Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for khdrbs1b

Gene Name Gene ID Reads Annotation
khdrbs1b ENSDARG00000070475 18157 KH domain containing, RNA binding, signal transduction associated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2344]










Genes with expression patterns similar to khdrbs1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. khdrbs1b ENSDARG00000070475 18157 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 KH domain containing, RNA binding, signal transduction associated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2344]
2. elavl1 11672 2.874 - 0.987 - - - - 0.996 0.891 - ELAV like RNA binding protein 1, transcript variant X3
3. mcm5 ENSDARG00000019507 6407 2.435 - - - 0.700 - - 0.996 0.739 - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
4. oaz1b ENSDARG00000104782 37623 2.419 - 0.853 - - - - 0.855 - 0.711 ornithine decarboxylase antizyme 1b [Source:ZFIN;Acc:ZDB-GENE-020731-5]
5. PROSER1 ENSDARG00000086302 1935 2.412 - - - 0.706 - 0.857 - 0.849 - proline and serine rich 1 [Source:ZFIN;Acc:ZDB-GENE-111003-1]
6. snrpf ENSDARG00000105037 10241 2.182 0.711 - - 0.720 - - - 0.751 - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
7. eif5 ENSDARG00000003681 7986 1.968 - 0.979 - - - - 0.989 - - eukaryotic translation initiation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030131-975]
8. cox7a2a ENSDARG00000053217 12564 1.937 - 0.955 - - - - 0.982 - - cytochrome c oxidase subunit 7A2a [Source:ZFIN;Acc:ZDB-GENE-050522-153]
9. odc1 ENSDARG00000007377 8957 1.906 - - - - - 0.920 - - 0.986 ornithine decarboxylase 1 [Source:ZFIN;Acc:ZDB-GENE-010816-1]
10. tia1l ENSDARG00000026476, ENSDARG00000109827 9378 1.888 - - - - - 0.892 0.996 - - cytotoxic granule-associated RNA binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2167]
11. amotl2a ENSDARG00000061923 4713 1.866 - - - - - 0.883 - - 0.983 angiomotin like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-9770]
12. ube2v1 ENSDARG00000041875 5739 1.864 - 0.981 - - - 0.883 - - - ubiquitin-conjugating enzyme E2 variant 1 [Source:ZFIN;Acc:ZDB-GENE-051030-102]
13. rab5aa ENSDARG00000018602 8947 1.853 - 0.976 - - 0.877 - - - - RAB5A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-030131-139]
14. cdh2 ENSDARG00000018693, ENSDARG00000117201 9869 1.845 - - 0.975 - - 0.870 - - - cadherin 2, type 1, N-cadherin (neuronal) [Source:ZFIN;Acc:ZDB-GENE-990415-171]
15. rbfox2 ENSDARG00000052182 6621 1.842 - - - - - 0.853 0.989 - - RNA binding fox-1 homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2464]
16. flot2b ENSDARG00000069774 2831 1.837 - - - - - 0.858 - - 0.979 flotillin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1368]
17. bckdha ENSDARG00000040555, ENSDARG00000111762 7620 1.837 - 0.972 - - - 0.865 - - - branched chain keto acid dehydrogenase E1, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-050522-376]
18. lamb2 ENSDARG00000002084 3265 1.832 - - - - - 0.846 0.986 - - laminin, beta 2 (laminin S) [Source:ZFIN;Acc:ZDB-GENE-081030-4]
19. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 1.828 - 0.980 - - - - - 0.848 - zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
20. sec63 ENSDARG00000017740 3789 1.825 - - - - - 0.844 - - 0.981 SEC63 homolog, protein translocation regulator [Source:ZFIN;Acc:ZDB-GENE-040718-328]
21. plagx ENSDARG00000036855 3768 1.817 - 0.975 - - - 0.842 - - - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
