Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for khdrbs1a

Gene Name Gene ID Reads Annotation
khdrbs1a ENSDARG00000052856 53666 KH domain containing, RNA binding, signal transduction associated 1a [Source:ZFIN;Acc:ZDB-GENE-000210-25]










Genes with expression patterns similar to khdrbs1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. khdrbs1a ENSDARG00000052856 53666 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 KH domain containing, RNA binding, signal transduction associated 1a [Source:ZFIN;Acc:ZDB-GENE-000210-25]
2. cx43.4 ENSDARG00000007099 16369 3.25 0.740 - - 0.821 - - 0.972 0.717 - connexin 43.4 [Source:ZFIN;Acc:ZDB-GENE-990415-38]
3. si:dkeyp-86f7.3 si:dkeyp-86f7.3 92941 3.09 0.814 - - - - - 0.746 0.806 0.724
4. top1l ENSDARG00000070545 40529 2.599 - - 0.819 - - 0.921 - 0.859 - DNA topoisomerase I, like [Source:ZFIN;Acc:ZDB-GENE-060616-217]
5. pcdh1gc5 ENSDARG00000104826 10052 2.522 0.881 - - - - - - 0.831 0.810 protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
6. tomm20b ENSDARG00000103566 12436 2.498 0.737 0.798 - - - - 0.963 - - translocase of outer mitochondrial membrane 20b [Source:ZFIN;Acc:ZDB-GENE-040718-451]
7. eif3c ENSDARG00000016443 18003 2.411 0.707 - - 0.728 - - 0.976 - - eukaryotic translation initiation factor 3, subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-6166]
8. hmgb1b ENSDARG00000030479 10398 2.388 0.806 - - - 0.788 - - 0.794 - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
9. h3f3a 66671 2.325 0.789 - - 0.776 - - - 0.760 - H3 histone, family 3A, transcript variant X1
10. khsrp ENSDARG00000026489 15738 2.278 0.801 - 0.756 - - - - 0.721 - KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
11. bzw1a ENSDARG00000010481 28451 2.234 0.745 - - 0.786 - - - 0.703 - basic leucine zipper and W2 domains 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3951]
12. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 2.231 0.746 - - - - - - 0.738 0.747 HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
13. hmgb2b ENSDARG00000053990 11519 2.18 0.757 - - - - 0.710 - 0.713 - high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]
14. srsf5a ENSDARG00000029818 15600 1.797 0.827 - - - - - 0.970 - - serine/arginine-rich splicing factor 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7336]
15. parp1 ENSDARG00000019529 6787 1.78 0.811 - - - - - 0.969 - - poly (ADP-ribose) polymerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3955]
16. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 72444 1.775 0.848 - - - - - - 0.927 - heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
17. hoxb8a ENSDARG00000056027 6340 1.772 0.800 - - - - - 0.972 - - homeobox B8a [Source:ZFIN;Acc:ZDB-GENE-990415-108]
18. ENDOD1_5 ENDOD1_5 8723 1.754 0.942 - - - - - - 0.812 -
19. PCDH9 ENSDARG00000063264 1309 1.741 0.778 - - - - - 0.963 - - protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1]
20. tmem35 ENSDARG00000052567 5685 1.729 0.810 - - - - - - 0.919 - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
21. CT955967.1 ENSDARG00000099956 2885 1.727 - - - - - - 0.965 0.762 -
22. nr2f1a ENSDARG00000052695 5037 1.726 0.768 - - - - - 0.958 - - nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
23. hnrnpab hnrnpab 72354 1.716 0.788 - - - - - - 0.928 -
24. prmt1 ENSDARG00000010246 11311 1.704 0.894 - - - - - - 0.810 - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
25. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 1.699 0.869 - - - - - - 0.830 - methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
26. rpl32 ENSDARG00000054818, ENSDARG00000110237, ENSDARG00000115707 37036 1.693 0.720 - - - - - 0.973 - - ribosomal protein L32 [Source:ZFIN;Acc:ZDB-GENE-060331-105]
27. fam60al 2846 1.667 0.857 - - - - - - 0.810 - family with sequence similarity 60, member A, like
28. stmn1b ENSDARG00000033655 9491 1.666 0.821 - - - - - - 0.845 - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
29. tox ENSDARG00000032317 9126 1.664 0.801 - - - - - - 0.863 - thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
30. ldb3b ENSDARG00000099974 33615 1.662 - 0.851 - - - - 0.811 - - LIM domain binding 3b [Source:ZFIN;Acc:ZDB-GENE-030131-6032]
31. hmgb3a ENSDARG00000056725 15668 1.657 0.948 - - - - 0.709 - - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
32. tle2 5014 1.654 0.849 - - - - - - 0.805 - transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila), transcript variant X4
33. cirbp cirbp 88363 1.652 - - - - - - - 0.833 0.819
34. elof1 ENSDARG00000099453 6176 1.651 0.763 - - - - - - 0.888 - ELF1 homolog, elongation factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1385]
35. id1 ENSDARG00000040764 112601 1.642 0.840 - - 0.802 - - - - - inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
36. nrarpb ENSDARG00000018958 6225 1.642 0.758 - - - - - - 0.884 - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
37. hdac1 ENSDARG00000015427 19804 1.639 0.891 - - - - - - 0.748 - histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
38. uhrf1 ENSDARG00000103409 3282 1.639 0.824 - - - - - - 0.815 - ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
39. srsf1a ENSDARG00000057691, ENSDARG00000111226 15525 1.636 - - - - 0.864 - - 0.772 - serine/arginine-rich splicing factor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1950]
40. hnrnpub ENSDARG00000004735 16496 1.635 0.865 - - - - - - 0.770 - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
41. clstn1 ENSDARG00000031720 5286 1.634 0.833 - - - - - - 0.801 - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
42. wu:fk48d07 wu:fk48d07 13245 1.631 0.845 - - - 0.786 - - - -
43. stmn1a ENSDARG00000004169 21169 1.628 0.835 - - - - - - 0.793 - stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
44. eif5a2 ENSDARG00000056186 43804 1.618 - - - 0.874 - - - 0.744 - eukaryotic translation initiation factor 5A2 [Source:ZFIN;Acc:ZDB-GENE-040426-2405]
45. dla ENSDARG00000010791 9281 1.616 0.867 - 0.749 - - - - - - deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
46. hnrnpa0a ENSDARG00000089302 45675 1.611 0.851 - - - - - - 0.760 - heterogeneous nuclear ribonucleoprotein A0a [Source:ZFIN;Acc:ZDB-GENE-030131-2249]
47. ptmab ENSDARG00000101766 182812 1.61 0.761 - - - - - - 0.849 - prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
48. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 1.609 0.848 - - - - - - 0.761 - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
49. whsc1l1 8544 1.607 0.716 - - - - - - 0.891 - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
50. AGO1 ENSDARG00000092644 4521 1.602 0.882 - - - - - - 0.720 - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
51. rplp0 ENSDARG00000051783 88740 1.598 0.771 - - - - - 0.827 - - ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
52. dpysl5a ENSDARG00000011141 1827 1.598 0.830 - - - - - - 0.768 - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
53. zswim5 ENSDARG00000055900 4243 1.597 0.785 - - - - - - 0.812 - zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
54. cdh2 ENSDARG00000018693, ENSDARG00000117201 9869 1.595 0.858 - - - - 0.737 - - - cadherin 2, type 1, N-cadherin (neuronal) [Source:ZFIN;Acc:ZDB-GENE-990415-171]
55. zgc:112425 zgc:112425 293873 1.587 - - 0.719 - - - - 0.868 -
56. tmpob ENSDARG00000022978 8121 1.585 0.812 - - - - - - 0.773 - thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
57. nova2 ENSDARG00000017673 7685 1.584 0.844 - - - 0.740 - - - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
58. zgc:77086 ENSDARG00000014015 4908 1.58 0.846 - - - - - - - 0.734 zgc:77086 [Source:ZFIN;Acc:ZDB-GENE-040426-2238]
59. apex1 ENSDARG00000045843 6345 1.579 0.773 - - - - - - 0.806 - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
60. marcksl1a ENSDARG00000039034 37303 1.578 - - - - - 0.816 - 0.762 - MARCKS-like 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2146]
61. cspg5a ENSDARG00000069981 1699 1.575 0.797 - - - - - - 0.778 - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
62. nono ENSDARG00000020482, ENSDARG00000115783 12482 1.573 0.712 - - - - - - 0.861 - non-POU domain containing, octamer-binding [Source:ZFIN;Acc:ZDB-GENE-030131-713]
63. mllt11 ENSDARG00000071026 2518 1.569 0.827 - - - - - - 0.742 - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
64. stip1 ENSDARG00000004906 7742 1.568 0.738 0.830 - - - - - - - stress-induced phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-041121-17]
65. MKI67 ENSDARG00000091150 11038 1.561 0.802 - - - 0.759 - - - - marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
66. slbp ENSDARG00000100558 3405 1.56 0.729 - - - - - - 0.831 - stem-loop binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9686]
67. ilf2 ENSDARG00000014591 14543 1.557 0.806 - - - - - - 0.751 - interleukin enhancer binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2345]
68. hmga1a ENSDARG00000028335 254077 1.553 0.768 - 0.785 - - - - - - high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
69. kdm1a ENSDARG00000060679 6152 1.553 0.781 - - - - - - 0.772 - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
70. rrm1 ENSDARG00000014017 7296 1.551 0.798 - - - 0.753 - - - - ribonucleotide reductase M1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-247]
71. sox3 ENSDARG00000053569 12016 1.55 0.839 - - - - - - 0.711 - SRY (sex determining region Y)-box 3 [Source:ZFIN;Acc:ZDB-GENE-980526-333]
72. h2afvb ENSDARG00000116491 35692 1.549 0.821 - - - - - - 0.728 - H2A histone family, member Vb [Source:ZFIN;Acc:ZDB-GENE-050506-24]
73. marcksb ENSDARG00000008803 42949 1.544 - - - - - 0.710 - 0.834 - myristoylated alanine-rich protein kinase C substrate b [Source:ZFIN;Acc:ZDB-GENE-030131-1921]
74. rps27.1 ENSDARG00000023298 86382 1.543 0.767 - - - - - - - 0.776 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
75. ZFHX3 ENSDARG00000103057 7759 1.541 0.809 - - - 0.732 - - - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
76. sae1 ENSDARG00000010487 2028 1.54 0.793 - - - - - - 0.747 - SUMO1 activating enzyme subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040625-21]
77. pfn2l ENSDARG00000012682 21690 1.535 0.832 - - - - - - 0.703 - profilin 2 like [Source:ZFIN;Acc:ZDB-GENE-030131-34]
78. snrpd2 ENSDARG00000040440, ENSDARG00000110285 4301 1.533 0.778 - - - - - - 0.755 - small nuclear ribonucleoprotein D2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040914-10]
79. fbxo11a_1 ENSDARG00000061631, ENSDARG00000102294, ENSDARG00000112746 10566 1.532 0.822 - - - - - - 0.710 - F-box protein 11a [Source:ZFIN;Acc:ZDB-GENE-061103-70]
80. tubb5 ENSDARG00000037997 18691 1.528 0.809 - 0.719 - - - - - - tubulin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-031110-4]
81. hes6 ENSDARG00000019335 4754 1.525 0.751 - - - - - - 0.774 - hes family bHLH transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-030828-5]
82. eif3s6ip ENSDARG00000101082 18515 1.524 0.813 - - - - - - - 0.711 eukaryotic translation initiation factor 3, subunit 6 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-2138]
83. snrpf ENSDARG00000105037 10241 1.523 0.770 - - - 0.753 - - - - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
84. fubp1 ENSDARG00000029248 15259 1.52 - - - - 0.755 - - 0.765 - far upstream element (FUSE) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2159]
85. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 1.513 0.728 - - - - - - 0.785 - POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
86. foxp4 ENSDARG00000076120 9458 1.509 0.803 - - 0.706 - - - - - forkhead box P4 [Source:ZFIN;Acc:ZDB-GENE-101207-1]
87. ppm1g ENSDARG00000075559 6516 1.506 0.759 - 0.747 - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1G [Source:ZFIN;Acc:ZDB-GENE-030425-4]
88. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 1.5 0.789 - - - - - - 0.711 - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
89. CR936437.1 CR936437.1 6465 1.498 0.792 - - - - - - 0.706 -
90. dlb ENSDARG00000004232 5120 1.495 0.744 - - - - - - 0.751 - deltaB [Source:ZFIN;Acc:ZDB-GENE-980526-114]
91. dkc1 ENSDARG00000016484 7088 1.493 - 0.785 - - 0.708 - - - - dyskeratosis congenita 1, dyskerin [Source:ZFIN;Acc:ZDB-GENE-031118-120]
92. CABZ01028296.1 CABZ01028296.1 6203 1.491 0.783 - - - - - - 0.708 -
93. fyna ENSDARG00000011370 1679 1.49 0.729 - - - - - - 0.761 - FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
94. inab ENSDARG00000053248 3239 1.489 0.729 - - - - - - 0.760 - internexin neuronal intermediate filament protein, alpha b [Source:ZFIN;Acc:ZDB-GENE-990415-83]
95. eif4a3 ENSDARG00000102978 16162 1.483 0.754 - - - - - - 0.729 - eukaryotic translation initiation factor 4A3 [Source:ZFIN;Acc:ZDB-GENE-040426-915]
96. alyref ENSDARG00000077732 25934 1.476 0.760 - 0.716 - - - - - - Aly/REF export factor [Source:ZFIN;Acc:ZDB-GENE-070928-29]
97. eif2s3 ENSDARG00000008292 17051 1.475 0.771 - - - 0.704 - - - - eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
98. ssbp4 ENSDARG00000056483 10196 1.471 0.748 - - - - - - 0.723 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
99. lsm6 ENSDARG00000036995 4377 1.469 0.763 - - - - - - 0.706 - LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040625-50]
100. CABZ01028287.1 CABZ01028287.1 626 1.466 0.703 - - - - - - 0.763 -

There are 756 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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