Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for kdm5c

Gene Name Gene ID Reads Annotation
kdm5c ENSDARG00000006124 4389 lysine (K)-specific demethylase 5C [Source:ZFIN;Acc:ZDB-GENE-060810-94]










Genes with expression patterns similar to kdm5c

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. kdm5c ENSDARG00000006124 4389 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 lysine (K)-specific demethylase 5C [Source:ZFIN;Acc:ZDB-GENE-060810-94]
2. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 3.963 - 0.720 0.864 0.738 - 0.823 - - 0.818 ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
3. zswim5 ENSDARG00000055900 4243 3.174 - - 0.895 - 0.766 0.774 - - 0.739 zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
4. cul4b ENSDARG00000060510 6053 3.155 - - - - 0.833 0.743 0.707 - 0.872 cullin 4B [Source:ZFIN;Acc:ZDB-GENE-041008-208]
5. phf10 ENSDARG00000070084 1210 3.106 - 0.745 0.862 - - 0.741 - - 0.758 PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
6. rtf1 ENSDARG00000008947 6596 2.498 - - 0.830 - 0.928 0.740 - - - RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
7. cand1 ENSDARG00000017841 8164 2.486 - - 0.852 - - 0.761 0.873 - - cullin-associated and neddylation-dissociated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2872]
8. TNRC6B ENSDARG00000074161 2464 2.47 - 0.712 - - 0.937 - - - 0.821 trinucleotide repeat containing 6b [Source:ZFIN;Acc:ZDB-GENE-030131-13]
9. CABZ01087568.1 CABZ01087568.1 1487 2.468 - - 0.849 - 0.886 - - - 0.733
10. lypla2 ENSDARG00000053656 8971 2.462 - 0.825 0.864 - - 0.773 - - - lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
11. setdb1b ENSDARG00000099021 2937 2.441 - - 0.890 - - 0.711 - - 0.840 SET domain, bifurcated 1b [Source:ZFIN;Acc:ZDB-GENE-061013-224]
12. pum1 ENSDARG00000099256 5017 2.416 - 0.734 0.914 - - 0.768 - - - pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074]
13. sin3ab ENSDARG00000059812 2140 2.391 - - - - 0.933 0.721 0.737 - - SIN3 transcription regulator family member Ab [Source:ZFIN;Acc:ZDB-GENE-030131-2066]
14. rae1 ENSDARG00000007196, ENSDARG00000113905 3321 2.383 - - - - 0.845 0.730 0.808 - - ribonucleic acid export 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1029]
15. cpsf1 ENSDARG00000034178 2036 2.373 - - 0.858 - - 0.750 - - 0.765 cleavage and polyadenylation specific factor 1 [Source:ZFIN;Acc:ZDB-GENE-040709-2]
16. zgc:113348 ENSDARG00000103795 1351 2.37 - - 0.868 - - 0.787 - - 0.715 zgc:113348 [Source:ZFIN;Acc:ZDB-GENE-050227-10]
17. brd2a ENSDARG00000022280 3481 2.358 - 0.870 - - - 0.704 - - 0.784 bromodomain containing 2a [Source:ZFIN;Acc:ZDB-GENE-990415-248]
18. camlg ENSDARG00000100409 2157 2.357 - - - - 0.878 0.735 0.744 - - calcium modulating ligand [Source:ZFIN;Acc:ZDB-GENE-040426-2407]
19. htatsf1 ENSDARG00000056649 2018 2.351 - 0.761 0.882 - - 0.708 - - - HIV-1 Tat specific factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1578]
20. mta2 ENSDARG00000013031 2932 2.342 - 0.789 - - - - - 0.750 0.803 metastasis associated 1 family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4803]
21. arglu1a ENSDARG00000019223 8716 2.342 - 0.705 - - - 0.858 0.779 - - arginine and glutamate rich 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2914]
22. rgl1 ENSDARG00000005989, ENSDARG00000114367 2501 2.337 - 0.733 - - - 0.793 - - 0.811 ral guanine nucleotide dissociation stimulator-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1816]
23. hnrnpd ENSDARG00000059246, ENSDARG00000109297, ENSDARG00000113453 3440 2.313 - - 0.821 - 0.785 - - - 0.707 heterogeneous nuclear ribonucleoprotein D [Source:ZFIN;Acc:ZDB-GENE-070424-97]
24. C10H11orf30 C10H11orf30 1982 2.301 - 0.735 0.858 - - - - 0.708 -
25. si:ch211-161h7.4 ENSDARG00000087238 4399 2.287 - - 0.854 - - 0.713 0.720 - - si:ch211-161h7.4 [Source:ZFIN;Acc:ZDB-GENE-091118-108]
26. drg1 ENSDARG00000039345 7545 2.268 - - 0.780 - - 0.745 - - 0.743 developmentally regulated GTP binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8767]
27. slit2 ENSDARG00000004246 5277 2.267 - - - - - 0.749 0.751 - 0.767 slit homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010306-3]
28. lima1 lima1 4760 2.259 - - 0.832 - - - 0.706 - 0.721
29. anp32a ENSDARG00000006487 28249 2.233 - - - - - 0.740 0.712 - 0.781 acidic (leucine-rich) nuclear phosphoprotein 32 family, member A [Source:ZFIN;Acc:ZDB-GENE-030131-7850]
30. ctnna1 ENSDARG00000102441 7984 2.232 - 0.768 0.737 - - 0.727 - - - catenin (cadherin-associated protein), alpha 1 [Source:ZFIN;Acc:ZDB-GENE-991207-24]
31. arid4a ENSDARG00000043873 4176 2.23 - - - - 0.739 - 0.717 - 0.774 AT rich interactive domain 4A (RBP1-like) [Source:ZFIN;Acc:ZDB-GENE-050809-105]
32. ssbp3b ENSDARG00000030155 7163 2.198 - - - - - 0.712 0.705 - 0.781 single stranded DNA binding protein 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2801]
33. tet2 ENSDARG00000076928 2190 2.184 - - - - - 0.722 0.704 - 0.758 tet methylcytosine dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-090312-98]
34. ik ENSDARG00000004161 3132 2.14 0.718 - - 0.702 - - - - 0.720 IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
35. tfap4 ENSDARG00000103923 2203 1.809 - - 0.890 - 0.919 - - - - transcription factor AP-4 (activating enhancer binding protein 4) [Source:ZFIN;Acc:ZDB-GENE-090810-1]
36. ddx27 ENSDARG00000091831 1471 1.8 - - 0.888 - 0.912 - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:ZFIN;Acc:ZDB-GENE-031001-8]
37. ttc3 ENSDARG00000086075 2157 1.798 - - 0.868 - 0.930 - - - - tetratricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-090313-3]
38. TUBGCP6 1991 1.793 - - 0.849 - 0.944 - - - - tubulin, gamma complex associated protein 6
39. mgaa ENSDARG00000078784 1344 1.776 - - 0.870 - 0.906 - - - - MGA, MAX dimerization protein a [Source:ZFIN;Acc:ZDB-GENE-030603-1]
40. amotl2a ENSDARG00000061923 4713 1.755 - - - - 0.938 - 0.817 - - angiomotin like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-9770]
41. rbm39b ENSDARG00000041853 1421 1.754 - - 0.857 - 0.897 - - - - RNA binding motif protein 39b [Source:ZFIN;Acc:ZDB-GENE-050327-97]
42. GTSE1 ENSDARG00000013719 1115 1.749 - - 0.838 - 0.911 - - - - G-2 and S-phase expressed 1 [Source:ZFIN;Acc:ZDB-GENE-050522-493]
43. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 1.74 - - - - 0.913 - - - 0.827 ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
44. si:ch211-288g17.3 ENSDARG00000070959 2425 1.735 - - - - 0.941 - - - 0.794 si:ch211-288g17.3 [Source:ZFIN;Acc:ZDB-GENE-030131-461]
45. pak2b ENSDARG00000018476 4331 1.724 - 0.807 - - 0.917 - - - - p21 protein (Cdc42/Rac)-activated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3759]
46. ctsf ENSDARG00000063095 4564 1.722 - - 0.829 - 0.893 - - - - cathepsin F [Source:ZFIN;Acc:ZDB-GENE-030131-9831]
47. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 1.72 - 0.825 0.895 - - - - - - PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
48. ehmt1b ENSDARG00000026634, ENSDARG00000116921 1261 1.716 - - - - 0.919 - - - 0.797 euchromatic histone-lysine N-methyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-080515-3]
49. nrn1a ENSDARG00000071860 1311 1.715 - - - - 0.926 - - - 0.789 neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
50. sipa1l2 ENSDARG00000061640 4545 1.712 - - 0.897 - - 0.815 - - - signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
51. ccdc85ca ENSDARG00000005232 3218 1.712 - - 0.879 - - 0.833 - - - coiled-coil domain containing 85C, a [Source:ZFIN;Acc:ZDB-GENE-060825-198]
52. ttll4 ENSDARG00000078935 1663 1.705 - 0.757 - - 0.948 - - - - tubulin tyrosine ligase-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-070912-313]
53. mycla ENSDARG00000006003 1866 1.704 - - - - 0.957 0.747 - - - MYCL proto-oncogene, bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-040426-2439]
54. PCBP4 ENSDARG00000024276 3194 1.698 - - 0.880 - 0.818 - - - - poly(rC) binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2122]
55. GTSF1L GTSF1L 2089 1.697 - 0.834 - - 0.863 - - - -
56. g6pd ENSDARG00000071065, ENSDARG00000111009 1618 1.696 - 0.832 - - 0.864 - - - - glucose-6-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070508-4]
57. eri1 ENSDARG00000044692, ENSDARG00000110387, ENSDARG00000116810 667 1.695 - 0.731 - - 0.964 - - - - exoribonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-050522-39]
58. zranb2 ENSDARG00000044332 6723 1.682 - 0.807 0.875 - - - - - - zinc finger, RAN-binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2743]
59. AGAP1 ENSDARG00000062123, ENSDARG00000113863 2842 1.677 - 0.799 - - 0.878 - - - - ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 [Source:ZFIN;Acc:ZDB-GENE-130405-1]
60. gad2 ENSDARG00000015537 724 1.675 - - - - 0.924 - - - 0.751 glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
61. matr3l1.1 ENSDARG00000000394, ENSDARG00000001162 3757 1.673 - - - - 0.849 0.824 - - - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
62. st8sia2 ENSDARG00000018788 2183 1.671 - - - - 0.863 - - - 0.808 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
63. LPL_1 LPL_1 1150 1.67 - - - - 0.938 - - - 0.732
64. GIGYF1_1 GIGYF1_1 1865 1.668 - - 0.895 - - - - 0.773 -
65. KBTBD2 ENSDARG00000087226 707 1.664 - - - - 0.899 0.765 - - - kelch repeat and BTB (POZ) domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1262]
66. xpo1b ENSDARG00000063229 2529 1.664 - - 0.841 - 0.823 - - - - exportin 1 (CRM1 homolog, yeast) b [Source:ZFIN;Acc:ZDB-GENE-070530-6]
67. cyb5b ENSDARG00000099774 1224 1.661 - 0.725 - - 0.936 - - - - cytochrome b5 type B [Source:ZFIN;Acc:ZDB-GENE-040426-2614]
68. tial1 ENSDARG00000009525 1856 1.659 - - 0.863 - - 0.796 - - - TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1547]
69. mn1b ENSDARG00000079248 882 1.653 - - - - 0.917 0.736 - - - meningioma 1b [Source:ZFIN;Acc:ZDB-GENE-080917-23]
70. rprd1b ENSDARG00000038113 1105 1.653 - 0.744 - - 0.909 - - - - regulation of nuclear pre-mRNA domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-030131-355]
71. hnrnpk ENSDARG00000018914 8841 1.651 - - 0.852 - - - 0.799 - - heterogeneous nuclear ribonucleoprotein K [Source:ZFIN;Acc:ZDB-GENE-040426-1926]
72. dock7 ENSDARG00000078675 1995 1.648 - - - - 0.888 - - - 0.760 dedicator of cytokinesis 7 [Source:ZFIN;Acc:ZDB-GENE-050302-15]
73. zgc:114130 ENSDARG00000040725, ENSDARG00000116854 806 1.648 - - - - 0.937 0.711 - - - zgc:114130 [Source:ZFIN;Acc:ZDB-GENE-050913-48]
74. C8H5orf51 C8H5orf51 1199 1.641 - 0.734 - - 0.907 - - - -
75. ZNF337_25 ZNF337_25 1713 1.64 - - - - 0.913 0.727 - - -
76. sdc4 ENSDARG00000059906 10105 1.638 - - 0.877 - - - 0.761 - - syndecan 4 [Source:ZFIN;Acc:ZDB-GENE-061111-1]
77. pcdh18b ENSDARG00000052494, ENSDARG00000116134 1099 1.634 - - - - 0.913 - - - 0.721 protocadherin 18b [Source:ZFIN;Acc:ZDB-GENE-080804-1]
78. cdc34b ENSDARG00000012627 3879 1.633 - - - - - - 0.834 - 0.799 cell division cycle 34 homolog (S. cerevisiae) b [Source:ZFIN;Acc:ZDB-GENE-040718-439]
79. chuk ENSDARG00000011662 1668 1.633 - - - - 0.862 0.771 - - - conserved helix-loop-helix ubiquitous kinase [Source:ZFIN;Acc:ZDB-GENE-040426-1069]
80. gdi1 ENSDARG00000056122 4106 1.631 - - - - 0.835 - - - 0.796 GDP dissociation inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-504]
81. MSL1_1 MSL1_1 2365 1.631 - - 0.856 - 0.775 - - - -
82. hes6 ENSDARG00000019335 4754 1.63 - - 0.873 - - 0.757 - - - hes family bHLH transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-030828-5]
83. usp49 ENSDARG00000000229 706 1.63 - - - - 0.909 - - - 0.721 ubiquitin specific peptidase 49 [Source:ZFIN;Acc:ZDB-GENE-050208-484]
84. mtmr2 ENSDARG00000004616 1052 1.63 - 0.722 - - 0.908 - - - - myotubularin related protein 2 [Source:ZFIN;Acc:ZDB-GENE-990715-14]
85. mapk3 ENSDARG00000070573 6842 1.628 - 0.745 - - 0.883 - - - - mitogen-activated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-040121-1]
86. dicer1 ENSDARG00000001129, ENSDARG00000109655 1811 1.626 - - - - - 0.813 0.813 - - dicer 1, ribonuclease type III [Source:ZFIN;Acc:ZDB-GENE-030131-3445]
87. tcta ENSDARG00000044194 1183 1.623 - - - - 0.899 0.724 - - - T cell leukemia translocation altered [Source:ZFIN;Acc:ZDB-GENE-040718-325]
88. cd99l2 ENSDARG00000056722 5036 1.623 - - - - - 0.751 - - 0.872 CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
89. PGAP3 ENSDARG00000057531, ENSDARG00000112574 2046 1.622 - - - - 0.907 - - - 0.715 post-GPI attachment to proteins 3 [Source:ZFIN;Acc:ZDB-GENE-080204-27]
90. adnp2b ENSDARG00000028431 4683 1.622 - - 0.872 - - - 0.750 - - ADNP homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5930]
91. srsf6b ENSDARG00000016783 9926 1.617 - - - - - 0.756 - - 0.861 serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
92. aco1 ENSDARG00000026376 5034 1.615 - - - - 0.867 - 0.748 - - aconitase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-031118-76]
93. eif4h ENSDARG00000042252 6742 1.612 - 0.736 0.876 - - - - - - eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
94. ppm1da ENSDARG00000009273 7713 1.612 - - - - - - 0.822 - 0.790 protein phosphatase, Mg2+/Mn2+ dependent, 1Da [Source:ZFIN;Acc:ZDB-GENE-040426-815]
95. rnd1l rnd1l 984 1.607 - - 0.863 - - 0.744 - - -
96. si:dkey-19e4.5 ENSDARG00000089886 2562 1.607 - 0.827 - - - - - - 0.780 si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
97. med19a ENSDARG00000037392, ENSDARG00000114246 2231 1.606 - 0.725 0.881 - - - - - - mediator complex subunit 19a [Source:ZFIN;Acc:ZDB-GENE-060929-232]
98. wu:fj29h11 ENSDARG00000096562 863 1.605 - - - - 0.884 - - - 0.721 wu:fj29h11 [Source:ZFIN;Acc:ZDB-GENE-030131-7558]
99. yme1l1a ENSDARG00000075192 2634 1.605 - - - - 0.875 0.730 - - - YME1-like 1a [Source:ZFIN;Acc:ZDB-GENE-091113-41]
100. ube2f ENSDARG00000025754 1946 1.603 - - - - 0.903 0.700 - - - ubiquitin-conjugating enzyme E2F (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2557]

There are 1828 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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