22. pbxip1b ENSDARG00000011824 3726 1.81 - 0.965 - - - 0.845 - - - pre-B-cell leukemia homeobox interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2032]
23. ap2b1 ENSDARG00000035152 2912 1.793 - 0.979 - - - - - 0.814 - adaptor related protein complex 2 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6564]
24. ddx6 ENSDARG00000061338 2514 1.766 - 0.982 - - - - - 0.784 - DEAD (Asp-Glu-Ala-Asp) box helicase 6 [Source:ZFIN;Acc:ZDB-GENE-070912-83]
25. arhgap1 ENSDARG00000024324 6904 1.742 - - 0.987 - - - - 0.755 - Rho GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-305]
26. gcn1l1 gcn1l1 6031 1.733 - 0.846 - - - 0.887 - - -
27. pds5a ENSDARG00000055022, ENSDARG00000115793 3842 1.729 - - - 0.744 - - - - 0.985 PDS5 cohesin associated factor A [Source:ZFIN;Acc:ZDB-GENE-040426-1612]
28. frem2a ENSDARG00000076856 11022 1.721 - 0.817 - - - 0.904 - - - Fras1 related extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-081119-3]
29. hnrnph1l ENSDARG00000005551 8727 1.698 - - - - 0.718 - 0.980 - - heterogeneous nuclear ribonucleoprotein H1, like [Source:ZFIN;Acc:ZDB-GENE-030131-275]
30. alyref ENSDARG00000077732 25934 1.696 0.745 - - - - - - - 0.951 Aly/REF export factor [Source:ZFIN;Acc:ZDB-GENE-070928-29]
31. tra2a ENSDARG00000007863 4449 1.693 - 0.973 - - - - - 0.720 - transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]
32. eif4g2a ENSDARG00000020377, ENSDARG00000112658 6895 1.688 - 0.982 - 0.706 - - - - - eukaryotic translation initiation factor 4, gamma 2a [Source:ZFIN;Acc:ZDB-GENE-030131-2173]
33. ywhabb ENSDARG00000075758 23104 1.684 - - 0.948 - 0.736 - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide b [Source:ZFIN;Acc:ZDB-GENE-040426-2160]
34. MAF1 ENSDARG00000013122 6899 1.684 - 0.981 - 0.703 - - - - - MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
35. eif3c ENSDARG00000016443 18003 1.68 0.703 - - - - - - - 0.977 eukaryotic translation initiation factor 3, subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-6166]
36. znf865 ENSDARG00000036698 15532 1.68 - - 0.948 0.732 - - - - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
37. tgif1 ENSDARG00000059337 4020 1.663 - - - - 0.869 - - 0.794 - TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
38. cdc42 ENSDARG00000044573 11795 1.651 - - - - - 0.942 - 0.709 - cell division cycle 42 [Source:ZFIN;Acc:ZDB-GENE-030131-8783]
39. id3 ENSDARG00000054823 3484 1.629 - 0.887 - - - - - 0.742 - inhibitor of DNA binding 3 [Source:ZFIN;Acc:ZDB-GENE-020515-1]
40. rpl17 ENSDARG00000057556 60281 1.615 - 0.701 - - - - 0.914 - - ribosomal protein L17 [Source:ZFIN;Acc:ZDB-GENE-030131-8585]
41. rps17 ENSDARG00000104011 27028 1.601 - - - - 0.753 0.848 - - - ribosomal protein S17 [Source:ZFIN;Acc:ZDB-GENE-040426-1852]
42. seta ENSDARG00000031495 39977 1.589 - 0.775 - - - - - 0.814 - SET nuclear proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-030131-2221]
43. rasgef1ba ENSDARG00000033614, ENSDARG00000116057 4860 1.586 - - - - - 0.870 - 0.716 - RasGEF domain family, member 1Ba [Source:ZFIN;Acc:ZDB-GENE-030131-5783]
44. CASKIN2_1 CASKIN2_1 2299 1.583 - - - - - 0.859 - 0.724 -
45. wu:fc51f04 wu:fc51f04 7074 1.58 - - - 0.725 - 0.855 - - -
46. prp19 prp19 4804 1.577 - - - 0.749 - - - 0.828 -
47. bzw1a ENSDARG00000010481 28451 1.562 0.823 - - - - - - 0.739 - basic leucine zipper and W2 domains 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3951]
48. snrpc ENSDARG00000009871 9567 1.554 - - - 0.724 - 0.830 - - - small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
49. kpnb1 ENSDARG00000104889 9282 1.544 - - - 0.744 - - - 0.800 - karyopherin (importin) beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2579]
50. top1l ENSDARG00000070545 40529 1.541 - - - 0.703 - 0.838 - - - DNA topoisomerase I, like [Source:ZFIN;Acc:ZDB-GENE-060616-217]
51. nfe2l2a ENSDARG00000042824 1707 1.535 - - - - - 0.830 - 0.705 - nuclear factor, erythroid 2-like 2a [Source:ZFIN;Acc:ZDB-GENE-030723-2]
52. psmb6 ENSDARG00000002240 8015 1.527 0.745 - - - - - - 0.782 - proteasome subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216]
53. cnih cnih 8292 1.498 0.705 - - - - - - 0.793 -
54. eif4a3 ENSDARG00000102978 16162 1.473 - - - 0.705 - - - 0.768 - eukaryotic translation initiation factor 4A3 [Source:ZFIN;Acc:ZDB-GENE-040426-915]
55. rps5 ENSDARG00000043453 91085 1.472 - - 0.747 - 0.725 - - - - ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
56. stmn1a ENSDARG00000004169 21169 1.462 0.722 - - - 0.740 - - - - stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
57. HNRNPA2B1 HNRNPA2B1 14997 1.461 0.740 - - 0.721 - - - - -
58. tuba8l ENSDARG00000042708 48551 1.451 - - - 0.750 - - - 0.701 - tubulin, alpha 8 like [Source:ZFIN;Acc:ZDB-GENE-030131-9167]
59. srsf5a ENSDARG00000029818 15600 1.451 0.748 - - - - - - - 0.703 serine/arginine-rich splicing factor 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7336]
60. cdca7a ENSDARG00000077620 9345 1.442 0.737 - - 0.705 - - - - - cell division cycle associated 7a [Source:ZFIN;Acc:ZDB-GENE-050417-29]
61. etf1 etf1 12861 1.421 - - - 0.703 0.718 - - - -
62. smo ENSDARG00000002952 6411 0.997 - - 0.997 - - - - - - smoothened, frizzled class receptor [Source:ZFIN;Acc:ZDB-GENE-980526-89]
63. gpt2l ENSDARG00000019541 3397 0.996 - - - - - - 0.996 - - glutamic pyruvate transaminase (alanine aminotransferase) 2, like [Source:ZFIN;Acc:ZDB-GENE-050302-11]
64. gart ENSDARG00000101089 6062 0.996 - - - - - - 0.996 - - phosphoribosylglycinamide formyltransferase [Source:ZFIN;Acc:ZDB-GENE-000616-14]
65. zgc:92066 ENSDARG00000031776, ENSDARG00000116586 12826 0.996 - - - - - - 0.996 - - zgc:92066 [Source:ZFIN;Acc:ZDB-GENE-040718-72]
66. thrap3b ENSDARG00000098228 4396 0.995 - - - - - - 0.995 - - thyroid hormone receptor associated protein 3b [Source:ZFIN;Acc:ZDB-GENE-040516-9]
67. psmb3 ENSDARG00000013938 10744 0.995 - - - - - - 0.995 - - proteasome subunit beta 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2682]
68. hoxc6a ENSDARG00000070343 2839 0.994 - - - - - - 0.994 - - homeobox C6a [Source:ZFIN;Acc:ZDB-GENE-990415-113]
69. ash2l ENSDARG00000060392 4916 0.994 - - 0.994 - - - - - - ash2 like, histone lysine methyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-494]
70. mrpl12 ENSDARG00000038768 5539 0.993 - - 0.993 - - - - - - mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
71. yap1 ENSDARG00000068401, ENSDARG00000112952 16365 0.993 - - 0.993 - - - - - - Yes-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9710]
72. pdia3 ENSDARG00000102640 7239 0.993 - - 0.993 - - - - - - protein disulfide isomerase family A, member 3 [Source:ZFIN;Acc:ZDB-GENE-031002-9]
73. tfdp1b ENSDARG00000016304 3071 0.993 - - 0.993 - - - - - - transcription factor Dp-1, b [Source:ZFIN;Acc:ZDB-GENE-040426-1746]
74. srsf3b ENSDARG00000059360 14888 0.993 - - 0.993 - - - - - - serine/arginine-rich splicing factor 3b [Source:ZFIN;Acc:ZDB-GENE-071005-2]
75. cops2 ENSDARG00000004785 4911 0.993 - - 0.993 - - - - - - COP9 signalosome subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-15]
76. eif2ak3 ENSDARG00000062139 3276 0.992 - - 0.992 - - - - - - eukaryotic translation initiation factor 2-alpha kinase 3 [Source:ZFIN;Acc:ZDB-GENE-050414-2]
77. CABZ01029822.1 ENSDARG00000086931 1654 0.992 - - 0.992 - - - - - - uncharacterized LOC100004582 [Source:NCBI gene;Acc:100004582]
78. ik ENSDARG00000004161 3132 0.992 - - 0.992 - - - - - - IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
79. lamtor2 ENSDARG00000039872 3250 0.992 - - 0.992 - - - - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 [Source:ZFIN;Acc:ZDB-GENE-040801-63]
80. mpz ENSDARG00000038609 1740 0.992 - - 0.992 - - - - - - myelin protein zero [Source:ZFIN;Acc:ZDB-GENE-010724-4]
81. abi2a ENSDARG00000058207, ENSDARG00000111927 2574 0.992 - - 0.992 - - - - - - abl-interactor 2a [Source:ZFIN;Acc:ZDB-GENE-060929-192]
82. commd4 ENSDARG00000061946 3281 0.992 - - 0.992 - - - - - - COMM domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-600]
83. smarcal1 ENSDARG00000102265 1921 0.992 - - 0.992 - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [Source:ZFIN;Acc:ZDB-GENE-041210-303]
84. blzf1 ENSDARG00000011299 2568 0.992 - - 0.992 - - - - - - basic leucine zipper nuclear factor 1 [Source:ZFIN;Acc:ZDB-GENE-010724-1]
85. si:dkey-177p2.6 ENSDARG00000042322 2783 0.992 - - 0.992 - - - - - - si:dkey-177p2.6 [Source:ZFIN;Acc:ZDB-GENE-030131-5926]
86. toporsb ENSDARG00000105028 1898 0.992 - - 0.992 - - - - - - topoisomerase I binding, arginine/serine-rich b [Source:ZFIN;Acc:ZDB-GENE-110728-3]
87. NSMCE2 ENSDARG00000076379 2133 0.992 - - 0.992 - - - - - - NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase [Source:ZFIN;Acc:ZDB-GENE-081022-128]
88. HPCAL1 ENSDARG00000022763 2885 0.992 - - 0.992 - - - - - - hippocalcin-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1242]
89. glrx ENSDARG00000028106 16225 0.992 - - 0.992 - - - - - - glutaredoxin (thioltransferase) [Source:ZFIN;Acc:ZDB-GENE-041010-11]
90. timmdc1 ENSDARG00000053466 2179 0.992 - - 0.992 - - - - - - translocase of inner mitochondrial membrane domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-369]
91. hmga2 ENSDARG00000069912 20402 0.991 - - 0.991 - - - - - - high mobility group AT-hook 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3148]
92. eif4ebp1 ENSDARG00000043608, ENSDARG00000113927 9982 0.991 - - 0.991 - - - - - - eukaryotic translation initiation factor 4E binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2332]
93. thoc2 ENSDARG00000037503 8711 0.991 - 0.991 - - - - - - - THO complex 2 [Source:ZFIN;Acc:ZDB-GENE-030616-54]
94. mef2d ENSDARG00000040237 6144 0.991 - - 0.991 - - - - - - myocyte enhancer factor 2d [Source:ZFIN;Acc:ZDB-GENE-990415-164]
95. vtna ENSDARG00000055388 2635 0.991 - - - - - - 0.991 - - vitronectin a [Source:ZFIN;Acc:ZDB-GENE-050522-440]
96. ndufb11 ENSDARG00000043467 7495 0.991 - 0.991 - - - - - - - NADH:ubiquinone oxidoreductase subunit B11 [Source:ZFIN;Acc:ZDB-GENE-050309-25]
97. bdh1 ENSDARG00000059388 3390 0.991 - - 0.991 - - - - - - 3-hydroxybutyrate dehydrogenase, type 1 [Source:ZFIN;Acc:ZDB-GENE-070410-130]
98. kazald2 ENSDARG00000078518 3062 0.991 - - 0.991 - - - - - - Kazal-type serine peptidase inhibitor domain 2 [Source:ZFIN;Acc:ZDB-GENE-070928-14]
99. fbn2b ENSDARG00000098237 10835 0.99 - - 0.990 - - - - - - fibrillin 2b [Source:ZFIN;Acc:ZDB-GENE-090112-3]
100. si:ch73-138n13.1 ENSDARG00000075349 4411 0.99 - - 0.990 - - - - - - si:ch73-138n13.1 [Source:ZFIN;Acc:ZDB-GENE-091204-448]

There are 767 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA