647 3302 1.745 - 0.917 - - - - 0.828 - - finTRIM family, member 82 [Source:ZFIN;Acc:ZDB-GENE-030219-207]
23. prkacba ENSDARG00000001782 1340 1.743 0.842 - - - - 0.901 - - - protein kinase, cAMP-dependent, catalytic, beta a [Source:ZFIN;Acc:ZDB-GENE-040426-1351]
24. slc1a4 ENSDARG00000000551 4298 1.742 - 0.935 - - - 0.807 - - - solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-030616-566]
25. CPT1A CPT1A 4004 1.741 - 0.889 - - - 0.852 - - -
26. cask cask 3384 1.738 - 0.945 - - - 0.793 - - -
27. arhgef1b ENSDARG00000055837 2330 1.734 0.744 0.990 - - - - - - - Rho guanine nucleotide exchange factor (GEF) 1b [Source:ZFIN;Acc:ZDB-GENE-060616-136]
28. TIFA TIFA 1519 1.733 - 0.956 - - - - 0.777 - -
29. SMARCA1 ENSDARG00000012776 673 1.727 - 0.963 - - - - 0.764 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Source:ZFIN;Acc:ZDB-GENE-070705-296]
30. f10 ENSDARG00000088581 4968 1.707 - - - - - 0.903 0.804 - - coagulation factor X [Source:ZFIN;Acc:ZDB-GENE-021206-9]
31. ptpn13 ENSDARG00000103699 2866 1.707 - 0.963 - - - - 0.744 - - protein tyrosine phosphatase, non-receptor type 13 [Source:ZFIN;Acc:ZDB-GENE-070410-72]
32. dse ENSDARG00000017988 2169 1.702 - 0.981 - - - 0.721 - - - dermatan sulfate epimerase [Source:ZFIN;Acc:ZDB-GENE-041001-202]
33. renbp ENSDARG00000008931 1848 1.701 - - - - - 0.787 0.914 - - renin binding protein [Source:ZFIN;Acc:ZDB-GENE-041212-34]
34. gpr137 ENSDARG00000037244 801 1.694 - - - - - 0.856 0.838 - - G protein-coupled receptor 137 [Source:ZFIN;Acc:ZDB-GENE-040718-443]
35. slc35f6 ENSDARG00000016745, ENSDARG00000114790 3823 1.691 - - - - - 0.879 0.812 - - solute carrier family 35, member F6 [Source:ZFIN;Acc:ZDB-GENE-040718-297]
36. nt5c3a ENSDARG00000058597 14299 1.691 - - - - - 0.904 0.787 - - 5'-nucleotidase, cytosolic IIIA [Source:ZFIN;Acc:ZDB-GENE-030131-439]
37. rpe ENSDARG00000005251, ENSDARG00000117024 3865 1.691 - - - - - 0.879 0.812 - - ribulose-5-phosphate-3-epimerase [Source:ZFIN;Acc:ZDB-GENE-030131-6837]
38. nuak2 ENSDARG00000063661 610 1.689 0.866 - - - - 0.823 - - - NUAK family, SNF1-like kinase, 2 [Source:ZFIN;Acc:ZDB-GENE-050208-563]
39. ncam1b ENSDARG00000007220 233 1.689 - 0.960 0.729 - - - - - - neural cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-010822-2]
40. CD68 CD68 4599 1.686 - - - - - 0.910 0.776 - -
41. ugt1ab 545 1.683 - 0.900 - - - 0.783 - - - UDP glucuronosyltransferase 1 family a, b
42. plg ENSDARG00000023111 2429 1.683 0.832 - - - - 0.851 - - - plasminogen [Source:ZFIN;Acc:ZDB-GENE-030131-1411]
43. tnfaip8l2b ENSDARG00000046148 1133 1.683 - 0.959 - - - - 0.724 - - tumor necrosis factor, alpha-induced protein 8-like 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1359]
44. anapc16 ENSDARG00000013822 5857 1.675 0.722 0.953 - - - - - - - anaphase promoting complex subunit 16 [Source:ZFIN;Acc:ZDB-GENE-050417-430]
45. tmed1a ENSDARG00000031325 1936 1.674 - - - - - 0.901 0.773 - - transmembrane p24 trafficking protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-229]
46. carhsp1 ENSDARG00000053129 2100 1.674 - 0.956 - - - 0.718 - - - calcium regulated heat stable protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1479]
47. gyltl1b 1368 1.674 - 0.957 - - - - 0.717 - - glycosyltransferase-like 1b, transcript variant X3
48. cd9a ENSDARG00000005842 1708 1.672 - - - - - 0.906 0.766 - - CD9 molecule a [Source:ZFIN;Acc:ZDB-GENE-030131-1175]
49. MPC2 ENSDARG00000024478 4194 1.67 - - - - - 0.900 0.770 - - mitochondrial pyruvate carrier 2 [Source:ZFIN;Acc:ZDB-GENE-030131-330]
50. PRPSAP1 ENSDARG00000099222 1249 1.666 - - - - - 0.850 0.816 - - phosphoribosyl pyrophosphate synthetase-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040704-40]
51. pck1 ENSDARG00000013522 1657 1.664 - - - - - 0.927 0.737 - - phosphoenolpyruvate carboxykinase 1 (soluble) [Source:ZFIN;Acc:ZDB-GENE-030909-11]
52. GATAD2B ENSDARG00000005834 3855 1.66 0.702 0.958 - - - - - - - GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
53. ca15a ENSDARG00000015654 2657 1.657 - 0.820 - - - 0.837 - - - carbonic anhydrase XVa [Source:ZFIN;Acc:ZDB-GENE-070424-7]
54. znf385a ENSDARG00000009899 3433 1.644 - 0.939 - - - 0.705 - - - zinc finger protein 385A [Source:ZFIN;Acc:ZDB-GENE-090313-255]
55. akr1a1a ENSDARG00000035257, ENSDARG00000109404 548 1.643 - - - - - 0.915 0.728 - - aldo-keto reductase family 1, member A1a (aldehyde reductase) [Source:ZFIN;Acc:ZDB-GENE-040808-44]
56. bach1 bach1 1121 1.64 0.826 - - - - 0.814 - - -
57. mpp1 ENSDARG00000105287 1359 1.634 - - - - - 0.781 0.853 - - membrane protein, palmitoylated 1 [Source:ZFIN;Acc:ZDB-GENE-031113-4]
58. gnpda1 ENSDARG00000037307, ENSDARG00000109317, ENSDARG00000114846 2191 1.634 0.865 - - - - 0.769 - - - glucosamine-6-phosphate deaminase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-417]
59. pepd ENSDARG00000102249 2644 1.633 - - - - - 0.735 0.898 - - peptidase D [Source:ZFIN;Acc:ZDB-GENE-030131-9444]
60. dpydb ENSDARG00000010267 831 1.632 - - - - - 0.903 0.729 - - dihydropyrimidine dehydrogenase b [Source:ZFIN;Acc:ZDB-GENE-040426-2459]
61. atp6v0ca ENSDARG00000057853 23277 1.63 - - - - - 0.847 0.783 - - ATPase H+ transporting V0 subunit ca [Source:ZFIN;Acc:ZDB-GENE-020419-23]
62. pi4k2a ENSDARG00000033666 1257 1.628 - - - - - 0.889 0.739 - - phosphatidylinositol 4-kinase type 2 alpha [Source:ZFIN;Acc:ZDB-GENE-040426-2675]
63. lgals2b ENSDARG00000038153 2196 1.626 - - - - - 0.834 0.792 - - lectin, galactoside-binding, soluble, 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1590]
64. fabp1b.1 ENSDARG00000059227 5670 1.625 0.808 - - - - 0.817 - - - fatty acid binding protein 1b, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050522-96]
65. si:dkeyp-89c11.2 si:dkeyp-89c11.2 683 1.621 - - - - - 0.854 0.767 - -
66. g6pca.2 ENSDARG00000013721 2034 1.621 - - - - - 0.801 0.820 - - glucose-6-phosphatase a, catalytic subunit, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050309-17]
67. dpp7 ENSDARG00000027750, ENSDARG00000112154, ENSDARG00000115933 2341 1.62 - 0.865 - - - 0.755 - - - dipeptidyl-peptidase 7 [Source:ZFIN;Acc:ZDB-GENE-050306-16]
68. tmem110l ENSDARG00000045518 1783 1.62 - - - - - 0.912 0.708 - - transmembrane protein 110, like [Source:ZFIN;Acc:ZDB-GENE-040426-912]
69. mtdha ENSDARG00000014159, ENSDARG00000115030 9903 1.619 - 0.912 - - - - 0.707 - - metadherin a [Source:ZFIN;Acc:ZDB-GENE-030616-615]
70. mthfd1b ENSDARG00000040492 3784 1.619 - - - - - 0.835 0.784 - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b [Source:ZFIN;Acc:ZDB-GENE-020905-4]
71. cst3 ENSDARG00000007795 13753 1.619 - - - - - 0.874 0.745 - - cystatin C (amyloid angiopathy and cerebral hemorrhage) [Source:ZFIN;Acc:ZDB-GENE-030131-373]
72. epas1a ENSDARG00000008697 3225 1.617 - - - - - 0.807 0.810 - - endothelial PAS domain protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4490]
73. dusp22a ENSDARG00000056396 605 1.617 - - - - - 0.901 0.716 - - dual specificity phosphatase 22a [Source:ZFIN;Acc:ZDB-GENE-040718-219]
74. slc47a1 ENSDARG00000046012 1426 1.615 - - - - - 0.794 0.821 - - solute carrier family 47 (multidrug and toxin extrusion), member 1 [Source:ZFIN;Acc:ZDB-GENE-050327-20]
75. serpina1 ENSDARG00000090286 8108 1.612 0.745 - - - - 0.867 - - - serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1421]
76. c8b ENSDARG00000039517 1731 1.611 0.792 - - - - 0.819 - - - complement component 8, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-070912-163]
77. tcn2l tcn2l 2428 1.61 - - - - - 0.829 0.781 - -
78. ftcd ENSDARG00000007421 2228 1.609 0.786 - - - - 0.823 - - - formimidoyltransferase cyclodeaminase [Source:ZFIN;Acc:ZDB-GENE-030131-9643]
79. C3_2 C3_2 1084 1.609 - - - - - 0.777 0.832 - -
80. npl ENSDARG00000009390 1377 1.606 - - - - - 0.815 0.791 - - N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase) [Source:ZFIN;Acc:ZDB-GENE-030131-926]
81. BX004812.1 ENSDARG00000096968 5467 1.605 0.715 - - - - 0.890 - - -
82. KRT18 ENSDARG00000018404, ENSDARG00000109528 6022 1.604 - - - - - 0.858 0.746 - - keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
83. mtp_1 3298 1.602 0.853 - - - - 0.749 - - - microsomal triglyceride transfer protein
84. zgc:64085 zgc:64085 955 1.6 - - - - - 0.835 0.765 - -
85. zgc:194887 ENSDARG00000098586 437 1.6 - - - - - 0.773 0.827 - - zgc:194887 [Source:ZFIN;Acc:ZDB-GENE-081022-162]
86. etfb ENSDARG00000009250 13036 1.599 - - - - - 0.776 0.823 - - electron transfer flavoprotein subunit beta [Source:ZFIN;Acc:ZDB-GENE-040426-1931]
87. COL4A3BP COL4A3BP 3288 1.598 0.869 - - - - - 0.729 - -
88. zgc:100868 ENSDARG00000004748 2582 1.598 0.744 - - - - 0.854 - - - zgc:100868 [Source:ZFIN;Acc:ZDB-GENE-040801-33]
89. hebp2 ENSDARG00000042630 2308 1.596 - - - - - 0.782 0.814 - - heme binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-914]
90. cideb ENSDARG00000012640 620 1.596 0.881 - - - - 0.715 - - - cell death-inducing DFFA-like effector b [Source:ZFIN;Acc:ZDB-GENE-080514-2]
91. zgc:162608 ENSDARG00000069375 2881 1.587 0.813 - - - - 0.774 - - - zgc:162608 [Source:ZFIN;Acc:ZDB-GENE-070410-86]
92. zgc:152830 ENSDARG00000079932 12194 1.586 - - - - - 0.832 0.754 - - zgc:152830 [Source:ZFIN;Acc:ZDB-GENE-090312-55]
93. sardh ENSDARG00000058102, ENSDARG00000112110 2150 1.579 - - - - - 0.799 0.780 - - sarcosine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-996]
94. miox ENSDARG00000002764 588 1.574 - - - - - 0.820 0.754 - - myo-inositol oxygenase [Source:ZFIN;Acc:ZDB-GENE-050913-113]
95. rab5b ENSDARG00000016059, ENSDARG00000114966 1252 1.572 0.791 - - - - - 0.781 - - RAB5B, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040426-2593]
96. rrm2b ENSDARG00000033367, ENSDARG00000115899 2754 1.57 - 0.702 - - - 0.868 - - - ribonucleotide reductase M2 b [Source:ZFIN;Acc:ZDB-GENE-030616-614]
97. lrrc58b ENSDARG00000063509 1357 1.569 - - - - - 0.703 0.866 - - leucine rich repeat containing 58b [Source:ZFIN;Acc:ZDB-GENE-050309-29]
98. cyp2aa9 ENSDARG00000098890 839 1.569 0.815 - - - - 0.754 - - - cytochrome P450, family 2, subfamily AA, polypeptide 9 [Source:ZFIN;Acc:ZDB-GENE-080724-3]
99. zgc:91909 ENSDARG00000021287 1488 1.568 - - - - - - 0.787 0.781 - zgc:91909 [Source:ZFIN;Acc:ZDB-GENE-040704-16]
100. slc39a5 ENSDARG00000079525 2157 1.563 - - - 0.722 - 0.841 - - - solute carrier family 39 (zinc transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060608-1]

There are 1300 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA