Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for khdrbs2

Gene Name Gene ID Reads Annotation
khdrbs2 ENSDARG00000069469 160 KH domain containing, RNA binding, signal transduction associated 2 [Source:ZFIN;Acc:ZDB-GENE-061013-497]










Genes with expression patterns similar to khdrbs2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. khdrbs2 ENSDARG00000069469 160 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 KH domain containing, RNA binding, signal transduction associated 2 [Source:ZFIN;Acc:ZDB-GENE-061013-497]
2. syngr3a ENSDARG00000014871 405 2.449 - 0.806 - - 0.806 0.837 - - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
3. syt11b ENSDARG00000056105 578 1.921 - 0.974 - - - 0.947 - - - synaptotagmin XIb [Source:ZFIN;Acc:ZDB-GENE-090601-7]
4. porcn ENSDARG00000052558, ENSDARG00000111556 110 1.913 - 1.000 - - - 0.913 - - - porcupine O-acyltransferase [Source:ZFIN;Acc:ZDB-GENE-081105-87]
5. ptf1a ENSDARG00000014479 349 1.894 - 1.000 - - - 0.894 - - - pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
6. CU179656.1 ENSDARG00000107086 270 1.892 - 0.969 - - - 0.923 - - -
7. CT573433.2 CT573433.2 115 1.851 - 1.000 - - - 0.851 - - -
8. tspan3b ENSDARG00000053559, ENSDARG00000112641 118 1.815 - 1.000 - - - 0.815 - - - tetraspanin 3b [Source:ZFIN;Acc:ZDB-GENE-070424-42]
9. si:ch211-218c6.9 si:ch211-218c6.9 40 1.811 - 1.000 - - 0.811 - - - -
10. kcnip1b ENSDARG00000034808, ENSDARG00000111766 136 1.807 - 1.000 - - 0.807 - - - - Kv channel interacting protein 1 b [Source:ZFIN;Acc:ZDB-GENE-041212-57]
11. prdm14 ENSDARG00000045371 106 1.803 - 1.000 - - - 0.803 - - - PR domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2709]
12. scn2b ENSDARG00000101713 796 1.795 - 0.909 - - - 0.886 - - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
13. zbtb20 ENSDARG00000005586 195 1.789 - 1.000 - - - 0.789 - - - zinc finger and BTB domain containing 20 [Source:ZFIN;Acc:ZDB-GENE-070112-1992]
14. si:ch211-152f6.6 si:ch211-152f6.6 278 1.776 - 0.946 - - - 0.830 - - -
15. GJD2_1 GJD2_1 3045 1.766 - 1.000 - - - 0.766 - - -
16. NPAS3 ENSDARG00000109820 362 1.758 - 1.000 - - - 0.758 - - - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
17. gng3 ENSDARG00000009553 2530 1.755 - 0.929 - - - 0.826 - - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
18. zic6 ENSDARG00000071496 402 1.753 - 0.907 - - - 0.846 - - - zic family member 6 [Source:ZFIN;Acc:ZDB-GENE-061207-1]
19. neflb ENSDARG00000012426 298 1.747 - 1.000 - - - 0.747 - - - neurofilament, light polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060312-44]
20. SCAMP5 SCAMP5 19 1.744 - 1.000 - - - 0.744 - - -
21. ZBTB26 ENSDARG00000028949 129 1.741 - 0.971 - - - 0.770 - - - zinc finger and BTB domain containing 26 [Source:HGNC Symbol;Acc:HGNC:23383]
22. si:dkey-272j9.2 si:dkey-272j9.2 91 1.735 - 1.000 - - - 0.735 - - -
23. si:dkey-122c11.4 si:dkey-122c11.4 13 1.735 - 1.000 - - - 0.735 - - -
24. syt9b ENSDARG00000029239 31 1.735 - 1.000 - - - 0.735 - - - synaptotagmin IXb [Source:ZFIN;Acc:ZDB-GENE-040822-6]
25. tagln3a ENSDARG00000079805 123 1.733 - 1.000 - - - 0.733 - - - transgelin 3a [Source:ZFIN;Acc:ZDB-GENE-060531-53]
26. tmem179 ENSDARG00000013292 343 1.729 - 0.946 - - - 0.783 - - - transmembrane protein 179 [Source:ZFIN;Acc:ZDB-GENE-040808-25]
27. BX537305.1 ENSDARG00000113834 10 1.718 0.718 1.000 - - - - - - -
28. AGAP2 ENSDARG00000099874 151 1.716 - 1.000 - - 0.716 - - - - ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 [Source:ZFIN;Acc:ZDB-GENE-061103-343]
29. CELF3 CELF3 163 1.713 - 0.898 - - - - 0.815 - -
30. penka ENSDARG00000004869 161 1.711 - 0.991 - - - 0.720 - - - proenkephalin a [Source:ZFIN;Acc:ZDB-GENE-030729-31]
31. PHYH ENSDARG00000086740 15 1.71 - 1.000 - - - 0.710 - - - phytanoyl-CoA 2-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-050417-361]
32. cacng3b ENSDARG00000076401 91 1.71 - 1.000 - - - - - 0.710 - calcium channel, voltage-dependent, gamma subunit 3b [Source:ZFIN;Acc:ZDB-GENE-090828-1]
33. uckl1a ENSDARG00000001686 21 1.702 - 1.000 - - - 0.702 - - - uridine-cytidine kinase 1-like 1a [Source:ZFIN;Acc:ZDB-GENE-040724-238]
34. lhx1a ENSDARG00000014018 958 1.701 - 0.903 - - - 0.798 - - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
35. rbfox3 rbfox3 1443 1.696 - 0.833 - - - 0.863 - - -
36. capn1b ENSDARG00000052748, ENSDARG00000117045 320 1.681 - 0.837 - - - 0.844 - - - calpain 1, (mu/I) large subunit b [Source:ZFIN;Acc:ZDB-GENE-060503-491]
37. Mar-09 Mar-09 126 1.67 - - - - 0.818 0.852 - - -
38. wu:fe36b12 wu:fe36b12 118 1.655 - 0.844 - - - 0.811 - - -
39. tox3 ENSDARG00000073957 3075 1.652 - - - - - 0.763 0.889 - - TOX high mobility group box family member 3 [Source:ZFIN;Acc:ZDB-GENE-090312-209]
40. dbx2 2971 1.641 - 0.781 - - - 0.860 - - - developing brain homeobox 2
41. odz4 odz4 822 1.641 - - - - - 0.886 - 0.755 -
42. KCNB2 ENSDARG00000088842 35 1.639 - 0.806 - - - 0.833 - - - potassium voltage-gated channel subfamily B member 2 [Source:HGNC Symbol;Acc:HGNC:6232]
43. slc12a5b ENSDARG00000078187 329 1.635 - - - - 0.726 0.909 - - - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
44. si:dkey-5i3.5 ENSDARG00000058345, ENSDARG00000110584 60 1.633 0.826 - - - 0.807 - - - - si:dkey-5i3.5 [Source:ZFIN;Acc:ZDB-GENE-070424-162]
45. syt4 ENSDARG00000036505 421 1.629 - 0.815 - - - 0.814 - - - synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297]
46. csf1b ENSDARG00000068263 248 1.619 - 0.714 - - - 0.905 - - - colony stimulating factor 1b (macrophage) [Source:ZFIN;Acc:ZDB-GENE-061215-106]
47. slc1a2b ENSDARG00000102453 3136 1.606 - 0.829 - - - 0.777 - - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
48. si:dkey-253a1.2 si:dkey-253a1.2 52 1.585 - - - - 0.816 0.769 - - -
49. peli1a ENSDARG00000091592 119 1.583 0.739 0.844 - - - - - - - pellino E3 ubiquitin protein ligase 1a [Source:ZFIN;Acc:ZDB-GENE-110310-6]
50. CHL1 CHL1 1553 1.564 - 0.723 - - - 0.841 - - -
51. scn8aa ENSDARG00000005775 792 1.562 - 0.754 - - - 0.808 - - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
52. si:dkey-122c11.9 si:dkey-122c11.9 227 1.557 0.760 - - - - 0.797 - - -
53. lgi2a ENSDARG00000111069 965 1.553 - 0.743 - - - 0.810 - - - leucine-rich repeat LGI family, member 2a [Source:ZFIN;Acc:ZDB-GENE-060217-2]
54. gad2 ENSDARG00000015537 724 1.553 - 0.830 - - - 0.723 - - - glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
55. med18 ENSDARG00000041237 247 1.549 0.774 - - - 0.775 - - - - mediator of RNA polymerase II transcription, subunit 18 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1276]
56. stx1b ENSDARG00000000503 2724 1.544 - 0.814 - - - 0.730 - - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
57. sv2bb ENSDARG00000060711 196 1.536 - 0.822 - - 0.714 - - - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
58. rufy3 ENSDARG00000029692 3031 1.534 - 0.746 - - - 0.788 - - - RUN and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050327-58]
59. nes ENSDARG00000088805 2710 1.532 - 0.770 - - - 0.762 - - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
60. GLRA3 ENSDARG00000011066 242 1.526 - 0.814 - - - 0.712 - - - glycine receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-020402-1]
61. leng1 ENSDARG00000037633 351 1.525 - 0.777 - - 0.748 - - - - leukocyte receptor cluster (LRC) member 1 [Source:ZFIN;Acc:ZDB-GENE-040912-159]
62. draxin ENSDARG00000058256, ENSDARG00000111676 266 1.524 - 0.783 - - - 0.741 - - - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
63. fgf13b ENSDARG00000056633 455 1.519 - - - - - 0.800 0.719 - - fibroblast growth factor 13b [Source:ZFIN;Acc:ZDB-GENE-040426-1793]
64. snap25a ENSDARG00000020609 4537 1.515 - 0.811 - - - 0.704 - - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
65. sall3a ENSDARG00000079613 257 1.514 - - - - - 0.707 0.807 - - spalt-like transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-020228-4]
66. chrnb3a ENSDARG00000052764, ENSDARG00000112769 139 1.503 - - - - 0.794 - - 0.709 - cholinergic receptor, nicotinic, beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040108-1]
67. gpr85 ENSDARG00000068701, ENSDARG00000116501 372 1.502 - 0.788 - - - 0.714 - - - G protein-coupled receptor 85 [Source:ZFIN;Acc:ZDB-GENE-000710-2]
68. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 1.502 - 0.713 - - - 0.789 - - - POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
69. hgfa ENSDARG00000045544 225 1.5 - - - - 0.794 - 0.706 - - hepatocyte growth factor a [Source:ZFIN;Acc:ZDB-GENE-041014-2]
70. hn1a hn1a 115 1.499 - 0.762 - - - 0.737 - - -
71. st3gal2 ENSDARG00000112898 370 1.496 - 0.742 - - - 0.754 - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050419-181]
72. nova2 ENSDARG00000017673 7685 1.485 - 0.708 - - - 0.777 - - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
73. CABZ01048373.1 CABZ01048373.1 81 1.481 - 0.751 - - - 0.730 - - -
74. dlg2 ENSDARG00000099323 162 1.455 0.734 - - - - 0.721 - - - discs, large homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050221-3]
75. adcyap1b ENSDARG00000027740 1539 1.452 - - - - - 0.743 - 0.709 - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
76. iffo1b ENSDARG00000062108 192 1.451 - - - - 0.750 0.701 - - - intermediate filament family orphan 1b [Source:ZFIN;Acc:ZDB-GENE-050208-308]
77. gdf11 ENSDARG00000044924 534 1.45 - - - - 0.717 0.733 - - - growth differentiation factor 11 [Source:ZFIN;Acc:ZDB-GENE-040427-2]
78. hspbap1 ENSDARG00000033771 41 1 - 1.000 - - - - - - - hspb associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040808-38]
79. mfsd4a mfsd4a 179 1 - 1.000 - - - - - - -
80. crispld1a ENSDARG00000077275 7 1 - 1.000 - - - - - - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
81. zgc:113691 ENSDARG00000038898 36 1 - 1.000 - - - - - - - zgc:113691 [Source:ZFIN;Acc:ZDB-GENE-050220-7]
82. si:dkey-102c8.2 ENSDARG00000058537, ENSDARG00000112361 3 1 - 1.000 - - - - - - - si:dkey-102c8.2 [Source:ZFIN;Acc:ZDB-GENE-050208-329]
83. sirt7 ENSDARG00000060645 1 1 - 1.000 - - - - - - - sirtuin 7 [Source:ZFIN;Acc:ZDB-GENE-050208-612]
84. si:dkey-49o11.1 0 1 - 1.000 - - - - - - - si:dkey-49o11.1
85. bdnf ENSDARG00000018817 193 1 - 1.000 - - - - - - - brain-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-000412-1]
86. si:dkey-32n7.7 ENSDARG00000063444 4 1 - 1.000 - - - - - - - si:dkey-32n7.7 [Source:ZFIN;Acc:ZDB-GENE-121214-179]
87. tmigd1 ENSDARG00000007040 19 1 - 1.000 - - - - - - - transmembrane and immunoglobulin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-080303-6]
88. si:ch211-42i9.10 si:ch211-42i9.10 25 1 - 1.000 - - - - - - -
89. calb1 ENSDARG00000031598 252 1 - 1.000 - - - - - - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
90. gria4b ENSDARG00000059368, ENSDARG00000114212, ENSDARG00000115594 255 1 - 1.000 - - - - - - - glutamate receptor, ionotropic, AMPA 4b [Source:ZFIN;Acc:ZDB-GENE-030131-8013]
91. pif1 ENSDARG00000020289 216 1 - 1.000 - - - - - - - PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4928]
92. TUBB2A TUBB2A 142 1 - 1.000 - - - - - - -
93. igfbp5a ENSDARG00000039264, ENSDARG00000111203 117 1 - 1.000 - - - - - - - insulin-like growth factor binding protein 5a [Source:ZFIN;Acc:ZDB-GENE-070620-8]
94. zgc:153654 ENSDARG00000060322 9 1 - 1.000 - - - - - - - zgc:153654 [Source:ZFIN;Acc:ZDB-GENE-060929-1102]
95. arl11l arl11l 31 1 - 1.000 - - - - - - -
96. zeb2b ENSDARG00000078416 23 1 - 1.000 - - - - - - - zinc finger E-box binding homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080717-1]
97. otpb ENSDARG00000058379 1143 1 - 1.000 - - - - - - - orthopedia homeobox b [Source:ZFIN;Acc:ZDB-GENE-990708-7]
98. mir184 48 1 - 1.000 - - - - - - - microRNA 184
99. MCF2L2 ENSDARG00000079742 52 1 - 1.000 - - - - - - - MCF.2 cell line derived transforming sequence-like 2 [Source:ZFIN;Acc:ZDB-GENE-100812-1]
100. CU571323.1 CU571323.1 7 1 - 1.000 - - - - - - -

There are 1229 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA